RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 USP34Q70CQ2 3546 aa16.11■□□□□ 0.17
PRPF40B-211ENST00000551063 SOX5P35711 763 aa16.11■□□□□ 0.17
PRPF40B-211ENST00000551063 SNX16P57768 344 aa16.11■□□□□ 0.17
PRPF40B-211ENST00000551063 TPM4P67936 248 aa16.11■□□□□ 0.17
PRPF40B-211ENST00000551063 GAS6Q14393 721 aa16.11■□□□□ 0.17
PRPF40B-211ENST00000551063 TRIP4Q15650 581 aaPredicted RBP16.11■□□□□ 0.17
PRPF40B-211ENST00000551063 NAIF1Q69YI7 327 aaPredicted RBP16.11■□□□□ 0.17
PRPF40B-211ENST00000551063 Q6ZS52 159 aa16.11■□□□□ 0.17
PRPF40B-211ENST00000551063 ZNF677Q86XU0 584 aa16.11■□□□□ 0.17
PRPF40B-211ENST00000551063 FMNL3Q8IVF7 1028 aa16.11■□□□□ 0.17
PRPF40B-211ENST00000551063 MAML2Q8IZL2 1156 aaPredicted RBP16.11■□□□□ 0.17
PRPF40B-211ENST00000551063 FAM149B1Q96BN6 582 aa16.11■□□□□ 0.17
PRPF40B-211ENST00000551063 PPP1R13BQ96KQ4 1090 aa16.11■□□□□ 0.17
PRPF40B-211ENST00000551063 PDCL3Q9H2J4 239 aa16.11■□□□□ 0.17
PRPF40B-211ENST00000551063 CBX8Q9HC52 389 aa16.11■□□□□ 0.17
PRPF40B-211ENST00000551063 FBRSL1Q9HCM7 1045 aaKnown RBP16.11■□□□□ 0.17
PRPF40B-211ENST00000551063 RTN4Q9NQC3 1192 aaKnown RBP16.11■□□□□ 0.17
PRPF40B-211ENST00000551063 ASNSD1Q9NWL6 643 aa16.11■□□□□ 0.17
PRPF40B-211ENST00000551063 PAPSS2O95340 614 aaPredicted RBP16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 LSM8O95777 96 aaKnown RBP16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 LATS1O95835 1130 aa16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 EGFP01133 1207 aa16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 LMNAP02545 664 aaKnown RBP16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 KLKB1P03952 638 aa16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 GLI1P08151 1106 aa16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 SP9P0CG40 484 aa16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 CORO1AP31146 461 aaKnown RBP16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 CHKAP35790 457 aa16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 STAT1P42224 750 aa16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 NNTQ13423 1086 aa16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 PPP2R5DQ14738 602 aa16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 FILIP1LQ4L180 1135 aa16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 SCUBE3Q8IX30 993 aa16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 ETFBKMTQ8IXQ9 262 aa16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 TMEM35BQ8NCS4 154 aa16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 DDX1Q92499 740 aaKnown RBP16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 SERPINB11Q96P15 392 aa16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 CPXM1Q96SM3 734 aa16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 NLRC4Q9NPP4 1024 aa16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 WDR35Q9P2L0 1181 aa16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 SFMBT1Q9UHJ3 866 aa16.1■□□□□ 0.17
PRPF40B-211ENST00000551063 RIF1Q5UIP0 2472 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 A0A1B0GTH6 734 aa16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 CHURC1-FNTBB4DL54 471 aa16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 GFPT2O94808 682 aa16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 FYNP06241 537 aa16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 HMBSP08397 361 aa16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 NCAM1P13591 858 aa16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 HARS2P49590 506 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 ZNF445P59923 1031 aa16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 RING1Q06587 406 aa16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 ANO4Q32M45 955 aa16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 PREPLQ4J6C6 727 aaPredicted RBP16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 PTPN20Q4JDL3 420 aa16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 TOGARAM2Q6ZUX3 1019 aa16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 NOP9Q86U38 636 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 C12orf40Q86WS4 652 aa16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 TMEM25Q86YD3 366 aa16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 ZDHHC17Q8IUH5 632 aa16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 FAM217AQ8IXS0 508 aa16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 CPXM2Q8N436 756 aa16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 DQX1Q8TE96 717 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 EZH1Q92800 747 aaPredicted RBP16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 PNKPQ96T60 521 aa16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 SYNCQ9H7C4 482 aa16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 POPDC2Q9HBU9 364 aa16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 TJP2Q9UDY2 1190 aa16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 STOML2Q9UJZ1 356 aa16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 NOCTQ9UK39 431 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 AGO1Q9UL18 857 aaKnown RBP16.09■□□□□ 0.17
PRPF40B-211ENST00000551063 A0A1W2PQC6 194 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 CAPN9O14815 690 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 MSI1O43347 362 aaKnown RBP16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 CACNG3O60359 315 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 HSF2BPO75031 334 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 ATG13O75143 517 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 RNF40O75150 1001 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 IGLV3-27P01718 113 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 APODP05090 189 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 GRIA2P42262 883 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 CXCL12P48061 93 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 YWHAZP63104 245 aaKnown RBP16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 FOXK2Q01167 660 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 TAF3Q5VWG9 929 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 NUGGCQ68CJ6 796 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 OLFML1Q6UWY5 402 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 LUZP1Q86V48 1076 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 DENND1CQ8IV53 801 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 MSANTD4Q8NCY6 345 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 ACDQ96AP0 544 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 PIWIL1Q96J94 861 aaKnown RBP16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 XPO6Q96QU8 1125 aaKnown RBP16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 BBS2Q9BXC9 721 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 FAM126AQ9BYI3 521 aaPredicted RBP16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 ARHGEF4Q9NR80 690 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 DEC1Q9P2X7 70 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 R4GN57 208 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 FAM186AA6NE01 2351 aa16.08■□□□□ 0.16
PRPF40B-211ENST00000551063 CACNA1IQ9P0X4 2223 aa16.07■□□□□ 0.16
PRPF40B-211ENST00000551063 NEDD8-MDP1E9PL57 170 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms