RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 ATICP31939 592 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 NUCB2P80303 420 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 GAD2Q05329 585 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 CYP24A1Q07973 514 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 DPYDQ12882 1025 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 MDH1BQ5I0G3 518 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 C10orf76Q5T2E6 689 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 EGFLAMQ63HQ2 1017 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 KRBA2Q6ZNG9 492 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 GPR155Q7Z3F1 870 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 NAT16Q8N8M0 369 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 XXYLT1Q8NBI6 393 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 ZNF516Q92618 1163 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 NXPE2Q96DL1 559 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 MRGPRX1Q96LB2 322 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 ACOX2Q99424 681 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 GABRG3Q99928 467 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 DUSP9Q99956 384 aaKnown RBP12.9□□□□□ -0.34
DDX54-206ENST00000549271 MRPL45Q9BRJ2 306 aaKnown RBP12.9□□□□□ -0.34
DDX54-206ENST00000549271 ELOVL4Q9GZR5 314 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 SLC6A17Q9H1V8 727 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 SNX25Q9H3E2 840 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 KCTD10Q9H3F6 313 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 VRTNQ9H8Y1 702 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 EXOC1Q9NV70 894 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 DMAC2Q9NW81 257 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 SMPD4Q9NXE4 827 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 TBC1D14Q9P2M4 693 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 DEC1Q9P2X7 70 aa12.9□□□□□ -0.34
DDX54-206ENST00000549271 MYH10P35580 1976 aa12.89□□□□□ -0.35
DDX54-206ENST00000549271 MEI4A8MW99 385 aa12.89□□□□□ -0.35
DDX54-206ENST00000549271 TRIM24O15164 1050 aa12.89□□□□□ -0.35
DDX54-206ENST00000549271 BCAT2O15382 392 aaPredicted RBP12.89□□□□□ -0.35
DDX54-206ENST00000549271 RPN1P04843 607 aaKnown RBP12.89□□□□□ -0.35
DDX54-206ENST00000549271 DLATP10515 647 aaKnown RBP12.89□□□□□ -0.35
DDX54-206ENST00000549271 CD6P30203 668 aa12.89□□□□□ -0.35
DDX54-206ENST00000549271 WDR72Q3MJ13 1102 aa12.89□□□□□ -0.35
DDX54-206ENST00000549271 PREPLQ4J6C6 727 aaPredicted RBP12.89□□□□□ -0.35
DDX54-206ENST00000549271 TDRD10Q5VZ19 366 aaKnown RBP12.89□□□□□ -0.35
DDX54-206ENST00000549271 HS2ST1Q7LGA3 356 aa12.89□□□□□ -0.35
DDX54-206ENST00000549271 METTL3Q86U44 580 aaKnown RBP12.89□□□□□ -0.35
DDX54-206ENST00000549271 TMPRSS12Q86WS5 348 aa12.89□□□□□ -0.35
DDX54-206ENST00000549271 DDX42Q86XP3 938 aaKnown RBP eCLIP12.89□□□□□ -0.35
DDX54-206ENST00000549271 CADM4Q8NFZ8 388 aa12.89□□□□□ -0.35
DDX54-206ENST00000549271 OR6B3Q8NGW1 331 aa12.89□□□□□ -0.35
DDX54-206ENST00000549271 C1orf216Q8TAB5 229 aa12.89□□□□□ -0.35
DDX54-206ENST00000549271 PLEKHO2Q8TD55 490 aa12.89□□□□□ -0.35
DDX54-206ENST00000549271 TMEM174Q8WUU8 243 aa12.89□□□□□ -0.35
DDX54-206ENST00000549271 OVCA2Q8WZ82 227 aa12.89□□□□□ -0.35
DDX54-206ENST00000549271 OTUB2Q96DC9 234 aa12.89□□□□□ -0.35
DDX54-206ENST00000549271 SLITRK1Q96PX8 696 aa12.89□□□□□ -0.35
DDX54-206ENST00000549271 XYLT2Q9H1B5 865 aa12.89□□□□□ -0.35
DDX54-206ENST00000549271 TMEM30AQ9NV96 361 aa12.89□□□□□ -0.35
DDX54-206ENST00000549271 WSB2Q9NYS7 404 aaPredicted RBP12.89□□□□□ -0.35
DDX54-206ENST00000549271 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.89□□□□□ -0.35
DDX54-206ENST00000549271 COL5A1P20908 1838 aaPredicted RBP12.89□□□□□ -0.35
DDX54-206ENST00000549271 UNC79Q9P2D8 2635 aa12.89□□□□□ -0.35
DDX54-206ENST00000549271 E2F8A0AVK6 867 aa12.88□□□□□ -0.35
DDX54-206ENST00000549271 RRP8O43159 456 aaKnown RBP12.88□□□□□ -0.35
DDX54-206ENST00000549271 RHOBTB3O94955 611 aa12.88□□□□□ -0.35
DDX54-206ENST00000549271 NCAM1P13591 858 aa12.88□□□□□ -0.35
DDX54-206ENST00000549271 CACNA2D1P54289 1103 aa12.88□□□□□ -0.35
DDX54-206ENST00000549271 TNNC1P63316 161 aa12.88□□□□□ -0.35
DDX54-206ENST00000549271 CLDN10P78369 228 aa12.88□□□□□ -0.35
DDX54-206ENST00000549271 TAF10Q12962 218 aa12.88□□□□□ -0.35
DDX54-206ENST00000549271 SUZ12Q15022 739 aaKnown RBP12.88□□□□□ -0.35
DDX54-206ENST00000549271 SNX30Q5VWJ9 437 aa12.88□□□□□ -0.35
DDX54-206ENST00000549271 BTBD8Q5XKL5 378 aa12.88□□□□□ -0.35
DDX54-206ENST00000549271 DHRS13Q6UX07 377 aa12.88□□□□□ -0.35
DDX54-206ENST00000549271 NUDT18Q6ZVK8 323 aa12.88□□□□□ -0.35
DDX54-206ENST00000549271 SLC9A9Q8IVB4 645 aa12.88□□□□□ -0.35
DDX54-206ENST00000549271 CHPFQ8IZ52 775 aa12.88□□□□□ -0.35
DDX54-206ENST00000549271 FMR1NBQ8N0W7 255 aaPredicted RBP12.88□□□□□ -0.35
DDX54-206ENST00000549271 B3GALNT2Q8NCR0 500 aa12.88□□□□□ -0.35
DDX54-206ENST00000549271 PDZD8Q8NEN9 1154 aa12.88□□□□□ -0.35
DDX54-206ENST00000549271 SNIP1Q8TAD8 396 aaKnown RBP12.88□□□□□ -0.35
DDX54-206ENST00000549271 SYAP1Q96A49 352 aaPredicted RBP12.88□□□□□ -0.35
DDX54-206ENST00000549271 CCDC127Q96BQ5 260 aa12.88□□□□□ -0.35
DDX54-206ENST00000549271 ERLEC1Q96DZ1 483 aa12.88□□□□□ -0.35
DDX54-206ENST00000549271 TOE1Q96GM8 510 aaKnown RBP12.88□□□□□ -0.35
DDX54-206ENST00000549271 B3GNT5Q9BYG0 378 aa12.88□□□□□ -0.35
DDX54-206ENST00000549271 IL37Q9NZH6 218 aa12.88□□□□□ -0.35
DDX54-206ENST00000549271 USP36Q9P275 1121 aaKnown RBP12.88□□□□□ -0.35
DDX54-206ENST00000549271 RAD54BQ9Y620 910 aa12.88□□□□□ -0.35
DDX54-206ENST00000549271 TP53BP1Q12888 1972 aaPredicted RBP12.88□□□□□ -0.35
DDX54-206ENST00000549271 FAM92AA1XBS5 289 aa12.87□□□□□ -0.35
DDX54-206ENST00000549271 A8MXQ7 604 aa12.87□□□□□ -0.35
DDX54-206ENST00000549271 ERVH48-1M5A8F1 160 aa12.87□□□□□ -0.35
DDX54-206ENST00000549271 PDXKO00764 312 aa12.87□□□□□ -0.35
DDX54-206ENST00000549271 RTN3O95197 1032 aaPredicted RBP12.87□□□□□ -0.35
DDX54-206ENST00000549271 YWHAQP27348 245 aa12.87□□□□□ -0.35
DDX54-206ENST00000549271 GRK6P43250 576 aa12.87□□□□□ -0.35
DDX54-206ENST00000549271 AP3M2P53677 418 aa12.87□□□□□ -0.35
DDX54-206ENST00000549271 MYL6P60660 151 aa12.87□□□□□ -0.35
DDX54-206ENST00000549271 SEMG2Q02383 582 aa12.87□□□□□ -0.35
DDX54-206ENST00000549271 TRPC3Q13507 836 aa12.87□□□□□ -0.35
DDX54-206ENST00000549271 DCAF12L1Q5VU92 463 aa12.87□□□□□ -0.35
DDX54-206ENST00000549271 SDE2Q6IQ49 451 aa12.87□□□□□ -0.35
DDX54-206ENST00000549271 NUP93Q8N1F7 819 aa12.87□□□□□ -0.35
DDX54-206ENST00000549271 ENGASEQ8NFI3 743 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms