RNA–Protein interactions for RNA: ENST00000547259.1

HDAC7-226, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-226ENST00000547259 SDHAF4Q5VUM1 108 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 IL31Q6EBC2 164 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 PIGZQ86VD9 579 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 TMEM139Q8IV31 216 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 ZMIZ2Q8NF64 920 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 CCDC26Q8TAB7 109 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 OLIG1Q8TAK6 271 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 IPO4Q8TEX9 1081 aaKnown RBP12.67□□□□□ -0.38
HDAC7-226ENST00000547259 C8orf48Q96LL4 319 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 CNTNAP3BQ96NU0 1288 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 KCNK16Q96T55 309 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 CNTNAP3Q9BZ76 1288 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 SYNCQ9H7C4 482 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 KIF9Q9HAQ2 790 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 ST7Q9NRC1 585 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 TMEM30AQ9NV96 361 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 GTSE1Q9NYZ3 720 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 ADAMTS1Q9UHI8 967 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 OBSL1O75147 1896 aa12.67□□□□□ -0.38
HDAC7-226ENST00000547259 KIF26AQ9ULI4 1882 aaPredicted RBP12.67□□□□□ -0.38
HDAC7-226ENST00000547259 A0A087X0T9 212 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 K7ESF4 209 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 NRG2O14511 850 aaPredicted RBP12.66□□□□□ -0.38
HDAC7-226ENST00000547259 FAM228BP0C875 321 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 UNGP13051 313 aaPredicted RBP12.66□□□□□ -0.38
HDAC7-226ENST00000547259 ATF6P18850 670 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 LIMK1P53667 647 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 CENPCQ03188 943 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 IFRD2Q12894 506 aaPredicted RBP12.66□□□□□ -0.38
HDAC7-226ENST00000547259 PDCLQ13371 301 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 GAS6Q14393 721 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 SLC18A3Q16572 532 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 PPM1JQ5JR12 505 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 PPP1R2P3Q6NXS1 205 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 CC2D1AQ6P1N0 951 aaPredicted RBP12.66□□□□□ -0.38
HDAC7-226ENST00000547259 CCDC170Q8IYT3 715 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 CMTM8Q8IZV2 173 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 CAMKK1Q8N5S9 505 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 C12orf50Q8NA57 414 aaPredicted RBP12.66□□□□□ -0.38
HDAC7-226ENST00000547259 STKLD1Q8NE28 680 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 SLC30A5Q8TAD4 765 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 GIPC2Q8TF65 315 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 SLC35F5Q8WV83 523 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 CPA5Q8WXQ8 436 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 LRRC4Q9HBW1 653 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 PNPLA8Q9NP80 782 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 SPTLC3Q9NUV7 552 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 UXTQ9UBK9 157 aaPredicted RBP12.66□□□□□ -0.38
HDAC7-226ENST00000547259 CYTH4Q9UIA0 394 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 SLC8A2Q9UPR5 921 aa12.66□□□□□ -0.38
HDAC7-226ENST00000547259 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.66□□□□□ -0.38
HDAC7-226ENST00000547259 PIK3R2O00459 728 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 ARHGAP6O43182 974 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 RTN2O75298 545 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 IPO7O95373 1038 aaKnown RBP12.65□□□□□ -0.38
HDAC7-226ENST00000547259 CSH1P0DML2 217 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 CSH2P0DML3 217 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 LCP1P13796 627 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 ACADSBP45954 432 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 SLC5A3P53794 718 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 SNX16P57768 344 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 CCZ1BP86790 482 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 CCZ1P86791 482 aaPredicted RBP12.65□□□□□ -0.38
HDAC7-226ENST00000547259 ADIGQ0VDE8 80 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 MTF1Q14872 753 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 PON2Q15165 354 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 ASTE1Q2TB18 679 aaPredicted RBP12.65□□□□□ -0.38
HDAC7-226ENST00000547259 FBXO43Q4G163 708 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 PTPN20Q4JDL3 420 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 CCDC122Q5T0U0 273 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 HEATR6Q6AI08 1181 aaKnown RBP12.65□□□□□ -0.38
HDAC7-226ENST00000547259 ACAD10Q6JQN1 1059 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 PMF1Q6P1K2 205 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 RAD9BQ6WBX8 426 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 MMS22LQ6ZRQ5 1243 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 DENND5BQ6ZUT9 1274 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 GPRIN1Q7Z2K8 1008 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 ERICH1Q86X53 443 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 NUP93Q8N1F7 819 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 SIX6OS1Q8N1H7 587 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 WDTC1Q8N5D0 677 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 FAM160A2Q8N612 972 aaPredicted RBP12.65□□□□□ -0.38
HDAC7-226ENST00000547259 STK32AQ8WU08 396 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 KCTD13Q8WZ19 329 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 MRPS31Q92665 395 aaKnown RBP12.65□□□□□ -0.38
HDAC7-226ENST00000547259 RSPRY1Q96DX4 576 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 PPP1R13BQ96KQ4 1090 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 SPATA17Q96L03 361 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 HSFY1Q96LI6 401 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 CPXM1Q96SM3 734 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 C11orf70Q9BRQ4 267 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 UBXN6Q9BZV1 441 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 CYLDQ9NQC7 956 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 GKN1Q9NS71 199 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 RBM12Q9NTZ6 932 aaKnown RBP12.65□□□□□ -0.38
HDAC7-226ENST00000547259 TAS2R14Q9NYV8 317 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 NAGPAQ9UK23 515 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 PCDHGA5Q9Y5G8 931 aa12.65□□□□□ -0.38
HDAC7-226ENST00000547259 CEP295Q9C0D2 2601 aa12.64□□□□□ -0.39
HDAC7-226ENST00000547259 HHLA1C9JL84 531 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms