RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 IFNAR2P48551 515 aa21.74■■□□□ 1.07
PRDM4-205ENST00000550376 OVOS1Q6IE37 1185 aa21.74■■□□□ 1.07
PRDM4-205ENST00000550376 KCNT2Q6UVM3 1135 aa21.74■■□□□ 1.07
PRDM4-205ENST00000550376 STRADAQ7RTN6 431 aa21.74■■□□□ 1.07
PRDM4-205ENST00000550376 FAF2Q96CS3 445 aa21.74■■□□□ 1.07
PRDM4-205ENST00000550376 ROPN1BQ9BZX4 212 aaPredicted RBP21.74■■□□□ 1.07
PRDM4-205ENST00000550376 ROPN1Q9HAT0 212 aaPredicted RBP21.74■■□□□ 1.07
PRDM4-205ENST00000550376 GCAP28676 217 aa21.74■■□□□ 1.07
PRDM4-205ENST00000550376 PCSK1P29120 753 aa21.74■■□□□ 1.07
PRDM4-205ENST00000550376 STIP1P31948 543 aaKnown RBP21.74■■□□□ 1.07
PRDM4-205ENST00000550376 MMP13P45452 471 aa21.74■■□□□ 1.07
PRDM4-205ENST00000550376 PGFP49763 221 aa21.74■■□□□ 1.07
PRDM4-205ENST00000550376 GATMP50440 423 aa21.74■■□□□ 1.07
PRDM4-205ENST00000550376 NCBP2-AS2Q69YL0 99 aa21.74■■□□□ 1.07
PRDM4-205ENST00000550376 B3GALT6Q96L58 329 aa21.74■■□□□ 1.07
PRDM4-205ENST00000550376 UBN1Q9NPG3 1134 aa21.74■■□□□ 1.07
PRDM4-205ENST00000550376 DTLQ9NZJ0 730 aa21.74■■□□□ 1.07
PRDM4-205ENST00000550376 PCDH10Q9P2E7 1040 aa21.74■■□□□ 1.07
PRDM4-205ENST00000550376 EXOC1LA0A1B0GW35 172 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 C9IYK1 514 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 CABYRO75952 493 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 OR1G1P47890 313 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 TMED2Q15363 201 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 TNFAIP8L3Q5GJ75 292 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 ARCQ7LC44 396 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 METTL23Q86XA0 190 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 FBXO36Q8NEA4 188 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 SERPINB12Q96P63 405 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 CCT8L2Q96SF2 557 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 KCNK9Q9NPC2 374 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 CLUHO75153 1309 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 TGM2P21980 687 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 SCNN1AP37088 669 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 INTS6LQ5JSJ4 861 aaKnown RBP21.73■■□□□ 1.07
PRDM4-205ENST00000550376 SDHAF4Q5VUM1 108 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 MFSD5Q6N075 450 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 NLRP14Q86W24 1093 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 RELL1Q8IUW5 271 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 SRRM1Q8IYB3 904 aaKnown RBP21.73■■□□□ 1.07
PRDM4-205ENST00000550376 PYROXD1Q8WU10 500 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 NT5C3BQ969T7 300 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 SMARCD1Q96GM5 515 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 RGS18Q9NS28 235 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 NUDT5Q9UKK9 219 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 CHMP2BQ9UQN3 213 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 PTCH2Q9Y6C5 1203 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 CASP8AP2Q9UKL3 1982 aa21.73■■□□□ 1.07
PRDM4-205ENST00000550376 MPP2Q14168 576 aa21.72■■□□□ 1.07
PRDM4-205ENST00000550376 ANKRD42Q8N9B4 389 aa21.72■■□□□ 1.07
PRDM4-205ENST00000550376 SLC2A13Q96QE2 648 aa21.72■■□□□ 1.07
PRDM4-205ENST00000550376 ARHGEF4Q9NR80 690 aa21.72■■□□□ 1.07
PRDM4-205ENST00000550376 DDIT4Q9NX09 232 aa21.72■■□□□ 1.07
PRDM4-205ENST00000550376 USP3Q9Y6I4 520 aa21.72■■□□□ 1.07
PRDM4-205ENST00000550376 METTL18O95568 372 aa21.72■■□□□ 1.07
PRDM4-205ENST00000550376 APRTP07741 180 aa21.72■■□□□ 1.07
PRDM4-205ENST00000550376 RDXP35241 583 aaKnown RBP21.72■■□□□ 1.07
PRDM4-205ENST00000550376 ARL4CP56559 192 aa21.72■■□□□ 1.07
PRDM4-205ENST00000550376 RNASELQ05823 741 aaKnown RBP21.72■■□□□ 1.07
PRDM4-205ENST00000550376 GLB1LQ6UWU2 654 aa21.72■■□□□ 1.07
PRDM4-205ENST00000550376 C3orf62Q6ZUJ4 267 aa21.72■■□□□ 1.07
PRDM4-205ENST00000550376 SLC24A5Q71RS6 500 aa21.72■■□□□ 1.07
PRDM4-205ENST00000550376 BHLHA9Q7RTU4 235 aa21.72■■□□□ 1.07
PRDM4-205ENST00000550376 PCGF5Q86SE9 256 aa21.72■■□□□ 1.07
PRDM4-205ENST00000550376 AGGF1Q8N302 714 aaeCLIP21.72■■□□□ 1.07
PRDM4-205ENST00000550376 ACBD6Q9BR61 282 aa21.72■■□□□ 1.07
PRDM4-205ENST00000550376 TRIM56Q9BRZ2 755 aaKnown RBP21.72■■□□□ 1.07
PRDM4-205ENST00000550376 KIF9Q9HAQ2 790 aa21.72■■□□□ 1.07
PRDM4-205ENST00000550376 MOXD2PA6NHM9 499 aa21.71■■□□□ 1.07
PRDM4-205ENST00000550376 MFSD11O43934 449 aa21.71■■□□□ 1.07
PRDM4-205ENST00000550376 GRK4P32298 578 aa21.71■■□□□ 1.07
PRDM4-205ENST00000550376 ARL4AP40617 200 aa21.71■■□□□ 1.07
PRDM4-205ENST00000550376 QPCTQ16769 361 aa21.71■■□□□ 1.07
PRDM4-205ENST00000550376 RAB41Q5JT25 222 aa21.71■■□□□ 1.07
PRDM4-205ENST00000550376 FAM171BQ6P995 826 aa21.71■■□□□ 1.07
PRDM4-205ENST00000550376 PXYLP1Q8TE99 480 aa21.71■■□□□ 1.07
PRDM4-205ENST00000550376 RNF139Q8WU17 664 aa21.71■■□□□ 1.07
PRDM4-205ENST00000550376 PRMT1Q99873 361 aaKnown RBP21.71■■□□□ 1.07
PRDM4-205ENST00000550376 ETNK1Q9HBU6 452 aa21.71■■□□□ 1.07
PRDM4-205ENST00000550376 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.71■■□□□ 1.07
PRDM4-205ENST00000550376 STAP1Q9ULZ2 295 aa21.71■■□□□ 1.07
PRDM4-205ENST00000550376 ZNF638Q14966 1978 aaKnown RBP21.71■■□□□ 1.07
PRDM4-205ENST00000550376 A0A087WUV0 522 aaPredicted RBP21.71■■□□□ 1.07
PRDM4-205ENST00000550376 LTFP02788 710 aa21.71■■□□□ 1.07
PRDM4-205ENST00000550376 RPLP2P05387 115 aaKnown RBP21.71■■□□□ 1.07
PRDM4-205ENST00000550376 TDRD15B5MCY1 1934 aaKnown RBP21.7■■□□□ 1.07
PRDM4-205ENST00000550376 M0QZQ0 153 aa21.7■■□□□ 1.06
PRDM4-205ENST00000550376 FAM163BP0C2L3 166 aa21.7■■□□□ 1.06
PRDM4-205ENST00000550376 PBX3P40426 434 aa21.7■■□□□ 1.06
PRDM4-205ENST00000550376 ELK3P41970 407 aa21.7■■□□□ 1.06
PRDM4-205ENST00000550376 DCLRE1AQ6PJP8 1040 aa21.7■■□□□ 1.06
PRDM4-205ENST00000550376 WDR6Q9NNW5 1121 aaKnown RBP21.7■■□□□ 1.06
PRDM4-205ENST00000550376 PIH1D1Q9NWS0 290 aaKnown RBP21.7■■□□□ 1.06
PRDM4-205ENST00000550376 TMEM120BA0PK00 339 aa21.7■■□□□ 1.06
PRDM4-205ENST00000550376 TRAPPC3O43617 180 aa21.7■■□□□ 1.06
PRDM4-205ENST00000550376 NBNO60934 754 aa21.7■■□□□ 1.06
PRDM4-205ENST00000550376 IVLP07476 585 aa21.7■■□□□ 1.06
PRDM4-205ENST00000550376 GRIA1P42261 906 aa21.7■■□□□ 1.06
PRDM4-205ENST00000550376 GPNMBQ14956 572 aa21.7■■□□□ 1.06
PRDM4-205ENST00000550376 VSTM1Q6UX27 236 aa21.7■■□□□ 1.06
PRDM4-205ENST00000550376 CEP57Q86XR8 500 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms