RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 CDH8P55286 799 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 TNNC1P63316 161 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 GOLGA8FQ08AF8 430 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 GOLGA8DPQ0D2H9 430 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 TARDBPQ13148 414 aaKnown RBP eCLIP11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 SURF1Q15526 300 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 GEN1Q17RS7 908 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 KCNT1Q5JUK3 1230 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 LAYNQ6UX15 382 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 PAQR9Q6ZVX9 377 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 WDR49Q8IV35 697 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 IGSF8Q969P0 613 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 DNAJC19Q96DA6 116 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 P2RY11Q96G91 374 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 EPSTI1Q96J88 318 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 TM9SF3Q9HD45 589 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 COMMD8Q9NX08 183 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 THAP10Q9P2Z0 257 aaPredicted RBP11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 NXF1Q9UBU9 619 aaKnown RBP11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 FBXO10Q9UK96 956 aa11.4□□□□□ -0.58
TRAFD1-206ENST00000549358 TEX51A0A1B0GUA7 166 aa11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 FAM92AA1XBS5 289 aa11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 NPC1O15118 1278 aa11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 DLATP10515 647 aaKnown RBP11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 IDEP14735 1019 aa11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 TNNI1P19237 187 aa11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 ACSL1P33121 698 aa11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 ENPP2Q13822 863 aa11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 PCSK4Q6UW60 755 aa11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 USP49Q70CQ1 688 aa11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 FAM35AQ86V20 835 aa11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 RDH13Q8NBN7 331 aa11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 BAP1Q92560 729 aa11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 BIRC7Q96CA5 298 aa11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 DMAP1Q9NPF5 467 aaPredicted RBP11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 TLR8Q9NR97 1041 aaKnown RBP11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 OLFML3Q9NRN5 406 aa11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 NUDT5Q9UKK9 219 aa11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 SLC27A6Q9Y2P4 619 aa11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 KIF3AQ9Y496 699 aa11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 URB1O60287 2271 aaKnown RBP11.39□□□□□ -0.59
TRAFD1-206ENST00000549358 APC2O95996 2303 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 ATP8B3O60423 1300 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 CAPN8A6NHC0 703 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 H3BQV1 296 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 CBX4O00257 560 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 KIAA0391O15091 583 aaKnown RBP11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 AP1G2O75843 785 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 BEST1O76090 585 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 FSBPO95073 299 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 EPHX1P07099 455 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 PRKCHP24723 683 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 GRIA4P48058 902 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 MFAP3P55082 362 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 MYL6P60660 151 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 CXADRP78310 365 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 DNAJC3Q13217 504 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 ZNF234Q14588 700 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 INAVAQ3KP66 663 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 PRAMEF14Q5SWL7 426 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 SV2BQ7L1I2 683 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 ADAT2Q7Z6V5 191 aaKnown RBP11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 GATAD2AQ86YP4 633 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 EFCAB3Q8N7B9 438 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 UCMAQ8WVF2 138 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 SORCS1Q8WY21 1168 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 RNF25Q96BH1 459 aaPredicted RBP11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 CCDC127Q96BQ5 260 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 SMARCD1Q96GM5 515 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 PCED1AQ9H1Q7 454 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 FBXO44Q9H4M3 255 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 OSGEPQ9NPF4 335 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 CYLDQ9NQC7 956 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 OSER1Q9NX31 292 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 ELOVL2Q9NXB9 296 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 CCDC39Q9UFE4 941 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 PCDHGA1Q9Y5H4 931 aa11.38□□□□□ -0.59
TRAFD1-206ENST00000549358 SHROOM3Q8TF72 1996 aa11.37□□□□□ -0.59
TRAFD1-206ENST00000549358 MUC22E2RYF6 1773 aaPredicted RBP11.37□□□□□ -0.59
TRAFD1-206ENST00000549358 PYCARD-AS1I3L0S3 204 aa11.37□□□□□ -0.59
TRAFD1-206ENST00000549358 RIOK3O14730 519 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-206ENST00000549358 MDM4O15151 490 aa11.37□□□□□ -0.59
TRAFD1-206ENST00000549358 LDOC1O95751 146 aaPredicted RBP11.37□□□□□ -0.59
TRAFD1-206ENST00000549358 CTSKP43235 329 aa11.37□□□□□ -0.59
TRAFD1-206ENST00000549358 PLA2G4AP47712 749 aa11.37□□□□□ -0.59
TRAFD1-206ENST00000549358 MAP3K7CLP57077 242 aa11.37□□□□□ -0.59
TRAFD1-206ENST00000549358 ORC1Q13415 861 aa11.37□□□□□ -0.59
TRAFD1-206ENST00000549358 TRPC3Q13507 836 aa11.37□□□□□ -0.59
TRAFD1-206ENST00000549358 ALCAMQ13740 583 aa11.37□□□□□ -0.59
TRAFD1-206ENST00000549358 RTP5Q14D33 572 aa11.37□□□□□ -0.59
TRAFD1-206ENST00000549358 TAF1BQ53T94 588 aaPredicted RBP11.37□□□□□ -0.59
TRAFD1-206ENST00000549358 FYB2Q5VWT5 728 aa11.37□□□□□ -0.59
TRAFD1-206ENST00000549358 RRAGBQ5VZM2 374 aa11.37□□□□□ -0.59
TRAFD1-206ENST00000549358 SERPINA13PQ6UXR4 307 aa11.37□□□□□ -0.59
TRAFD1-206ENST00000549358 FUKQ8N0W3 1084 aa11.37□□□□□ -0.59
TRAFD1-206ENST00000549358 ZMIZ2Q8NF64 920 aa11.37□□□□□ -0.59
TRAFD1-206ENST00000549358 FGF11Q92914 225 aa11.37□□□□□ -0.59
TRAFD1-206ENST00000549358 CNDP2Q96KP4 475 aaKnown RBP11.37□□□□□ -0.59
TRAFD1-206ENST00000549358 TNIP3Q96KP6 325 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms