RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, human

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB5C-206	ENST00000550406	CDK5RAP1	Q96SZ6	601 aa	Known RBP	13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	NPY6R	Q99463	290 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	EIF3C	Q99613	913 aa	Known RBP	13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	TRIM7	Q9C029	511 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	SMOC2	Q9H3U7	446 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	OLA1	Q9NTK5	396 aa	Known RBP	13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	MYO1A	Q9UBC5	1043 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	TFR2	Q9UP52	801 aa		13.62	□□□□□ -0.23
RAB5C-206	ENST00000550406	SLC12A8	A0AV02	714 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	TMEM191C	A6NGB0	347 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	GOLGA6L6	A8MZA4	724 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	CAPN9	O14815	690 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	STC2	O76061	302 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	NDUFA10	O95299	355 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	TRUB2	O95900	331 aa	Known RBP	13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	IGLV3-27	P01718	113 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	KLKB1	P03952	638 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	H2AFZ	P0C0S5	128 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	MYBL1	P10243	752 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	KRT3	P12035	628 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	MAGEA1	P43355	309 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	GPC5	P78333	572 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	CCZ1B	P86790	482 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	CCZ1	P86791	482 aa	Predicted RBP	13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	CCDC14	Q49A88	953 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	SH3PXD2A	Q5TCZ1	1133 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	DNAJC24	Q6P3W2	148 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	H2AFV	Q71UI9	128 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	MTSS1L	Q765P7	747 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	TADA2B	Q86TJ2	420 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	MIB1	Q86YT6	1006 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	MFSD6L	Q8IWD5	586 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	CELF5	Q8N6W0	485 aa	Known RBP	13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	SLC39A13	Q96H72	371 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	TBCB	Q99426	244 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	SELENOO	Q9BVL4	669 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	OBP2A	Q9NY56	170 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	CFAP97	Q9P2B7	532 aa		13.61	□□□□□ -0.23
RAB5C-206	ENST00000550406	RCCD1	A6NED2	376 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	SCAMP3	O14828	347 aa	Known RBP	13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	IRAK2	O43187	625 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	ENDOD1	O94919	500 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	HMBS	P08397	361 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	TMEM253	P0C7T8	217 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	IRF1	P10914	325 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	PDGFRA	P16234	1089 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	CYLC1	P35663	651 aa	Predicted RBP	13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	ATXN1	P54253	815 aa	Known RBP	13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	ZNF252P-AS1	Q0IIN9	211 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	GRM2	Q14416	872 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	TRIP4	Q15650	581 aa	Predicted RBP	13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	C15orf59	Q2T9L4	293 aa	Predicted RBP	13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	SLC44A3	Q8N4M1	653 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	ACRBP	Q8NEB7	543 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	BPIFB1	Q8TDL5	484 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	CENPI	Q92674	756 aa	Predicted RBP	13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	TRIM11	Q96F44	468 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	ASIC4	Q96FT7	647 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	FCRL2	Q96LA5	508 aa	Predicted RBP	13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	CFAP57	Q96MR6	1250 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	MCEE	Q96PE7	176 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	TRIM62	Q9BVG3	475 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	NACA2	Q9H009	215 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	LINC00597	Q9H2U6	94 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	KIF9	Q9HAQ2	790 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	PARVA	Q9NVD7	372 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	IGSF9	Q9P2J2	1179 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	HBS1L	Q9Y450	684 aa	Known RBP	13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	PCDHA13	Q9Y5I0	950 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	UNC80	Q8N2C7	3258 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406	MIA3	Q5JRA6	1907 aa		13.6	□□□□□ -0.23
RAB5C-206	ENST00000550406		A0A0U1RQJ8	604 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406		I6L893	689 aa	Predicted RBP	13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406		M0QYT0	321 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	DPYSL4	O14531	572 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	GPD1	P21695	349 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	PTPN9	P43378	593 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	SULT1E1	P49888	294 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	COG7	P83436	770 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	FCHO2	Q0JRZ9	810 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	SLC25A52	Q3SY17	297 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	C10orf76	Q5T2E6	689 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406		Q6ZNB5	142 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	HTR3D	Q70Z44	454 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	RNF135	Q8IUD6	432 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	ARFGAP1	Q8N6T3	406 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	ATRIP	Q8WXE1	791 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	NXPE3	Q969Y0	559 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	E2F7	Q96AV8	911 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	PGAP3	Q96FM1	320 aa	Predicted RBP	13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	ZFYVE19	Q96K21	471 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	BTBD6	Q96KE9	485 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	PPP1R9B	Q96SB3	815 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	FAM83C	Q9BQN1	747 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	NUP85	Q9BW27	656 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	KCNF1	Q9H3M0	494 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	ANLN	Q9NQW6	1124 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	PIGV	Q9NUD9	493 aa		13.59	□□□□□ -0.23
RAB5C-206	ENST00000550406	INTU	Q9ULD6	942 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms