RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 KDM7AQ6ZMT4 941 aa15.27■□□□□ 0.04
VPS29-209ENST00000551655 HTR3DQ70Z44 454 aa15.27■□□□□ 0.04
VPS29-209ENST00000551655 ZNF248Q8NDW4 579 aa15.27■□□□□ 0.04
VPS29-209ENST00000551655 PDZD8Q8NEN9 1154 aa15.27■□□□□ 0.04
VPS29-209ENST00000551655 OR5B17Q8NGF7 314 aa15.27■□□□□ 0.04
VPS29-209ENST00000551655 CACTINQ8WUQ7 758 aaKnown RBP15.27■□□□□ 0.04
VPS29-209ENST00000551655 TSC1Q92574 1164 aa15.27■□□□□ 0.04
VPS29-209ENST00000551655 MED8Q96G25 268 aa15.27■□□□□ 0.04
VPS29-209ENST00000551655 HPDLQ96IR7 371 aa15.27■□□□□ 0.04
VPS29-209ENST00000551655 DUSP9Q99956 384 aaKnown RBP15.27■□□□□ 0.04
VPS29-209ENST00000551655 WDR35Q9P2L0 1181 aa15.27■□□□□ 0.04
VPS29-209ENST00000551655 NXF1Q9UBU9 619 aaKnown RBP15.27■□□□□ 0.04
VPS29-209ENST00000551655 PCDHB1Q9Y5F3 818 aa15.27■□□□□ 0.04
VPS29-209ENST00000551655 VWA3AA6NCI4 1184 aa15.26■□□□□ 0.03
VPS29-209ENST00000551655 LAD1O00515 517 aa15.26■□□□□ 0.03
VPS29-209ENST00000551655 EPB41L2O43491 1005 aaKnown RBP15.26■□□□□ 0.03
VPS29-209ENST00000551655 KRT18P05783 430 aaKnown RBP15.26■□□□□ 0.03
VPS29-209ENST00000551655 ITGAVP06756 1048 aa15.26■□□□□ 0.03
VPS29-209ENST00000551655 TMEM191BP0C7N4 346 aa15.26■□□□□ 0.03
VPS29-209ENST00000551655 ACO1P21399 889 aaKnown RBP15.26■□□□□ 0.03
VPS29-209ENST00000551655 DDIT3P35638 169 aa15.26■□□□□ 0.03
VPS29-209ENST00000551655 MFAP3P55082 362 aa15.26■□□□□ 0.03
VPS29-209ENST00000551655 CDH8P55286 799 aa15.26■□□□□ 0.03
VPS29-209ENST00000551655 POU5F1Q01860 360 aaKnown RBP15.26■□□□□ 0.03
VPS29-209ENST00000551655 ORC1Q13415 861 aa15.26■□□□□ 0.03
VPS29-209ENST00000551655 MCM6Q14566 821 aa15.26■□□□□ 0.03
VPS29-209ENST00000551655 SLC6A18Q96N87 628 aa15.26■□□□□ 0.03
VPS29-209ENST00000551655 MMS19Q96T76 1030 aa15.26■□□□□ 0.03
VPS29-209ENST00000551655 KLF16Q9BXK1 252 aaPredicted RBP15.26■□□□□ 0.03
VPS29-209ENST00000551655 OSGEPQ9NPF4 335 aa15.26■□□□□ 0.03
VPS29-209ENST00000551655 BLOC1S4Q9NUP1 217 aa15.26■□□□□ 0.03
VPS29-209ENST00000551655 MDM4O15151 490 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 KLK10O43240 276 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 TLR5O60602 858 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 TSPAN3O60637 253 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 TBCAO75347 108 aaKnown RBP15.25■□□□□ 0.03
VPS29-209ENST00000551655 SEMA4FO95754 770 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 WNT1P04628 370 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 EPHX1P07099 455 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 C1SP09871 688 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 ZDHHC11BP0C7U3 371 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 PTPN1P18031 435 aaKnown RBP15.25■□□□□ 0.03
VPS29-209ENST00000551655 ABCB4P21439 1286 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 SCP2P22307 547 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 CD27P26842 260 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 SLC5A3P53794 718 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 PCBP4P57723 403 aaKnown RBP15.25■□□□□ 0.03
VPS29-209ENST00000551655 NFKB2Q00653 900 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 INSM1Q01101 510 aaPredicted RBP15.25■□□□□ 0.03
VPS29-209ENST00000551655 NFATC3Q12968 1075 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 BROXQ5VW32 411 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 SNX30Q5VWJ9 437 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 CENPQQ7L2Z9 268 aaPredicted RBP15.25■□□□□ 0.03
VPS29-209ENST00000551655 DPH6Q7L8W6 267 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 ZNF366Q8N895 744 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 FBXO18Q8NFZ0 1043 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 OR6B3Q8NGW1 331 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 SAP25Q8TEE9 199 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 OVCA2Q8WZ82 227 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 HIC2Q96JB3 615 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 ELF4Q99607 663 aaPredicted RBP15.25■□□□□ 0.03
VPS29-209ENST00000551655 ELOVL4Q9GZR5 314 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 PCED1AQ9H1Q7 454 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 LHX5Q9H2C1 402 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.25■□□□□ 0.03
VPS29-209ENST00000551655 FBXO10Q9UK96 956 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 CLEC4EQ9ULY5 219 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 CLCA2Q9UQC9 943 aa15.25■□□□□ 0.03
VPS29-209ENST00000551655 RTN3O95197 1032 aaPredicted RBP15.24■□□□□ 0.03
VPS29-209ENST00000551655 MPOP05164 745 aa15.24■□□□□ 0.03
VPS29-209ENST00000551655 GNL1P36915 607 aaPredicted RBP15.24■□□□□ 0.03
VPS29-209ENST00000551655 TUBP50607 506 aa15.24■□□□□ 0.03
VPS29-209ENST00000551655 C21orf59P57076 290 aa15.24■□□□□ 0.03
VPS29-209ENST00000551655 SFR1Q86XK3 245 aa15.24■□□□□ 0.03
VPS29-209ENST00000551655 SNX25Q9H3E2 840 aa15.24■□□□□ 0.03
VPS29-209ENST00000551655 PCIF1Q9H4Z3 704 aa15.24■□□□□ 0.03
VPS29-209ENST00000551655 NUDT5Q9UKK9 219 aa15.24■□□□□ 0.03
VPS29-209ENST00000551655 IGHV4-34P06331 123 aa15.23■□□□□ 0.03
VPS29-209ENST00000551655 CDK4P11802 303 aa15.23■□□□□ 0.03
VPS29-209ENST00000551655 UCNP55089 124 aa15.23■□□□□ 0.03
VPS29-209ENST00000551655 VAC14Q08AM6 782 aa15.23■□□□□ 0.03
VPS29-209ENST00000551655 BNIP3Q12983 259 aa15.23■□□□□ 0.03
VPS29-209ENST00000551655 C6orf132Q5T0Z8 1188 aa15.23■□□□□ 0.03
VPS29-209ENST00000551655 CCDC83Q8IWF9 413 aa15.23■□□□□ 0.03
VPS29-209ENST00000551655 DHX40Q8IX18 779 aaKnown RBP15.23■□□□□ 0.03
VPS29-209ENST00000551655 DCBLD1Q8N8Z6 715 aa15.23■□□□□ 0.03
VPS29-209ENST00000551655 RBBP8NLQ8NC74 664 aaPredicted RBP15.23■□□□□ 0.03
VPS29-209ENST00000551655 OR2T3Q8NH03 318 aa15.23■□□□□ 0.03
VPS29-209ENST00000551655 KCNE4Q8WWG9 221 aa15.23■□□□□ 0.03
VPS29-209ENST00000551655 CBWD1Q9BRT8 395 aa15.23■□□□□ 0.03
VPS29-209ENST00000551655 ACE2Q9BYF1 805 aaPredicted RBP15.23■□□□□ 0.03
VPS29-209ENST00000551655 CIPCQ9C0C6 399 aa15.23■□□□□ 0.03
VPS29-209ENST00000551655 EBF2Q9HAK2 575 aa15.23■□□□□ 0.03
VPS29-209ENST00000551655 OSER1Q9NX31 292 aa15.23■□□□□ 0.03
VPS29-209ENST00000551655 TBC1D7Q9P0N9 293 aa15.23■□□□□ 0.03
VPS29-209ENST00000551655 LSM7Q9UK45 103 aaKnown RBP15.23■□□□□ 0.03
VPS29-209ENST00000551655 SLC27A6Q9Y2P4 619 aa15.23■□□□□ 0.03
VPS29-209ENST00000551655 UTP20O75691 2785 aaKnown RBP15.22■□□□□ 0.03
VPS29-209ENST00000551655 WNT9AO14904 365 aa15.22■□□□□ 0.03
VPS29-209ENST00000551655 VILLO15195 856 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms