RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 COG7P83436 770 aa14□□□□□ -0.17
CPSF6-204ENST00000547486 FYB2Q5VWT5 728 aa14□□□□□ -0.17
CPSF6-204ENST00000547486 RNF43Q68DV7 783 aa14□□□□□ -0.17
CPSF6-204ENST00000547486 NUDT18Q6ZVK8 323 aa14□□□□□ -0.17
CPSF6-204ENST00000547486 TRMT11Q7Z4G4 463 aaKnown RBP14□□□□□ -0.17
CPSF6-204ENST00000547486 DENND1CQ8IV53 801 aa14□□□□□ -0.17
CPSF6-204ENST00000547486 ELOA2Q8IYF1 753 aaPredicted RBP14□□□□□ -0.17
CPSF6-204ENST00000547486 TFAP2BQ92481 460 aa14□□□□□ -0.17
CPSF6-204ENST00000547486 PIGKQ92643 395 aa14□□□□□ -0.17
CPSF6-204ENST00000547486 LSM14BQ9BX40 385 aaKnown RBP14□□□□□ -0.17
CPSF6-204ENST00000547486 ULBP1Q9BZM6 244 aa14□□□□□ -0.17
CPSF6-204ENST00000547486 TMEM74BQ9NUR3 256 aa14□□□□□ -0.17
CPSF6-204ENST00000547486 MARCH2Q9P0N8 246 aa14□□□□□ -0.17
CPSF6-204ENST00000547486 TSPAN16Q9UKR8 245 aa14□□□□□ -0.17
CPSF6-204ENST00000547486 RAD54BQ9Y620 910 aa14□□□□□ -0.17
CPSF6-204ENST00000547486 RALGAPA1Q6GYQ0 2036 aa14□□□□□ -0.17
CPSF6-204ENST00000547486 SLC12A8A0AV02 714 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 C4orf47A7E2U8 309 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 PSMA7O14818 248 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 XPO1O14980 1071 aaKnown RBP13.99□□□□□ -0.17
CPSF6-204ENST00000547486 KHNYNO15037 678 aaKnown RBP13.99□□□□□ -0.17
CPSF6-204ENST00000547486 MAP3K13O43283 966 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 GADD45BO75293 160 aaPredicted RBP13.99□□□□□ -0.17
CPSF6-204ENST00000547486 PENKP01210 267 aaPredicted RBP13.99□□□□□ -0.17
CPSF6-204ENST00000547486 CALCAP01258 141 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 VDRP11473 427 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 HOXB2P14652 356 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 CD19P15391 556 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 PKDCCQ504Y2 493 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 SGO2Q562F6 1265 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 N4BP2L1Q5TBK1 243 aaPredicted RBP13.99□□□□□ -0.17
CPSF6-204ENST00000547486 TTI2Q6NXR4 508 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 ARMCX6Q7L4S7 300 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 LPCAT2Q7L5N7 544 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 CYP2U1Q7Z449 544 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 CHPFQ8IZ52 775 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 ARHGAP18Q8N392 663 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 DEFB119Q8N690 84 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 LMO3Q8TAP4 145 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 DDX1Q92499 740 aaKnown RBP13.99□□□□□ -0.17
CPSF6-204ENST00000547486 KAT5Q92993 513 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 CDK5RAP1Q96SZ6 601 aaKnown RBP13.99□□□□□ -0.17
CPSF6-204ENST00000547486 GABRG3Q99928 467 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 ZSWIM1Q9BR11 485 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 EDEM2Q9BV94 578 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 GTPBP4Q9BZE4 634 aaKnown RBP13.99□□□□□ -0.17
CPSF6-204ENST00000547486 SLC6A17Q9H1V8 727 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 CACNA2D2Q9NY47 1150 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 HOOK1Q9UJC3 728 aaKnown RBP13.99□□□□□ -0.17
CPSF6-204ENST00000547486 CLEC4EQ9ULY5 219 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 ZNF510Q9Y2H8 683 aa13.99□□□□□ -0.17
CPSF6-204ENST00000547486 SPAG17Q6Q759 2223 aa13.98□□□□□ -0.17
CPSF6-204ENST00000547486 YJEFN3A6XGL0 299 aa13.98□□□□□ -0.17
CPSF6-204ENST00000547486 E7ENQ6 273 aa13.98□□□□□ -0.17
CPSF6-204ENST00000547486 O00370 1275 aa13.98□□□□□ -0.17
CPSF6-204ENST00000547486 CDX4O14627 284 aaPredicted RBP13.98□□□□□ -0.17
CPSF6-204ENST00000547486 KCNA4P22459 653 aa13.98□□□□□ -0.17
CPSF6-204ENST00000547486 SLC8A3P57103 927 aa13.98□□□□□ -0.17
CPSF6-204ENST00000547486 MORC3Q14149 939 aa13.98□□□□□ -0.17
CPSF6-204ENST00000547486 GEN1Q17RS7 908 aa13.98□□□□□ -0.17
CPSF6-204ENST00000547486 KLHL10Q6JEL2 608 aa13.98□□□□□ -0.17
CPSF6-204ENST00000547486 RSRC2Q7L4I2 434 aaKnown RBP13.98□□□□□ -0.17
CPSF6-204ENST00000547486 IPO4Q8TEX9 1081 aaKnown RBP13.98□□□□□ -0.17
CPSF6-204ENST00000547486 EDEM1Q92611 657 aa13.98□□□□□ -0.17
CPSF6-204ENST00000547486 CEP63Q96MT8 703 aa13.98□□□□□ -0.17
CPSF6-204ENST00000547486 DCLK3Q9C098 648 aa13.98□□□□□ -0.17
CPSF6-204ENST00000547486 METTL14Q9HCE5 456 aaKnown RBP13.98□□□□□ -0.17
CPSF6-204ENST00000547486 CALCOCO1Q9P1Z2 691 aa13.98□□□□□ -0.17
CPSF6-204ENST00000547486 SFMBT1Q9UHJ3 866 aa13.98□□□□□ -0.17
CPSF6-204ENST00000547486 KIAA1257Q9ULG3 409 aa13.98□□□□□ -0.17
CPSF6-204ENST00000547486 MYH10P35580 1976 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 BIN1O00499 593 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 PMM2O15305 246 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 NDUFV2P19404 249 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 CHKAP35790 457 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 BCAT1P54687 386 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 MFAP3P55082 362 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 ADIGQ0VDE8 80 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 BST2Q10589 180 aaKnown RBP13.97□□□□□ -0.17
CPSF6-204ENST00000547486 STIM1Q13586 685 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 BYSLQ13895 437 aaKnown RBP13.97□□□□□ -0.17
CPSF6-204ENST00000547486 TRIP4Q15650 581 aaPredicted RBP13.97□□□□□ -0.17
CPSF6-204ENST00000547486 CCDC40Q4G0X9 1142 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 BSPRYQ5W0U4 402 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 SDE2Q6IQ49 451 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 TMEM270Q6UE05 265 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 LCLAT1Q6UWP7 414 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 FMNL3Q8IVF7 1028 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 SLC35F5Q8WV83 523 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 NELFBQ8WX92 580 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 KCTD13Q8WZ19 329 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 PIWIL1Q96J94 861 aaKnown RBP13.97□□□□□ -0.17
CPSF6-204ENST00000547486 SPACA7Q96KW9 195 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 LRRC4Q9HBW1 653 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 CD93Q9NPY3 652 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 HESX1Q9UBX0 185 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 STRIP2Q9ULQ0 834 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 SLC27A6Q9Y2P4 619 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 PCDHB4Q9Y5E5 795 aa13.97□□□□□ -0.17
CPSF6-204ENST00000547486 IGHV1OR15-9A0A0B4J2B8 117 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms