RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 YWHAZP63104 245 aaKnown RBP23.81■■□□□ 1.4
TDP1-206ENST00000553569 EFHC1Q5JVL4 640 aa23.81■■□□□ 1.4
TDP1-206ENST00000553569 SYPL2Q5VXT5 272 aa23.81■■□□□ 1.4
TDP1-206ENST00000553569 RHBDF2Q6PJF5 856 aa23.81■■□□□ 1.4
TDP1-206ENST00000553569 TRIM72Q6ZMU5 477 aa23.81■■□□□ 1.4
TDP1-206ENST00000553569 DENND1CQ8IV53 801 aa23.81■■□□□ 1.4
TDP1-206ENST00000553569 ADAM32Q8TC27 787 aa23.81■■□□□ 1.4
TDP1-206ENST00000553569 C18orf8Q96DM3 657 aa23.81■■□□□ 1.4
TDP1-206ENST00000553569 PCDHB18PQ96TA0 734 aa23.81■■□□□ 1.4
TDP1-206ENST00000553569 DCLK3Q9C098 648 aa23.81■■□□□ 1.4
TDP1-206ENST00000553569 RAPGEFL1Q9UHV5 662 aa23.81■■□□□ 1.4
TDP1-206ENST00000553569 HCN4Q9Y3Q4 1203 aa23.81■■□□□ 1.4
TDP1-206ENST00000553569 NCAM2O15394 837 aa23.8■■□□□ 1.4
TDP1-206ENST00000553569 CBFA2T2O43439 604 aa23.8■■□□□ 1.4
TDP1-206ENST00000553569 HSF2BPO75031 334 aa23.8■■□□□ 1.4
TDP1-206ENST00000553569 CYP1A1P04798 512 aaPredicted RBP23.8■■□□□ 1.4
TDP1-206ENST00000553569 SLC6A3Q01959 620 aa23.8■■□□□ 1.4
TDP1-206ENST00000553569 TRIP4Q15650 581 aaPredicted RBP23.8■■□□□ 1.4
TDP1-206ENST00000553569 GAB4Q2WGN9 574 aa23.8■■□□□ 1.4
TDP1-206ENST00000553569 ANO4Q32M45 955 aa23.8■■□□□ 1.4
TDP1-206ENST00000553569 FIGNQ5HY92 759 aa23.8■■□□□ 1.4
TDP1-206ENST00000553569 SFMBT2Q5VUG0 894 aa23.8■■□□□ 1.4
TDP1-206ENST00000553569 E4F1Q66K89 784 aaPredicted RBP23.8■■□□□ 1.4
TDP1-206ENST00000553569 TPGS1Q6ZTW0 290 aa23.8■■□□□ 1.4
TDP1-206ENST00000553569 TAC4Q86UU9 113 aa23.8■■□□□ 1.4
TDP1-206ENST00000553569 ZNF687Q8N1G0 1237 aa23.8■■□□□ 1.4
TDP1-206ENST00000553569 SLC30A5Q8TAD4 765 aa23.8■■□□□ 1.4
TDP1-206ENST00000553569 AGPAT1Q99943 283 aa23.8■■□□□ 1.4
TDP1-206ENST00000553569 P2RY13Q9BPV8 354 aa23.8■■□□□ 1.4
TDP1-206ENST00000553569 NUP58Q9BVL2 599 aa23.8■■□□□ 1.4
TDP1-206ENST00000553569 SPHK2Q9NRA0 654 aa23.8■■□□□ 1.4
TDP1-206ENST00000553569 RBM12Q9NTZ6 932 aaKnown RBP23.8■■□□□ 1.4
TDP1-206ENST00000553569 ASNSD1Q9NWL6 643 aa23.8■■□□□ 1.4
TDP1-206ENST00000553569 DLGAP2Q9P1A6 1054 aa23.8■■□□□ 1.4
TDP1-206ENST00000553569 AGO1Q9UL18 857 aaKnown RBP23.8■■□□□ 1.4
TDP1-206ENST00000553569 ZNF510Q9Y2H8 683 aa23.8■■□□□ 1.4
TDP1-206ENST00000553569 GOLGA8SH3BPF8 625 aa23.79■■□□□ 1.4
TDP1-206ENST00000553569 GLI1P08151 1106 aa23.79■■□□□ 1.4
TDP1-206ENST00000553569 COL9A1P20849 921 aa23.79■■□□□ 1.4
TDP1-206ENST00000553569 HARS2P49590 506 aaKnown RBP23.79■■□□□ 1.4
TDP1-206ENST00000553569 TBX4P57082 545 aa23.79■■□□□ 1.4
TDP1-206ENST00000553569 DCAF6Q58WW2 860 aa23.79■■□□□ 1.4
TDP1-206ENST00000553569 FAM102AQ5T9C2 384 aaPredicted RBP23.79■■□□□ 1.4
TDP1-206ENST00000553569 MMS22LQ6ZRQ5 1243 aa23.79■■□□□ 1.4
TDP1-206ENST00000553569 BEND5Q7L4P6 421 aa23.79■■□□□ 1.4
TDP1-206ENST00000553569 SLC26A9Q7LBE3 791 aa23.79■■□□□ 1.4
TDP1-206ENST00000553569 IRF2BP2Q7Z5L9 587 aa23.79■■□□□ 1.4
TDP1-206ENST00000553569 XYLT1Q86Y38 959 aa23.79■■□□□ 1.4
TDP1-206ENST00000553569 TMEM25Q86YD3 366 aa23.79■■□□□ 1.4
TDP1-206ENST00000553569 ZDHHC17Q8IUH5 632 aa23.79■■□□□ 1.4
TDP1-206ENST00000553569 DEFB106AQ8N104 65 aa23.79■■□□□ 1.4
TDP1-206ENST00000553569 DTWD2Q8NBA8 298 aa23.79■■□□□ 1.4
TDP1-206ENST00000553569 CPLX3Q8WVH0 158 aa23.79■■□□□ 1.4
TDP1-206ENST00000553569 CD101Q93033 1021 aa23.79■■□□□ 1.4
TDP1-206ENST00000553569 SERPINB11Q96P15 392 aa23.79■■□□□ 1.4
TDP1-206ENST00000553569 EDEM3Q9BZQ6 932 aa23.79■■□□□ 1.4
TDP1-206ENST00000553569 LMAN1LQ9HAT1 526 aa23.79■■□□□ 1.4
TDP1-206ENST00000553569 TRDMT1O14717 391 aaKnown RBP23.78■■□□□ 1.4
TDP1-206ENST00000553569 DAB1O75553 588 aa23.78■■□□□ 1.4
TDP1-206ENST00000553569 CHRNB1P11230 501 aa23.78■■□□□ 1.4
TDP1-206ENST00000553569 GABRB2P47870 512 aa23.78■■□□□ 1.4
TDP1-206ENST00000553569 GALK1P51570 392 aa23.78■■□□□ 1.4
TDP1-206ENST00000553569 PITX1P78337 314 aaPredicted RBP23.78■■□□□ 1.4
TDP1-206ENST00000553569 GAD2Q05329 585 aa23.78■■□□□ 1.4
TDP1-206ENST00000553569 GRSF1Q12849 480 aaKnown RBP eCLIP23.78■■□□□ 1.4
TDP1-206ENST00000553569 FZD5Q13467 585 aa23.78■■□□□ 1.4
TDP1-206ENST00000553569 LRRC32Q14392 662 aa23.78■■□□□ 1.4
TDP1-206ENST00000553569 CLEC16AQ2KHT3 1053 aa23.78■■□□□ 1.4
TDP1-206ENST00000553569 FSTL4Q6MZW2 842 aa23.78■■□□□ 1.4
TDP1-206ENST00000553569 C12orf40Q86WS4 652 aa23.78■■□□□ 1.4
TDP1-206ENST00000553569 BHMTQ93088 406 aa23.78■■□□□ 1.4
TDP1-206ENST00000553569 SLC2A13Q96QE2 648 aa23.78■■□□□ 1.4
TDP1-206ENST00000553569 C11orf70Q9BRQ4 267 aa23.78■■□□□ 1.4
TDP1-206ENST00000553569 FAM204AQ9H8W3 233 aa23.78■■□□□ 1.4
TDP1-206ENST00000553569 SYNJ2BP-COX16A0A087WUM0 186 aa23.77■■□□□ 1.4
TDP1-206ENST00000553569 NEDD8-MDP1E9PL57 170 aa23.77■■□□□ 1.4
TDP1-206ENST00000553569 OPRD1P41143 372 aa23.77■■□□□ 1.4
TDP1-206ENST00000553569 NSFP46459 744 aaKnown RBP23.77■■□□□ 1.4
TDP1-206ENST00000553569 RNASE9P60153 205 aaKnown RBP23.77■■□□□ 1.4
TDP1-206ENST00000553569 TMEM196Q5HYL7 178 aa23.77■■□□□ 1.4
TDP1-206ENST00000553569 PHLDB2Q86SQ0 1253 aa23.77■■□□□ 1.4
TDP1-206ENST00000553569 NAT16Q8N8M0 369 aa23.77■■□□□ 1.4
TDP1-206ENST00000553569 EXOC4Q96A65 974 aa23.77■■□□□ 1.4
TDP1-206ENST00000553569 CLDN23Q96B33 292 aa23.77■■□□□ 1.4
TDP1-206ENST00000553569 BBS2Q9BXC9 721 aa23.77■■□□□ 1.4
TDP1-206ENST00000553569 FBRSL1Q9HCM7 1045 aaKnown RBP23.77■■□□□ 1.4
TDP1-206ENST00000553569 COX16Q9P0S2 106 aa23.77■■□□□ 1.4
TDP1-206ENST00000553569 KIAA1549LQ6ZVL6 1849 aa23.77■■□□□ 1.4
TDP1-206ENST00000553569 A0A1W2PQJ5 194 aa23.76■■□□□ 1.39
TDP1-206ENST00000553569 HOXC11O43248 304 aaPredicted RBP23.76■■□□□ 1.39
TDP1-206ENST00000553569 TRUB2O95900 331 aaKnown RBP23.76■■□□□ 1.39
TDP1-206ENST00000553569 EGFP01133 1207 aa23.76■■□□□ 1.39
TDP1-206ENST00000553569 IGLV3-27P01718 113 aa23.76■■□□□ 1.39
TDP1-206ENST00000553569 UNGP13051 313 aaPredicted RBP23.76■■□□□ 1.39
TDP1-206ENST00000553569 MMP8P22894 467 aa23.76■■□□□ 1.39
TDP1-206ENST00000553569 SLC6A11P48066 632 aa23.76■■□□□ 1.39
TDP1-206ENST00000553569 CDK17Q00537 523 aa23.76■■□□□ 1.39
TDP1-206ENST00000553569 KDSRQ06136 332 aa23.76■■□□□ 1.39
TDP1-206ENST00000553569 NUGGCQ68CJ6 796 aa23.76■■□□□ 1.39
TDP1-206ENST00000553569 ZNF397Q8NF99 534 aaPredicted RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms