RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 USP3Q9Y6I4 520 aa19.87■□□□□ 0.77
BRF1-215ENST00000549655 BCLAF3A2AJT9 711 aaKnown RBP19.86■□□□□ 0.77
BRF1-215ENST00000549655 CFAP69A5D8W1 941 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 DNM1LO00429 736 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 AGTP01019 485 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 AMPD1P23109 780 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 RBL1P28749 1068 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 MDH1P40925 334 aaKnown RBP19.86■□□□□ 0.77
BRF1-215ENST00000549655 OR1G1P47890 313 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 BASP1P80723 227 aaKnown RBP19.86■□□□□ 0.77
BRF1-215ENST00000549655 GAD2Q05329 585 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 FASTKD3Q14CZ7 662 aaKnown RBP19.86■□□□□ 0.77
BRF1-215ENST00000549655 HIF1AQ16665 826 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 HP1BP3Q5SSJ5 553 aaPredicted RBP19.86■□□□□ 0.77
BRF1-215ENST00000549655 MFSD5Q6N075 450 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 LRRC31Q6UY01 552 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 BHLHA9Q7RTU4 235 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 ADAM32Q8TC27 787 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 TMEM161AQ9NX61 479 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 RCOR3Q9P2K3 495 aaPredicted RBP19.86■□□□□ 0.77
BRF1-215ENST00000549655 ALOX15BO15296 676 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 EIF3HO15372 352 aaKnown RBP eCLIP19.86■□□□□ 0.77
BRF1-215ENST00000549655 MYCP01106 439 aaPredicted RBP19.86■□□□□ 0.77
BRF1-215ENST00000549655 NR2C2P49116 596 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 PPARDQ03181 441 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 SLC10A2Q12908 348 aaPredicted RBP19.86■□□□□ 0.77
BRF1-215ENST00000549655 GPNMBQ14956 572 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 RTP4Q96DX8 246 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 TTC25Q96NG3 672 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 SERPINB12Q96P63 405 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 FAM193BQ96PV7 902 aaPredicted RBP19.86■□□□□ 0.77
BRF1-215ENST00000549655 SEZ6LQ9BYH1 1024 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 STMN4Q9H169 189 aaPredicted RBP19.86■□□□□ 0.77
BRF1-215ENST00000549655 DNAJB4Q9UDY4 337 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 SLC12A6Q9UHW9 1150 aa19.86■□□□□ 0.77
BRF1-215ENST00000549655 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.85■□□□□ 0.77
BRF1-215ENST00000549655 TCRBV7S3A2A0A539 114 aa19.85■□□□□ 0.77
BRF1-215ENST00000549655 TMEM189-UBE2V1I3L0A0 370 aa19.85■□□□□ 0.77
BRF1-215ENST00000549655 PDIA2Q13087 525 aaKnown RBP19.85■□□□□ 0.77
BRF1-215ENST00000549655 TNFAIP8L3Q5GJ75 292 aa19.85■□□□□ 0.77
BRF1-215ENST00000549655 NCBP2-AS2Q69YL0 99 aa19.85■□□□□ 0.77
BRF1-215ENST00000549655 PM20D1Q6GTS8 502 aa19.85■□□□□ 0.77
BRF1-215ENST00000549655 ZBED8Q8IZ13 594 aa19.85■□□□□ 0.77
BRF1-215ENST00000549655 DBF4BQ8NFT6 615 aa19.85■□□□□ 0.77
BRF1-215ENST00000549655 LRRN4Q8WUT4 740 aa19.85■□□□□ 0.77
BRF1-215ENST00000549655 ETNK2Q9NVF9 386 aa19.85■□□□□ 0.77
BRF1-215ENST00000549655 PRG3Q9Y2Y8 225 aaPredicted RBP19.85■□□□□ 0.77
BRF1-215ENST00000549655 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.85■□□□□ 0.77
BRF1-215ENST00000549655 SMAPO00193 183 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 ENPP3O14638 875 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 TCEA3O75764 348 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 TMEM63AO94886 807 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 ABHD2P08910 425 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 COL6A1P12109 1028 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 ARL4CP56559 192 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 XRCC4Q13426 336 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 EFHC2Q5JST6 749 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 FAM182AQ5T1J6 154 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 SPATA2LQ8IUW3 424 aaPredicted RBP19.84■□□□□ 0.77
BRF1-215ENST00000549655 CDKL3Q8IVW4 592 aaPredicted RBP19.84■□□□□ 0.77
BRF1-215ENST00000549655 RNF139Q8WU17 664 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 IRGQQ8WZA9 623 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 EDEM1Q92611 657 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 SLC9A7Q96T83 725 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 CCDC77Q9BR77 488 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 WDR6Q9NNW5 1121 aaKnown RBP19.84■□□□□ 0.77
BRF1-215ENST00000549655 PAK5Q9P286 719 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 XPO7Q9UIA9 1087 aaKnown RBP19.84■□□□□ 0.77
BRF1-215ENST00000549655 PTPRDP23468 1912 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 PLEKHG4Q58EX7 1191 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 FNBP1LQ5T0N5 605 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 PNPLA8Q9NP80 782 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 ARHGEF4Q9NR80 690 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 RRN3Q9NYV6 651 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 DTLQ9NZJ0 730 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 MFHAS1Q9Y4C4 1052 aa19.84■□□□□ 0.77
BRF1-215ENST00000549655 NLRC5Q86WI3 1866 aa19.83■□□□□ 0.77
BRF1-215ENST00000549655 A0A087WUV0 522 aaPredicted RBP19.83■□□□□ 0.77
BRF1-215ENST00000549655 H3BRJ5 948 aa19.83■□□□□ 0.77
BRF1-215ENST00000549655 BANF1O75531 89 aa19.83■□□□□ 0.77
BRF1-215ENST00000549655 LSP1P33241 339 aa19.83■□□□□ 0.77
BRF1-215ENST00000549655 ADRA1BP35368 520 aa19.83■□□□□ 0.77
BRF1-215ENST00000549655 STAT4Q14765 748 aa19.83■□□□□ 0.77
BRF1-215ENST00000549655 ZSCAN26Q16670 478 aa19.83■□□□□ 0.77
BRF1-215ENST00000549655 SLC45A4Q5BKX6 768 aa19.83■□□□□ 0.77
BRF1-215ENST00000549655 C4orf50Q6ZRC1 276 aa19.83■□□□□ 0.77
BRF1-215ENST00000549655 CCDC13Q8IYE1 715 aa19.83■□□□□ 0.77
BRF1-215ENST00000549655 ABI1Q8IZP0 508 aa19.83■□□□□ 0.77
BRF1-215ENST00000549655 SCML4Q8N228 414 aa19.83■□□□□ 0.77
BRF1-215ENST00000549655 CCDC33Q8N5R6 958 aa19.83■□□□□ 0.77
BRF1-215ENST00000549655 PGAP3Q96FM1 320 aaPredicted RBP19.83■□□□□ 0.77
BRF1-215ENST00000549655 PHACTR1Q9C0D0 580 aa19.83■□□□□ 0.77
BRF1-215ENST00000549655 ELAC1Q9H777 363 aaKnown RBP19.83■□□□□ 0.77
BRF1-215ENST00000549655 DDIT4Q9NX09 232 aa19.83■□□□□ 0.77
BRF1-215ENST00000549655 PCDHB7Q9Y5E2 793 aa19.83■□□□□ 0.77
BRF1-215ENST00000549655 CREB3O43889 395 aa19.83■□□□□ 0.76
BRF1-215ENST00000549655 OAZ2O95190 189 aa19.83■□□□□ 0.76
BRF1-215ENST00000549655 IVLP07476 585 aa19.83■□□□□ 0.76
BRF1-215ENST00000549655 OR4Q2P0C623 313 aa19.83■□□□□ 0.76
BRF1-215ENST00000549655 AIF1P55008 147 aa19.83■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms