RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 NAGPAQ9UK23 515 aa16.22■□□□□ 0.19
RAB5C-205ENST00000550013 MSRB2Q9Y3D2 182 aa16.22■□□□□ 0.19
RAB5C-205ENST00000550013 FREM2Q5SZK8 3169 aa16.22■□□□□ 0.19
RAB5C-205ENST00000550013 A0A1W2PQD8 194 aa16.21■□□□□ 0.19
RAB5C-205ENST00000550013 NDUFS2O75306 463 aa16.21■□□□□ 0.19
RAB5C-205ENST00000550013 KIF20AO95235 890 aa16.21■□□□□ 0.19
RAB5C-205ENST00000550013 KLKB1P03952 638 aa16.21■□□□□ 0.19
RAB5C-205ENST00000550013 SYPP08247 313 aa16.21■□□□□ 0.19
RAB5C-205ENST00000550013 PDIA4P13667 645 aaKnown RBP16.21■□□□□ 0.19
RAB5C-205ENST00000550013 MAOBP27338 520 aa16.21■□□□□ 0.19
RAB5C-205ENST00000550013 VAMP7P51809 220 aa16.21■□□□□ 0.19
RAB5C-205ENST00000550013 KIF11P52732 1056 aa16.21■□□□□ 0.19
RAB5C-205ENST00000550013 DNM1Q05193 864 aaKnown RBP16.21■□□□□ 0.19
RAB5C-205ENST00000550013 PKP1Q13835 747 aa16.21■□□□□ 0.19
RAB5C-205ENST00000550013 PLEKHG6Q3KR16 790 aa16.21■□□□□ 0.19
RAB5C-205ENST00000550013 CHCHD4Q8N4Q1 142 aa16.21■□□□□ 0.19
RAB5C-205ENST00000550013 TAS1R2Q8TE23 839 aa16.21■□□□□ 0.19
RAB5C-205ENST00000550013 ZNF419Q96HQ0 510 aaPredicted RBP16.21■□□□□ 0.19
RAB5C-205ENST00000550013 NT5C1AQ9BXI3 368 aa16.21■□□□□ 0.19
RAB5C-205ENST00000550013 PNPLA8Q9NP80 782 aa16.21■□□□□ 0.19
RAB5C-205ENST00000550013 DNAAF2Q9NVR5 837 aaKnown RBP16.21■□□□□ 0.19
RAB5C-205ENST00000550013 FBXO10Q9UK96 956 aa16.21■□□□□ 0.19
RAB5C-205ENST00000550013 FRMD4BQ9Y2L6 1034 aa16.21■□□□□ 0.19
RAB5C-205ENST00000550013 STON1Q9Y6Q2 735 aa16.21■□□□□ 0.19
RAB5C-205ENST00000550013 CKAP5Q14008 2032 aa16.2■□□□□ 0.18
RAB5C-205ENST00000550013 GFRA2O00451 464 aa16.2■□□□□ 0.18
RAB5C-205ENST00000550013 SH3BP5O60239 455 aa16.2■□□□□ 0.18
RAB5C-205ENST00000550013 CILPO75339 1184 aa16.2■□□□□ 0.18
RAB5C-205ENST00000550013 GJB3O75712 270 aa16.2■□□□□ 0.18
RAB5C-205ENST00000550013 HMBSP08397 361 aa16.2■□□□□ 0.18
RAB5C-205ENST00000550013 HOXB3P14651 431 aaPredicted RBP16.2■□□□□ 0.18
RAB5C-205ENST00000550013 GCLMP48507 274 aa16.2■□□□□ 0.18
RAB5C-205ENST00000550013 PPP3CAQ08209 521 aa16.2■□□□□ 0.18
RAB5C-205ENST00000550013 GEN1Q17RS7 908 aa16.2■□□□□ 0.18
RAB5C-205ENST00000550013 FUT11Q495W5 492 aa16.2■□□□□ 0.18
RAB5C-205ENST00000550013 CCDC186Q7Z3E2 898 aa16.2■□□□□ 0.18
RAB5C-205ENST00000550013 IMPG2Q9BZV3 1241 aa16.2■□□□□ 0.18
RAB5C-205ENST00000550013 NIF3L1Q9GZT8 377 aa16.2■□□□□ 0.18
RAB5C-205ENST00000550013 MMRN2Q9H8L6 949 aa16.2■□□□□ 0.18
RAB5C-205ENST00000550013 CYP3A43Q9HB55 503 aa16.2■□□□□ 0.18
RAB5C-205ENST00000550013 RASAL2Q9UJF2 1139 aa16.2■□□□□ 0.18
RAB5C-205ENST00000550013 RCOR1Q9UKL0 485 aa16.2■□□□□ 0.18
RAB5C-205ENST00000550013 ITPR1Q14643 2758 aa16.2■□□□□ 0.18
RAB5C-205ENST00000550013 A0A1B0GVL5 298 aa16.19■□□□□ 0.18
RAB5C-205ENST00000550013 CALUO43852 315 aaPredicted RBP16.19■□□□□ 0.18
RAB5C-205ENST00000550013 PENKP01210 267 aaPredicted RBP16.19■□□□□ 0.18
RAB5C-205ENST00000550013 PFKFB1P16118 471 aa16.19■□□□□ 0.18
RAB5C-205ENST00000550013 TRIM21P19474 475 aaKnown RBP16.19■□□□□ 0.18
RAB5C-205ENST00000550013 CD6P30203 668 aa16.19■□□□□ 0.18
RAB5C-205ENST00000550013 IL12RB1P42701 662 aa16.19■□□□□ 0.18
RAB5C-205ENST00000550013 MFAP3P55082 362 aa16.19■□□□□ 0.18
RAB5C-205ENST00000550013 ZNF394Q53GI3 561 aa16.19■□□□□ 0.18
RAB5C-205ENST00000550013 SYCP2LQ5T4T6 812 aa16.19■□□□□ 0.18
RAB5C-205ENST00000550013 PPP1R26Q5T8A7 1209 aaPredicted RBP16.19■□□□□ 0.18
RAB5C-205ENST00000550013 FYB2Q5VWT5 728 aa16.19■□□□□ 0.18
RAB5C-205ENST00000550013 RAB44Q7Z6P3 723 aaPredicted RBP16.19■□□□□ 0.18
RAB5C-205ENST00000550013 TOE1Q96GM8 510 aaKnown RBP16.19■□□□□ 0.18
RAB5C-205ENST00000550013 DUSP16Q9BY84 665 aa16.19■□□□□ 0.18
RAB5C-205ENST00000550013 MKRN2Q9H000 416 aaKnown RBP16.19■□□□□ 0.18
RAB5C-205ENST00000550013 FAM124BQ9H5Z6 455 aaPredicted RBP16.19■□□□□ 0.18
RAB5C-205ENST00000550013 PRDM16Q9HAZ2 1276 aa16.19■□□□□ 0.18
RAB5C-205ENST00000550013 TRAF3IP3Q9Y228 551 aa16.19■□□□□ 0.18
RAB5C-205ENST00000550013 SLC27A6Q9Y2P4 619 aa16.19■□□□□ 0.18
RAB5C-205ENST00000550013 USP3Q9Y6I4 520 aa16.19■□□□□ 0.18
RAB5C-205ENST00000550013 H0Y626 953 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 TRIM16O95361 564 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 PRR29P0C7W0 189 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 RALAP11233 206 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 NR2F2P24468 414 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 CORO1AP31146 461 aaKnown RBP16.18■□□□□ 0.18
RAB5C-205ENST00000550013 PSEN1P49768 467 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 EFEMP1Q12805 493 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 GRIK2Q13002 908 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 STARD3Q14849 445 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 WDR45BQ5MNZ6 344 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 ATL3Q6DD88 541 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 TADA2BQ86TJ2 420 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 ZNF276Q8N554 614 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 FOXJ1Q92949 421 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 SNX21Q969T3 373 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 GPR174Q9BXC1 333 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 WSB2Q9NYS7 404 aaPredicted RBP16.18■□□□□ 0.18
RAB5C-205ENST00000550013 CLIC5Q9NZA1 410 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 USP36Q9P275 1121 aaKnown RBP16.18■□□□□ 0.18
RAB5C-205ENST00000550013 THAP10Q9P2Z0 257 aaPredicted RBP16.18■□□□□ 0.18
RAB5C-205ENST00000550013 SUSD2Q9UGT4 822 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 CFAP45Q9UL16 551 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 CLEC4EQ9ULY5 219 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 MAPK8IP1Q9UQF2 711 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 KNL1Q8NG31 2342 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 NUMA1Q14980 2115 aa16.18■□□□□ 0.18
RAB5C-205ENST00000550013 MEI4A8MW99 385 aa16.17■□□□□ 0.18
RAB5C-205ENST00000550013 KCNJ18B7U540 433 aa16.17■□□□□ 0.18
RAB5C-205ENST00000550013 MAPK13O15264 365 aa16.17■□□□□ 0.18
RAB5C-205ENST00000550013 NCAM1P13591 858 aa16.17■□□□□ 0.18
RAB5C-205ENST00000550013 GNSP15586 552 aa16.17■□□□□ 0.18
RAB5C-205ENST00000550013 RDXP35241 583 aaKnown RBP16.17■□□□□ 0.18
RAB5C-205ENST00000550013 ENPP2Q13822 863 aa16.17■□□□□ 0.18
RAB5C-205ENST00000550013 TRIP6Q15654 476 aaKnown RBP16.17■□□□□ 0.18
RAB5C-205ENST00000550013 ZNF423Q2M1K9 1284 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms