RNA–Protein interactions for RNA: ENST00000548068.5

RAB5B-204, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-204ENST00000548068 APOC2P02655 101 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 CSH1P0DML2 217 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 CSH2P0DML3 217 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 CTSAP10619 480 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 RPL17P18621 184 aaKnown RBP12.86□□□□□ -0.35
RAB5B-204ENST00000548068 TGM2P21980 687 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 L1CAMP32004 1257 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 ALDH1A3P47895 512 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 CXCR3P49682 368 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 GPR15P49685 360 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 SLC7A5Q01650 507 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 PLD1Q13393 1074 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 NNTQ13423 1086 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 RAB6CQ53S08 254 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 PPP6R3Q5H9R7 873 aaPredicted RBP12.86□□□□□ -0.35
RAB5B-204ENST00000548068 BRMS1LQ5PSV4 323 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 TADA2BQ86TJ2 420 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 TAC4Q86UU9 113 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 JAMLQ86YT9 394 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 TTC9BQ8N6N2 239 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 CCDC185Q8N715 623 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 CCHCR1Q8TD31 782 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 C1orf54Q8WWF1 131 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 DPF3Q92784 378 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 RNF34Q969K3 372 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 FAF2Q96CS3 445 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 CCDC114Q96M63 670 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 RNF157Q96PX1 679 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 HERPUD2Q9BSE4 406 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 FAM129AQ9BZQ8 928 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 RAB6CQ9H0N0 254 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 RXFP1Q9HBX9 757 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 EPB41L5Q9HCM4 733 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 GDF3Q9NR23 364 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 PIGVQ9NUD9 493 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 GPATCH2LQ9NWQ4 482 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 COX16Q9P0S2 106 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 FBXW11Q9UKB1 542 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 SLC27A5Q9Y2P5 690 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 NR2E3Q9Y5X4 410 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 PLXNA4Q9HCM2 1894 aa12.86□□□□□ -0.35
RAB5B-204ENST00000548068 PRRG1O14668 218 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 NDC80O14777 642 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 APOL1O14791 398 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 MCF2LO15068 1137 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 ADAM12O43184 909 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 IRAK2O43187 625 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 LIASO43766 372 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 ZNF189O75820 626 aaPredicted RBP12.85□□□□□ -0.35
RAB5B-204ENST00000548068 IGLV3-25P01717 112 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 SLC2A3P11169 496 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 HTR7P34969 479 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 CTNNB1P35222 781 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 ADRA1BP35368 520 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 BMPR1AP36894 532 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 CLCN6P51797 869 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 VCPP55072 806 aaKnown RBP12.85□□□□□ -0.35
RAB5B-204ENST00000548068 UBE3AQ05086 875 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 MTA1Q13330 715 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 BYSLQ13895 437 aaKnown RBP12.85□□□□□ -0.35
RAB5B-204ENST00000548068 LLGL1Q15334 1064 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 PPP1R7Q15435 360 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 TAF12Q16514 161 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 ANKRD20A8PQ5CZ79 823 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 ZC3H12AQ5D1E8 599 aaKnown RBP12.85□□□□□ -0.35
RAB5B-204ENST00000548068 RASIP1Q5U651 963 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 SDHAF4Q5VUM1 108 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 TTC27Q6P3X3 843 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 MTERF4Q7Z6M4 381 aaKnown RBP12.85□□□□□ -0.35
RAB5B-204ENST00000548068 SCD5Q86SK9 330 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 TCEAL8Q8IYN2 117 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 ZDHHC14Q8IZN3 488 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 HDAC7Q8WUI4 952 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 NKD2Q969F2 451 aaPredicted RBP12.85□□□□□ -0.35
RAB5B-204ENST00000548068 KCTD15Q96SI1 283 aaPredicted RBP12.85□□□□□ -0.35
RAB5B-204ENST00000548068 ERP44Q9BS26 406 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 ADAM33Q9BZ11 813 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 WDCPQ9H6R7 721 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 CYP4F11Q9HBI6 524 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 WDR6Q9NNW5 1121 aaKnown RBP12.85□□□□□ -0.35
RAB5B-204ENST00000548068 GMIPQ9P107 970 aa12.85□□□□□ -0.35
RAB5B-204ENST00000548068 DRG1Q9Y295 367 aaKnown RBP12.85□□□□□ -0.35
RAB5B-204ENST00000548068 R3HDM2Q9Y2K5 976 aaKnown RBP12.85□□□□□ -0.35
RAB5B-204ENST00000548068 BHMG1C9JSJ3 638 aaPredicted RBP12.84□□□□□ -0.35
RAB5B-204ENST00000548068 LPXNO60711 386 aa12.84□□□□□ -0.35
RAB5B-204ENST00000548068 ITGAVP06756 1048 aa12.84□□□□□ -0.35
RAB5B-204ENST00000548068 ADH1AP07327 375 aa12.84□□□□□ -0.35
RAB5B-204ENST00000548068 CD48P09326 243 aa12.84□□□□□ -0.35
RAB5B-204ENST00000548068 LINC00271P0C7V0 271 aa12.84□□□□□ -0.35
RAB5B-204ENST00000548068 ATF6P18850 670 aa12.84□□□□□ -0.35
RAB5B-204ENST00000548068 DNAJB2P25686 324 aa12.84□□□□□ -0.35
RAB5B-204ENST00000548068 CCR1P32246 355 aa12.84□□□□□ -0.35
RAB5B-204ENST00000548068 CA8P35219 290 aa12.84□□□□□ -0.35
RAB5B-204ENST00000548068 PTGIRP43119 386 aa12.84□□□□□ -0.35
RAB5B-204ENST00000548068 PPP3CCP48454 512 aa12.84□□□□□ -0.35
RAB5B-204ENST00000548068 KPNA1P52294 538 aaPredicted RBP12.84□□□□□ -0.35
RAB5B-204ENST00000548068 ATXN1P54253 815 aaKnown RBP12.84□□□□□ -0.35
RAB5B-204ENST00000548068 DRG2P55039 364 aaKnown RBP12.84□□□□□ -0.35
RAB5B-204ENST00000548068 USP46P62068 366 aa12.84□□□□□ -0.35
RAB5B-204ENST00000548068 DYNLT1P63172 113 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms