RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 NGRNQ9NPE2 291 aaKnown RBP5.13□□□□□ -1.59
SCAF11-212ENST00000549162 DPP3Q9NY33 737 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 PFDN2Q9UHV9 154 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 TMCO1Q9UM00 188 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 HYOU1Q9Y4L1 999 aa5.13□□□□□ -1.59
SCAF11-212ENST00000549162 CPAMD8Q8IZJ3 1885 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 H3BQF6 201 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 EPHB6O15197 1021 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 CLDN3O15551 220 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 PEX10O60683 326 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 SHOX2O60902 331 aaPredicted RBP5.12□□□□□ -1.59
SCAF11-212ENST00000549162 HSF2BPO75031 334 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 SLURP2P0DP57 97 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 HNRNPLP14866 589 aaKnown RBP eCLIP5.12□□□□□ -1.599e-6■□□□□ 8.2
SCAF11-212ENST00000549162 HOXB8P17481 243 aaPredicted RBP5.12□□□□□ -1.59
SCAF11-212ENST00000549162 C21orf58P58505 322 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 CCL14Q16627 93 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 FAM173BQ6P4H8 233 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 SPATC1Q76KD6 591 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 MYCT1Q8N699 235 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 ART4Q93070 314 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 TUBGCP5Q96RT8 1024 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 ZIM2Q9NZV7 527 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 PCDH10Q9P2E7 1040 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 DKK3Q9UBP4 350 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 CDC23Q9UJX2 597 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 TELO2Q9Y4R8 837 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 DYNC1I1O14576 645 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 TEX33O43247 280 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 TNNC2P02585 160 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 FYNP06241 537 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 CD53P19397 219 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 RPL22P35268 128 aaKnown RBP5.12□□□□□ -1.59
SCAF11-212ENST00000549162 MMP13P45452 471 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 CCR3P51677 355 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 WDR5P61964 334 aaKnown RBP5.12□□□□□ -1.59
SCAF11-212ENST00000549162 MYO1EQ12965 1108 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 RAB30Q15771 203 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 ASIC2Q16515 512 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 PTGISQ16647 500 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 DUPD1Q68J44 220 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 JADE1Q6IE81 842 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 MOB2Q70IA6 237 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 C16orf59Q7L2K0 433 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 MYO1HQ8N1T3 1032 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 GLIS3Q8NEA6 775 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 GOLGA1Q92805 767 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 LRIG1Q96JA1 1093 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 SHCBP1LQ9BZQ2 653 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 EPHX3Q9H6B9 360 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 ARL5CA6NH57 179 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 FZD7O75084 574 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 GBP2P32456 591 aaPredicted RBP5.12□□□□□ -1.59
SCAF11-212ENST00000549162 ADRA1AP35348 466 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 NDUFV1P49821 464 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 SLC6A3Q01959 620 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 ADCY2Q08462 1091 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 TMEM240Q5SV17 173 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 FYB2Q5VWT5 728 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 SH2D5Q6ZV89 423 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 LUZP1Q86V48 1076 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 TAX1BP1Q86VP1 789 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 FBXO15Q8NCQ5 510 aaPredicted RBP5.12□□□□□ -1.59
SCAF11-212ENST00000549162 ZMIZ2Q8NF64 920 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 COG1Q8WTW3 980 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 ECHDC3Q96DC8 303 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 ALG14Q96F25 216 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 SMARCD1Q96GM5 515 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 RSRP1Q9BUV0 290 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 KLF16Q9BXK1 252 aaPredicted RBP5.12□□□□□ -1.59
SCAF11-212ENST00000549162 FBXO44Q9H4M3 255 aa5.12□□□□□ -1.59
SCAF11-212ENST00000549162 LRRC53A6NM62 1247 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 KATNA1O75449 491 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 ECI2O75521 394 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 SLC2A3P11169 496 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 MYCLP1P12525 358 aaPredicted RBP5.11□□□□□ -1.59
SCAF11-212ENST00000549162 CHRNA3P32297 505 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 MATKP42679 507 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 TKTL1P51854 596 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 SEMA5AQ13591 1074 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 PDPK2PQ6A1A2 396 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 SYNPOQ8N3V7 929 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 ARFGAP1Q8N6T3 406 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 GPR161Q8N6U8 529 aaKnown RBP5.11□□□□□ -1.59
SCAF11-212ENST00000549162 CD99L2Q8TCZ2 262 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 PSMG2Q969U7 264 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 RBM41Q96IZ5 413 aaKnown RBP5.11□□□□□ -1.59
SCAF11-212ENST00000549162 ADPGKQ9BRR6 497 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 CNPY3Q9BT09 278 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 MSTO1Q9BUK6 570 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 COLEC11Q9BWP8 271 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 CPEB1Q9BZB8 566 aaKnown RBP5.11□□□□□ -1.59
SCAF11-212ENST00000549162 IL21Q9HBE4 155 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 IFNKQ9P0W0 207 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 DNAJC12Q9UKB3 198 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 ARHGAP26Q9UNA1 814 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 GOLGA6L4A6NEF3 574 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 GIPC1O14908 333 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 CHADO15335 359 aa5.11□□□□□ -1.59
SCAF11-212ENST00000549162 SLC7A4O43246 635 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms