RNA–Protein interactions for RNA: ENST00000550457.1

CCNT1-203, Transcript of cyclin T1, humanhuman

TSL 3

Gene CCNT1, Length 351 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-203ENST00000550457 RHOXF2BP0C7M4 288 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 GHRP10912 638 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 OSMP13725 252 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 PDIA3P30101 505 aaKnown RBP3.58□□□□□ -1.84
CCNT1-203ENST00000550457 NAP1L1P55209 391 aaKnown RBP3.58□□□□□ -1.84
CCNT1-203ENST00000550457 CEBPZQ03701 1054 aaKnown RBP3.58□□□□□ -1.84
CCNT1-203ENST00000550457 GRIK3Q13003 919 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 TRAF1Q13077 416 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 MAPK7Q13164 816 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 STK3Q13188 491 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 RIPK1Q13546 671 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 IDI1Q13907 227 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 MORC3Q14149 939 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 PDCD2Q16342 344 aaPredicted RBP3.58□□□□□ -1.84
CCNT1-203ENST00000550457 TXNRD1Q16881 649 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 IMMTQ16891 758 aaKnown RBP3.58□□□□□ -1.84
CCNT1-203ENST00000550457 CD300EQ496F6 205 aaPredicted RBP3.58□□□□□ -1.84
CCNT1-203ENST00000550457 LACTB2Q53H82 288 aaPredicted RBP3.58□□□□□ -1.84
CCNT1-203ENST00000550457 AP1ARQ63HQ0 302 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 KDM7AQ6ZMT4 941 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 CCDC121Q6ZUS5 278 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 CCDC170Q8IYT3 715 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 FAM177A1Q8N128 213 aaPredicted RBP3.58□□□□□ -1.84
CCNT1-203ENST00000550457 MREGQ8N565 214 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 SPATA20Q8TB22 786 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 AENQ8WTP8 325 aaKnown RBP3.58□□□□□ -1.84
CCNT1-203ENST00000550457 WASF1Q92558 559 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 DPF2Q92785 391 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 N4BP2L2Q92802 583 aaPredicted RBP3.58□□□□□ -1.84
CCNT1-203ENST00000550457 ZKSCAN4Q969J2 545 aaPredicted RBP3.58□□□□□ -1.84
CCNT1-203ENST00000550457 ZBTB9Q96C00 473 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 CYFIP2Q96F07 1278 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 FAXDC2Q96IV6 333 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 FAM227BQ96M60 508 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 RHOXF2Q9BQY4 288 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 SELENOOQ9BVL4 669 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 MRPL44Q9H9J2 332 aaKnown RBP3.58□□□□□ -1.84
CCNT1-203ENST00000550457 CCM2LQ9NUG4 571 aaPredicted RBP3.58□□□□□ -1.84
CCNT1-203ENST00000550457 INTS13Q9NVM9 706 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 C14orf119Q9NWQ9 140 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 DNAJC28Q9NX36 388 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 C9orf78Q9NZ63 289 aaPredicted RBP3.58□□□□□ -1.84
CCNT1-203ENST00000550457 CTTNBP2NLQ9P2B4 639 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 ADD3Q9UEY8 706 aaKnown RBP3.58□□□□□ -1.84
CCNT1-203ENST00000550457 ST3GAL5Q9UNP4 418 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 NFE2L3Q9Y4A8 694 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 CAPN7Q9Y6W3 813 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 UBN2Q6ZU65 1347 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 IGSF1Q8N6C5 1336 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 FLT4P35916 1363 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 COL15A1P39059 1388 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 PLEKHG1Q9ULL1 1385 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 XRN1Q8IZH2 1706 aaKnown RBP3.58□□□□□ -1.84
CCNT1-203ENST00000550457 TSPOAP1O95153 1857 aa3.58□□□□□ -1.84
CCNT1-203ENST00000550457 PRAMEF33A0A0G2JMD5 474 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 GOLGA6L10A0A0M3HER8 536 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 CFAP73A6NFT4 308 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 GOLGA6L10A6NI86 522 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 TTC36A6NLP5 189 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 AGPSO00116 658 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 CPLX1O14810 134 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 TECPR2O15040 1411 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 GRIN2DO15399 1336 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 PRAMEF10O60809 474 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 NEBLO76041 1014 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 PRKCGP05129 697 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 CHRM2P08172 466 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 GSTA1P08263 222 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 CYP21A2P08686 494 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 SBK3P0C264 359 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 KCNA2P16389 499 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 MRC1P22897 1456 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 HOXA7P31268 230 aaPredicted RBP3.57□□□□□ -1.84
CCNT1-203ENST00000550457 CLNS1AP54105 237 aaKnown RBP3.57□□□□□ -1.84
CCNT1-203ENST00000550457 ADKP55263 362 aaKnown RBP3.57□□□□□ -1.84
CCNT1-203ENST00000550457 GNGT1P63211 74 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 SSBP2P81877 361 aaPredicted RBP3.57□□□□□ -1.84
CCNT1-203ENST00000550457 MC2RQ01718 297 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 AKAP17AQ02040 695 aaKnown RBP3.57□□□□□ -1.84
CCNT1-203ENST00000550457 KIF23Q02241 960 aaPredicted RBP3.57□□□□□ -1.84
CCNT1-203ENST00000550457 TFF2Q03403 129 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 XRCC4Q13426 336 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 BIRC3Q13489 604 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 TRIM29Q14134 588 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 KARSQ15046 597 aaKnown RBP3.57□□□□□ -1.84
CCNT1-203ENST00000550457 POSTNQ15063 836 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 PPP2R5AQ15172 486 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 PTPRRQ15256 657 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 SAFBQ15424 915 aaKnown RBP eCLIP3.57□□□□□ -1.84
CCNT1-203ENST00000550457 SRSF7Q16629 238 aaKnown RBP eCLIP3.57□□□□□ -1.84
CCNT1-203ENST00000550457 MTHFSDQ2M296 383 aaKnown RBP3.57□□□□□ -1.84
CCNT1-203ENST00000550457 PLEKHO1Q53GL0 409 aaPredicted RBP3.57□□□□□ -1.84
CCNT1-203ENST00000550457 FCRLBQ6BAA4 426 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 C6orf89Q6UWU4 347 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 LRIG3Q6UXM1 1119 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 KSR2Q6VAB6 950 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 RAD9BQ6WBX8 426 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 NBPF5PQ86XG9 351 aaPredicted RBP3.57□□□□□ -1.84
CCNT1-203ENST00000550457 IFT20Q8IY31 132 aa3.57□□□□□ -1.84
CCNT1-203ENST00000550457 SLC35F6Q8N357 371 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms