RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 TSPAN3O60637 253 aa19.08■□□□□ 0.64
SHMT2-206ENST00000553529 PAEPP09466 180 aa19.08■□□□□ 0.64
SHMT2-206ENST00000553529 EIF2DP41214 584 aaKnown RBP19.08■□□□□ 0.64
SHMT2-206ENST00000553529 YWHAEP62258 255 aaKnown RBP19.08■□□□□ 0.64
SHMT2-206ENST00000553529 ARHGAP44Q17R89 818 aa19.08■□□□□ 0.64
SHMT2-206ENST00000553529 PLK5Q496M5 336 aa19.08■□□□□ 0.64
SHMT2-206ENST00000553529 BTBD8Q5XKL5 378 aa19.08■□□□□ 0.64
SHMT2-206ENST00000553529 GRAMD4Q6IC98 578 aa19.08■□□□□ 0.64
SHMT2-206ENST00000553529 KIAA1211LQ6NV74 962 aa19.08■□□□□ 0.64
SHMT2-206ENST00000553529 TRIM65Q6PJ69 517 aa19.08■□□□□ 0.64
SHMT2-206ENST00000553529 ZNF513Q8N8E2 541 aaPredicted RBP19.08■□□□□ 0.64
SHMT2-206ENST00000553529 GPT2Q8TD30 523 aa19.08■□□□□ 0.64
SHMT2-206ENST00000553529 MYEOVQ96EZ4 313 aa19.08■□□□□ 0.64
SHMT2-206ENST00000553529 PIWIL1Q96J94 861 aaKnown RBP19.08■□□□□ 0.64
SHMT2-206ENST00000553529 IPO9Q96P70 1041 aaKnown RBP19.08■□□□□ 0.64
SHMT2-206ENST00000553529 SIX2Q9NPC8 291 aa19.08■□□□□ 0.64
SHMT2-206ENST00000553529 LSM7Q9UK45 103 aaKnown RBP19.08■□□□□ 0.64
SHMT2-206ENST00000553529 GOLGA6L7A0A1B0GV03 622 aa19.07■□□□□ 0.64
SHMT2-206ENST00000553529 TCRBV21S2A2A0A5A6 115 aa19.07■□□□□ 0.64
SHMT2-206ENST00000553529 MED19A0JLT2 244 aaPredicted RBP19.07■□□□□ 0.64
SHMT2-206ENST00000553529 P4HA2O15460 535 aa19.07■□□□□ 0.64
SHMT2-206ENST00000553529 GNA14O95837 355 aa19.07■□□□□ 0.64
SHMT2-206ENST00000553529 FYNP06241 537 aa19.07■□□□□ 0.64
SHMT2-206ENST00000553529 RETP07949 1114 aa19.07■□□□□ 0.64
SHMT2-206ENST00000553529 PSEN1P49768 467 aa19.07■□□□□ 0.64
SHMT2-206ENST00000553529 MRPS21P82921 87 aaKnown RBP19.07■□□□□ 0.64
SHMT2-206ENST00000553529 GCNT1Q02742 428 aa19.07■□□□□ 0.64
SHMT2-206ENST00000553529 GEN1Q17RS7 908 aa19.07■□□□□ 0.64
SHMT2-206ENST00000553529 RASSF3Q86WH2 238 aa19.07■□□□□ 0.64
SHMT2-206ENST00000553529 SIX6OS1Q8N1H7 587 aa19.07■□□□□ 0.64
SHMT2-206ENST00000553529 CAMKK1Q8N5S9 505 aa19.07■□□□□ 0.64
SHMT2-206ENST00000553529 DEFB119Q8N690 84 aa19.07■□□□□ 0.64
SHMT2-206ENST00000553529 HMGB4Q8WW32 186 aa19.07■□□□□ 0.64
SHMT2-206ENST00000553529 SORCS1Q8WY21 1168 aa19.07■□□□□ 0.64
SHMT2-206ENST00000553529 KCTD13Q8WZ19 329 aa19.07■□□□□ 0.64
SHMT2-206ENST00000553529 MARK1Q9P0L2 795 aa19.07■□□□□ 0.64
SHMT2-206ENST00000553529 RALGAPA1Q6GYQ0 2036 aa19.07■□□□□ 0.64
SHMT2-206ENST00000553529 MYO18AQ92614 2054 aaKnown RBP19.06■□□□□ 0.64
SHMT2-206ENST00000553529 LETM1O95202 739 aaPredicted RBP19.06■□□□□ 0.64
SHMT2-206ENST00000553529 SETSIPP0DME0 302 aa19.06■□□□□ 0.64
SHMT2-206ENST00000553529 CNR2P34972 360 aa19.06■□□□□ 0.64
SHMT2-206ENST00000553529 ANP32AP39687 249 aaKnown RBP19.06■□□□□ 0.64
SHMT2-206ENST00000553529 PITX1P78337 314 aaPredicted RBP19.06■□□□□ 0.64
SHMT2-206ENST00000553529 CNGA2Q16280 664 aa19.06■□□□□ 0.64
SHMT2-206ENST00000553529 DPY19L2P1Q6NXN4 242 aa19.06■□□□□ 0.64
SHMT2-206ENST00000553529 ARMCX6Q7L4S7 300 aa19.06■□□□□ 0.64
SHMT2-206ENST00000553529 PASD1Q8IV76 773 aa19.06■□□□□ 0.64
SHMT2-206ENST00000553529 ADAM32Q8TC27 787 aa19.06■□□□□ 0.64
SHMT2-206ENST00000553529 NUP62CLQ9H1M0 184 aa19.06■□□□□ 0.64
SHMT2-206ENST00000553529 SAMSN1Q9NSI8 373 aaKnown RBP19.06■□□□□ 0.64
SHMT2-206ENST00000553529 CACNA2D2Q9NY47 1150 aa19.06■□□□□ 0.64
SHMT2-206ENST00000553529 EBF1Q9UH73 591 aa19.06■□□□□ 0.64
SHMT2-206ENST00000553529 MBD1Q9UIS9 605 aaPredicted RBP19.06■□□□□ 0.64
SHMT2-206ENST00000553529 CNTN6Q9UQ52 1028 aa19.06■□□□□ 0.64
SHMT2-206ENST00000553529 SPTBN4Q9H254 2564 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.05■□□□□ 0.64
SHMT2-206ENST00000553529 A0A1W2PQF6 199 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 DCDC2BA2VCK2 349 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.05■□□□□ 0.64
SHMT2-206ENST00000553529 PENKP01210 267 aaPredicted RBP19.05■□□□□ 0.64
SHMT2-206ENST00000553529 PON1P27169 355 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 GBP1P32455 592 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 USP8P40818 1118 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 GPD2P43304 727 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 TNFRSF4P43489 277 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 MTIF2P46199 727 aaKnown RBP19.05■□□□□ 0.64
SHMT2-206ENST00000553529 DGKGP49619 791 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 SLC8A3P57103 927 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 GOLGA8FQ08AF8 430 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 GOLGA8DPQ0D2H9 430 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 TRIP4Q15650 581 aaPredicted RBP19.05■□□□□ 0.64
SHMT2-206ENST00000553529 MIIPQ5JXC2 388 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 TMEM215Q68D42 235 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 PRR23CQ6ZRP0 262 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 CACNA2D4Q7Z3S7 1137 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 SCUBE3Q8IX30 993 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 ABCA7Q8IZY2 2146 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 ZNF276Q8N554 614 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 WFDC5Q8TCV5 224 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 EXOC4Q96A65 974 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 DNAI2Q9GZS0 605 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 CD248Q9HCU0 757 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 PLCB1Q9NQ66 1216 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 NAALADL1Q9UQQ1 740 aa19.05■□□□□ 0.64
SHMT2-206ENST00000553529 CCDC163A0A0D9SF12 145 aa19.04■□□□□ 0.64
SHMT2-206ENST00000553529 PATE3B3GLJ2 98 aa19.04■□□□□ 0.64
SHMT2-206ENST00000553529 EPN2O95208 641 aa19.04■□□□□ 0.64
SHMT2-206ENST00000553529 GABRG2P18507 467 aa19.04■□□□□ 0.64
SHMT2-206ENST00000553529 SLC6A4P31645 630 aa19.04■□□□□ 0.64
SHMT2-206ENST00000553529 NUMBP49757 651 aa19.04■□□□□ 0.64
SHMT2-206ENST00000553529 ATXN1P54253 815 aaKnown RBP19.04■□□□□ 0.64
SHMT2-206ENST00000553529 MFAP3P55082 362 aa19.04■□□□□ 0.64
SHMT2-206ENST00000553529 TAF5Q15542 800 aa19.04■□□□□ 0.64
SHMT2-206ENST00000553529 RFWD3Q6PCD5 774 aa19.04■□□□□ 0.64
SHMT2-206ENST00000553529 FAM124BQ9H5Z6 455 aaPredicted RBP19.04■□□□□ 0.64
SHMT2-206ENST00000553529 CNGB3Q9NQW8 809 aa19.04■□□□□ 0.64
SHMT2-206ENST00000553529 ST7Q9NRC1 585 aa19.04■□□□□ 0.64
SHMT2-206ENST00000553529 DLL3Q9NYJ7 618 aa19.04■□□□□ 0.64
SHMT2-206ENST00000553529 XPO7Q9UIA9 1087 aaKnown RBP19.04■□□□□ 0.64
SHMT2-206ENST00000553529 SPAG17Q6Q759 2223 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms