RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 ZNF516Q92618 1163 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 TMEM79Q9BSE2 394 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 NRDE2Q9H7Z3 1164 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 TBC1D23Q9NUY8 699 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 ADA2Q9NZK5 511 aa12.51□□□□□ -0.41
VDR-208ENST00000550325 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.5□□□□□ -0.41
VDR-208ENST00000550325 COL22A1Q8NFW1 1626 aaPredicted RBP12.5□□□□□ -0.41
VDR-208ENST00000550325 DDTLA6NHG4 134 aaPredicted RBP12.5□□□□□ -0.41
VDR-208ENST00000550325 H3BNX3 289 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 KLF11O14901 512 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 F7P08709 466 aaPredicted RBP12.5□□□□□ -0.41
VDR-208ENST00000550325 OCM2P0CE71 109 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 OCMP0CE72 109 aaPredicted RBP12.5□□□□□ -0.41
VDR-208ENST00000550325 RFC1P35251 1148 aaPredicted RBP12.5□□□□□ -0.41
VDR-208ENST00000550325 IDH3AP50213 366 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 CRADDP78560 199 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 GTF2BQ00403 316 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 ART3Q13508 389 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 TEX44Q53QW1 395 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 GPAT2Q6NUI2 795 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 DRICH1Q6PGQ1 229 aaPredicted RBP12.5□□□□□ -0.41
VDR-208ENST00000550325 POTEHQ6S545 545 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 ZNF677Q86XU0 584 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 SERPINI1Q99574 410 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 PKP2Q99959 881 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 KCNH7Q9NS40 1196 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 TBC1D22BQ9NU19 505 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 POLLQ9UGP5 575 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 MAST2Q6P0Q8 1798 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 XRCC1P18887 633 aaPredicted RBP12.5□□□□□ -0.41
VDR-208ENST00000550325 ETFBP38117 255 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 OGFRL1Q5TC84 451 aaPredicted RBP12.5□□□□□ -0.41
VDR-208ENST00000550325 C10orf107Q8IVU9 208 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 CPNE9Q8IYJ1 553 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 ATP2A3Q93084 1043 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 MOCOSQ96EN8 888 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 SIRPGQ9P1W8 387 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 TXNDC16Q9P2K2 825 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 NHSL1Q5SYE7 1610 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 RFPL1O75677 317 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 THRAP10827 490 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 CD1EP15812 388 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 SAT1P21673 171 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 RXRGP48443 463 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 ESRRGP62508 458 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 PDAP1Q13442 181 aaKnown RBP12.5□□□□□ -0.41
VDR-208ENST00000550325 SEPT6Q14141 434 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 UGCGQ16739 394 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 POTEAQ6S8J7 498 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 OLFML1Q6UWY5 402 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 GFM2Q969S9 779 aaKnown RBP12.5□□□□□ -0.41
VDR-208ENST00000550325 CEP170P1Q96L14 293 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 LENG8Q96PV6 779 aaPredicted RBP12.5□□□□□ -0.41
VDR-208ENST00000550325 STRA6Q9BX79 667 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 EPB41L1Q9H4G0 881 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 PLGRKTQ9HBL7 147 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 SMYD2Q9NRG4 433 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 INIPQ9NRY2 104 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 SSX2IPQ9Y2D8 614 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 CEPT1Q9Y6K0 416 aa12.5□□□□□ -0.41
VDR-208ENST00000550325 AMHP03971 560 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 KRT3P12035 628 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 IL1R2P27930 398 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 THOP1P52888 689 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 CDH6P55285 790 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 MFSD4BQ5TF39 518 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 TDRD10Q5VZ19 366 aaKnown RBP12.49□□□□□ -0.41
VDR-208ENST00000550325 TRIM72Q6ZMU5 477 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 C20orf96Q9NUD7 363 aaPredicted RBP12.49□□□□□ -0.41
VDR-208ENST00000550325 TRNAU1APQ9NX07 287 aaKnown RBP12.49□□□□□ -0.41
VDR-208ENST00000550325 TJP2Q9UDY2 1190 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 FETUBQ9UGM5 382 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 ITGA11Q9UKX5 1188 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 CALB1P05937 261 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 ATP2B4P23634 1241 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 C1QBPQ07021 282 aaKnown RBP12.49□□□□□ -0.41
VDR-208ENST00000550325 PIGHQ14442 188 aaPredicted RBP12.49□□□□□ -0.41
VDR-208ENST00000550325 PPP2R5DQ14738 602 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 FSCBQ5H9T9 825 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 ANGEL2Q5VTE6 544 aaKnown RBP12.49□□□□□ -0.41
VDR-208ENST00000550325 FAM91A1Q658Y4 838 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 KBTBD6Q86V97 674 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 HACE1Q8IYU2 909 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 TNS4Q8IZW8 715 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 AHI1Q8N157 1196 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 ZNF778Q96MU6 729 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 TCHPQ9BT92 498 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 C6orf203Q9P0P8 240 aaPredicted RBP12.49□□□□□ -0.41
VDR-208ENST00000550325 COQ4Q9Y3A0 265 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 FIS1Q9Y3D6 152 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 ZBED1O96006 694 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 EIF2AK2P19525 551 aaKnown RBP12.49□□□□□ -0.41
VDR-208ENST00000550325 EIF2B2P49770 351 aaKnown RBP12.49□□□□□ -0.41
VDR-208ENST00000550325 PSMC1P62191 440 aaKnown RBP12.49□□□□□ -0.41
VDR-208ENST00000550325 YWHAZP63104 245 aaKnown RBP12.49□□□□□ -0.41
VDR-208ENST00000550325 OGFOD2Q6N063 350 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 JOSD2Q8TAC2 188 aa12.49□□□□□ -0.41
VDR-208ENST00000550325 WDR55Q9H6Y2 383 aaPredicted RBP12.49□□□□□ -0.41
VDR-208ENST00000550325 APOBEC3GQ9HC16 384 aaKnown RBP12.49□□□□□ -0.41
VDR-208ENST00000550325 FAIMQ9NVQ4 179 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms