RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 EIF2B4Q9UI10 523 aaKnown RBP9.57□□□□□ -0.88
SYNE2-209ENST00000553308 FBXO10Q9UK96 956 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 SCML2Q9UQR0 700 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 BTBD3Q9Y2F9 522 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 MORC2Q9Y6X9 1032 aaPredicted RBP9.57□□□□□ -0.88
SYNE2-209ENST00000553308 FREM2Q5SZK8 3169 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 MYH10P35580 1976 aa9.57□□□□□ -0.88
SYNE2-209ENST00000553308 ITPR1Q14643 2758 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 A0A1B0GVT2 93 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 FAM149AA5PLN7 773 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 FLRT2O43155 660 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 EXOC3O60645 756 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 DKK1O94907 266 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 ZIC2O95409 532 aaPredicted RBP9.56□□□□□ -0.88
SYNE2-209ENST00000553308 PENKP01210 267 aaPredicted RBP9.56□□□□□ -0.88
SYNE2-209ENST00000553308 KLKB1P03952 638 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 C4BPAP04003 597 aaKnown RBP9.56□□□□□ -0.88
SYNE2-209ENST00000553308 FAM200BP0CF97 657 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 RARGP13631 454 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 PDCP20941 246 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 ACO1P21399 889 aaKnown RBP9.56□□□□□ -0.88
SYNE2-209ENST00000553308 SYT1P21579 422 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 PRKCHP24723 683 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 COPAP53621 1224 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 SNRPFP62306 86 aaKnown RBP9.56□□□□□ -0.88
SYNE2-209ENST00000553308 EHHADHQ08426 723 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 CYP4F3Q08477 520 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 CUL4AQ13619 759 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 ENPP2Q13822 863 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 BMT2Q1RMZ1 405 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 FYB2Q5VWT5 728 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 IL27RAQ6UWB1 636 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 CLEC20AQ6ZU45 233 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 FAM124AQ86V42 546 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 C12orf56Q8IXR9 622 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 C1orf216Q8TAB5 229 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 SORCS1Q8WY21 1168 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 SNX19Q92543 992 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 PRCCQ92733 491 aaPredicted RBP9.56□□□□□ -0.88
SYNE2-209ENST00000553308 SIPA1Q96FS4 1042 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 TWNKQ96RR1 684 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 LRRC27Q9C0I9 530 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.56□□□□□ -0.88
SYNE2-209ENST00000553308 DKK4Q9UBT3 224 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 DNMT3LQ9UJW3 386 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 SLC27A6Q9Y2P4 619 aa9.56□□□□□ -0.88
SYNE2-209ENST00000553308 ANKRD11Q6UB99 2663 aaPredicted RBP9.56□□□□□ -0.88
SYNE2-209ENST00000553308 NBEAQ8NFP9 2946 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 CKAP5Q14008 2032 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 SYNCRIPO60506 623 aaKnown RBP9.55□□□□□ -0.88
SYNE2-209ENST00000553308 IGLV3-19P01714 112 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 HMBSP08397 361 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 ASPAP45381 313 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 PLA2G4AP47712 749 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 NASPP49321 788 aaPredicted RBP9.55□□□□□ -0.88
SYNE2-209ENST00000553308 CSNK1EP49674 416 aaKnown RBP9.55□□□□□ -0.88
SYNE2-209ENST00000553308 DLG4P78352 724 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 CLDN10P78369 228 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 ZNF234Q14588 700 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 KIF19Q2TAC6 998 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 ERICH6BQ5W0A0 696 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 SPOPLQ6IQ16 392 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 CNNM4Q6P4Q7 775 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 KLHDC10Q6PID8 442 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 LAYNQ6UX15 382 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 DBX2Q6ZNG2 339 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 UNC13DQ70J99 1090 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 ANKS1BQ7Z6G8 1248 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 SCD5Q86SK9 330 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 CRYBG2Q8N1P7 616 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 RBBP8NLQ8NC74 664 aaPredicted RBP9.55□□□□□ -0.88
SYNE2-209ENST00000553308 RHBDD1Q8TEB9 315 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 PARD3BQ8TEW8 1205 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 UCMAQ8WVF2 138 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 CDC6Q99741 560 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 C7orf25Q9BPX7 421 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 BLZF1Q9H2G9 400 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 CUEDC2Q9H467 287 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 C6orf106Q9H6K1 298 aaPredicted RBP9.55□□□□□ -0.88
SYNE2-209ENST00000553308 SLC39A2Q9NP94 309 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 TFIP11Q9UBB9 837 aaKnown RBP9.55□□□□□ -0.88
SYNE2-209ENST00000553308 RASAL2Q9UJF2 1139 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 NAGPAQ9UK23 515 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 CLEC4EQ9ULY5 219 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.55□□□□□ -0.88
SYNE2-209ENST00000553308 PCDHGB2Q9Y5G2 931 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 PCDHA5Q9Y5H7 936 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 APC2O95996 2303 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 TMEM131Q92545 1883 aa9.55□□□□□ -0.88
SYNE2-209ENST00000553308 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.54□□□□□ -0.88
SYNE2-209ENST00000553308 TRABD2BA6NFA1 517 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 EIF4E1BA6NMX2 242 aaKnown RBP9.54□□□□□ -0.88
SYNE2-209ENST00000553308 NPC1O15118 1278 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 EPHX1P07099 455 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 ACADMP11310 421 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 P4HA1P13674 534 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 HLA-EP13747 358 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 OXTRP30559 389 aa9.54□□□□□ -0.88
SYNE2-209ENST00000553308 CORO1AP31146 461 aaKnown RBP9.54□□□□□ -0.88
SYNE2-209ENST00000553308 KIF11P52732 1056 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms