RNA–Protein interactions for RNA: ENST00000548350.1

ASIC1-204, Transcript of acid sensing ion channel subunit 1, human

TSL 4

Gene ASIC1, Length 560 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ASIC1-204	ENST00000548350	FAM149B1	Q96BN6	582 aa		11.12	□□□□□ -0.63
ASIC1-204	ENST00000548350	PLD4	Q96BZ4	506 aa		11.12	□□□□□ -0.63
ASIC1-204	ENST00000548350	CHFR	Q96EP1	664 aa		11.12	□□□□□ -0.63
ASIC1-204	ENST00000548350	ZFR	Q96KR1	1074 aa	Known RBP	11.12	□□□□□ -0.63
ASIC1-204	ENST00000548350	BBS2	Q9BXC9	721 aa		11.12	□□□□□ -0.63
ASIC1-204	ENST00000548350	ARHGEF4	Q9NR80	690 aa		11.12	□□□□□ -0.63
ASIC1-204	ENST00000548350	USP18	Q9UMW8	372 aa		11.12	□□□□□ -0.63
ASIC1-204	ENST00000548350	SMG5	Q9UPR3	1016 aa	Known RBP	11.12	□□□□□ -0.63
ASIC1-204	ENST00000548350	HBS1L	Q9Y450	684 aa	Known RBP	11.12	□□□□□ -0.63
ASIC1-204	ENST00000548350	DAAM1	Q9Y4D1	1078 aa		11.12	□□□□□ -0.63
ASIC1-204	ENST00000548350	SHISA7	A6NL88	538 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	YJEFN3	A6XGL0	299 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350		E7ENQ6	273 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	NEDD8-MDP1	E9PL57	170 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	RNF40	O75150	1001 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	STC2	O76061	302 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	LTF	P02788	710 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	NCAM1	P13591	858 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	CORO1A	P31146	461 aa	Known RBP	11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	GPD2	P43304	727 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	DAOA	P59103	153 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	ANO6	Q4KMQ2	910 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	CDKAL1	Q5VV42	579 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	SDE2	Q6IQ49	451 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	DENND1B	Q6P3S1	775 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	TPGS1	Q6ZTW0	290 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	C11orf57	Q6ZUT1	292 aa	Predicted RBP	11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	TMEM25	Q86YD3	366 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	DENND1C	Q8IV53	801 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	UNC45B	Q8IWX7	931 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	NAT16	Q8N8M0	369 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	NEK11	Q8NG66	645 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	IPO4	Q8TEX9	1081 aa	Known RBP	11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	NDRG1	Q92597	394 aa	Known RBP	11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	SPAG5	Q96R06	1193 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	DDX50	Q9BQ39	737 aa	Known RBP	11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	STK33	Q9BYT3	514 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	PLCB1	Q9NQ66	1216 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	TMEM63C	Q9P1W3	806 aa		11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	CDV3	Q9UKY7	258 aa	Known RBP	11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	KMT2B	Q9UMN6	2715 aa	Predicted RBP	11.11	□□□□□ -0.63
ASIC1-204	ENST00000548350	MYO18A	Q92614	2054 aa	Known RBP	11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	HOXC11	O43248	304 aa	Predicted RBP	11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	KAT7	O95251	611 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	CALCA	P01258	141 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	CCDC172	P0C7W6	258 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	TYR	P14679	529 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	UCHL3	P15374	230 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	SDHB	P21912	280 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	CNR2	P34972	360 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	TNFRSF4	P43489	277 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	SLC11A2	P49281	568 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	ZNF165	P49910	485 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	COPB1	P53618	953 aa	Known RBP	11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	ZNF445	P59923	1031 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	MRPS21	P82921	87 aa	Known RBP	11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	SATB1	Q01826	763 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	APBA1	Q02410	837 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	SYCP1	Q15431	976 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	LPAL2	Q16609	132 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	KLHL40	Q2TBA0	621 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	C2orf27A	Q580R0	203 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	EFHC1	Q5JVL4	640 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	NUGGC	Q68CJ6	796 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	GRAMD4	Q6IC98	578 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350		Q6ZS52	159 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	TRMT11	Q7Z4G4	463 aa	Known RBP	11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	CCDC117	Q8IWD4	279 aa	Predicted RBP	11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	FAM71A	Q8IYT1	594 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	AOPEP	Q8N6M6	819 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	GPR161	Q8N6U8	529 aa	Known RBP	11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	TMEM35B	Q8NCS4	154 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	RPLP0P6	Q8NHW5	317 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	PPP1R13B	Q96KQ4	1090 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	BPIFA3	Q9BQP9	254 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	LHX5	Q9H2C1	402 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	FBRSL1	Q9HCM7	1045 aa	Known RBP	11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	SIX2	Q9NPC8	291 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	PRMT8	Q9NR22	394 aa	Predicted RBP	11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	FAM207A	Q9NSI2	230 aa	Predicted RBP	11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	DNAJC17	Q9NVM6	304 aa	Known RBP	11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	LIMA1	Q9UHB6	759 aa	Known RBP	11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	SFMBT1	Q9UHJ3	866 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	SLC12A6	Q9UHW9	1150 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	PCDHGC3	Q9UN70	934 aa		11.1	□□□□□ -0.63
ASIC1-204	ENST00000548350	CNOT1	A5YKK6	2376 aa	Known RBP	11.09	□□□□□ -0.63
ASIC1-204	ENST00000548350	TYW5	A2RUC4	315 aa	Known RBP	11.09	□□□□□ -0.63
ASIC1-204	ENST00000548350	PRR5-ARHGAP8	B1AHC4	643 aa		11.09	□□□□□ -0.63
ASIC1-204	ENST00000548350	CHURC1-FNTB	B4DL54	471 aa		11.09	□□□□□ -0.63
ASIC1-204	ENST00000548350	TULP3	O75386	442 aa		11.09	□□□□□ -0.63
ASIC1-204	ENST00000548350	ALDH1A2	O94788	518 aa		11.09	□□□□□ -0.63
ASIC1-204	ENST00000548350	PAPSS2	O95340	614 aa	Predicted RBP	11.09	□□□□□ -0.63
ASIC1-204	ENST00000548350	CAVIN2	O95810	425 aa		11.09	□□□□□ -0.63
ASIC1-204	ENST00000548350	GBP1	P32455	592 aa		11.09	□□□□□ -0.63
ASIC1-204	ENST00000548350	OPRD1	P41143	372 aa		11.09	□□□□□ -0.63
ASIC1-204	ENST00000548350	STAT1	P42224	750 aa		11.09	□□□□□ -0.63
ASIC1-204	ENST00000548350	SLC6A11	P48066	632 aa		11.09	□□□□□ -0.63
ASIC1-204	ENST00000548350	SEC13	P55735	322 aa		11.09	□□□□□ -0.63
ASIC1-204	ENST00000548350	TBX4	P57082	545 aa		11.09	□□□□□ -0.63
ASIC1-204	ENST00000548350	POLR2F	P61218	127 aa	Known RBP	11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms