RNA–Protein interactions for RNA: ENST00000552812.1

CACNB3-224, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

Gene CACNB3, Length 1,712 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-224ENST00000552812 TFDP2Q14188 446 aa11.73□□□□□ -0.53
CACNB3-224ENST00000552812 DPYSL3Q14195 570 aa11.73□□□□□ -0.53
CACNB3-224ENST00000552812 KRT81Q14533 505 aa11.73□□□□□ -0.53
CACNB3-224ENST00000552812 LAPTM4AQ15012 233 aa11.73□□□□□ -0.53
CACNB3-224ENST00000552812 MGAT5BQ3V5L5 792 aa11.73□□□□□ -0.53
CACNB3-224ENST00000552812 TMEM240Q5SV17 173 aa11.73□□□□□ -0.53
CACNB3-224ENST00000552812 TPGS2Q68CL5 300 aa11.73□□□□□ -0.53
CACNB3-224ENST00000552812 MTERF4Q7Z6M4 381 aaKnown RBP11.73□□□□□ -0.53
CACNB3-224ENST00000552812 MON1AQ86VX9 555 aa11.73□□□□□ -0.53
CACNB3-224ENST00000552812 C7orf61Q8IZ16 206 aa11.73□□□□□ -0.53
CACNB3-224ENST00000552812 ATL2Q8NHH9 583 aa11.73□□□□□ -0.53
CACNB3-224ENST00000552812 SLC7A14Q8TBB6 771 aa11.73□□□□□ -0.53
CACNB3-224ENST00000552812 PHOSPHO2Q8TCD6 241 aa11.73□□□□□ -0.53
CACNB3-224ENST00000552812 C1orf54Q8WWF1 131 aa11.73□□□□□ -0.53
CACNB3-224ENST00000552812 NTAN1Q96AB6 310 aa11.73□□□□□ -0.53
CACNB3-224ENST00000552812 FAF2Q96CS3 445 aa11.73□□□□□ -0.53
CACNB3-224ENST00000552812 PCDH18Q9HCL0 1135 aa11.73□□□□□ -0.53
CACNB3-224ENST00000552812 CALCOCO1Q9P1Z2 691 aa11.73□□□□□ -0.53
CACNB3-224ENST00000552812 RCOR3Q9P2K3 495 aaPredicted RBP11.73□□□□□ -0.53
CACNB3-224ENST00000552812 AP4E1Q9UPM8 1137 aa11.73□□□□□ -0.53
CACNB3-224ENST00000552812 R3HDM2Q9Y2K5 976 aaKnown RBP11.73□□□□□ -0.53
CACNB3-224ENST00000552812 PCDHB12Q9Y5F1 795 aa11.73□□□□□ -0.53
CACNB3-224ENST00000552812 WDR27A2RRH5 827 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 ZSCAN5CA6NGD5 496 aaPredicted RBP11.72□□□□□ -0.53
CACNB3-224ENST00000552812 CST8O60676 142 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 VNN2O95498 520 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 GAS8O95995 478 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 URODP06132 367 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 GBP1P32455 592 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 TUFMP49411 452 aaKnown RBP11.72□□□□□ -0.53
CACNB3-224ENST00000552812 ATXN1P54253 815 aaKnown RBP11.72□□□□□ -0.53
CACNB3-224ENST00000552812 PITX1P78337 314 aaPredicted RBP11.72□□□□□ -0.53
CACNB3-224ENST00000552812 SCAPQ12770 1279 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 DDR2Q16832 855 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 BEND6Q5SZJ8 279 aaPredicted RBP11.72□□□□□ -0.53
CACNB3-224ENST00000552812 DENND5BQ6ZUT9 1274 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 FAM131BQ86XD5 332 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 FIBCD1Q8N539 461 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 TTC9BQ8N6N2 239 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 CCDC185Q8N715 623 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 ATG4AQ8WYN0 398 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 HERVK_113Q902F9 699 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 NKD2Q969F2 451 aaPredicted RBP11.72□□□□□ -0.53
CACNB3-224ENST00000552812 RNF157Q96PX1 679 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 ERP44Q9BS26 406 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 HTATIP2Q9BUP3 242 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 MAK16Q9BXY0 300 aaKnown RBP11.72□□□□□ -0.53
CACNB3-224ENST00000552812 PRDM16Q9HAZ2 1276 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 FAM114A2Q9NRY5 505 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 PIGVQ9NUD9 493 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 AFF4Q9UHB7 1163 aaKnown RBP11.72□□□□□ -0.53
CACNB3-224ENST00000552812 FZD10Q9ULW2 581 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 KIAA1671Q9BY89 1806 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 MYO16Q9Y6X6 1858 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 APOC4-APOC2K7ER74 178 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 LIASO43766 372 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 IGLV3-25P01717 112 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 APOC2P02655 101 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 LINC00271P0C7V0 271 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 IL4RP24394 825 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 L1CAMP32004 1257 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 OR1D2P34982 312 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 EPHB4P54760 987 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 CREMQ03060 361 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 KRT17Q04695 432 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 DUSP4Q13115 394 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 NME3Q13232 169 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 BYSLQ13895 437 aaKnown RBP11.72□□□□□ -0.53
CACNB3-224ENST00000552812 ARL13BQ3SXY8 428 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 ZC3H12AQ5D1E8 599 aaKnown RBP11.72□□□□□ -0.53
CACNB3-224ENST00000552812 BTBD8Q5XKL5 378 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 DUPD1Q68J44 220 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 SND1Q7KZF4 910 aaKnown RBP eCLIP11.72□□□□□ -0.53
CACNB3-224ENST00000552812 RFX6Q8HWS3 928 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 ANKK1Q8NFD2 765 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 ZNF461Q8TAF7 563 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.72□□□□□ -0.53
CACNB3-224ENST00000552812 DQX1Q8TE96 717 aaKnown RBP11.72□□□□□ -0.53
CACNB3-224ENST00000552812 CASKIN2Q8WXE0 1202 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 EDEM1Q92611 657 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 CLP1Q92989 425 aaKnown RBP11.72□□□□□ -0.53
CACNB3-224ENST00000552812 SEPT5Q99719 369 aaPredicted RBP11.72□□□□□ -0.53
CACNB3-224ENST00000552812 CLSTN3Q9BQT9 956 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 MTIF3Q9H2K0 278 aaKnown RBP11.72□□□□□ -0.53
CACNB3-224ENST00000552812 CRISPLD1Q9H336 500 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 SMOC2Q9H3U7 446 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 FAM204AQ9H8W3 233 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 WDR6Q9NNW5 1121 aaKnown RBP11.72□□□□□ -0.53
CACNB3-224ENST00000552812 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.72□□□□□ -0.53
CACNB3-224ENST00000552812 DDIT4Q9NX09 232 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 MAFFQ9ULX9 164 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 DRG1Q9Y295 367 aaKnown RBP11.72□□□□□ -0.53
CACNB3-224ENST00000552812 SSX2IPQ9Y2D8 614 aa11.72□□□□□ -0.53
CACNB3-224ENST00000552812 ESYT3A0FGR9 886 aa11.71□□□□□ -0.54
CACNB3-224ENST00000552812 ADAM12O43184 909 aa11.71□□□□□ -0.54
CACNB3-224ENST00000552812 ATP8B1O43520 1251 aa11.71□□□□□ -0.54
CACNB3-224ENST00000552812 ABLIM3O94929 683 aa11.71□□□□□ -0.54
CACNB3-224ENST00000552812 MYBL2P10244 700 aa11.71□□□□□ -0.54
CACNB3-224ENST00000552812 ATF2P15336 505 aa11.71□□□□□ -0.54
CACNB3-224ENST00000552812 ZFXP17010 805 aaPredicted RBP11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms