RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 K7EQS6 105 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 PIK3R2O00459 728 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 TULP3O75386 442 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 LATS1O95835 1130 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 KLKB1P03952 638 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 HMBSP08397 361 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 CNR2P34972 360 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 TNFRSF4P43489 277 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 BPIFB4P59827 614 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 MRPS21P82921 87 aaKnown RBP16.61■□□□□ 0.25
DDX54-204ENST00000546898 KDSRQ06136 332 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 PDCLQ13371 301 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 TRIP4Q15650 581 aaPredicted RBP16.61■□□□□ 0.25
DDX54-204ENST00000546898 HSF5Q4G112 596 aaPredicted RBP16.61■□□□□ 0.25
DDX54-204ENST00000546898 FKBP15Q5T1M5 1219 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 KLHDC7AQ5VTJ3 777 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 BEND5Q7L4P6 421 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 FAM71AQ8IYT1 594 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 CPXM2Q8N436 756 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 CAMKK1Q8N5S9 505 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 USP33Q8TEY7 942 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 CLEC4CQ8WTT0 213 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 LSM14BQ9BX40 385 aaKnown RBP16.61■□□□□ 0.25
DDX54-204ENST00000546898 NAT10Q9H0A0 1025 aaKnown RBP16.61■□□□□ 0.25
DDX54-204ENST00000546898 VPS16Q9H269 839 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 FHOD1Q9Y613 1164 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 VPS13AQ96RL7 3174 aa16.61■□□□□ 0.25
DDX54-204ENST00000546898 PTPRZ1P23471 2315 aaPredicted RBP16.61■□□□□ 0.25
DDX54-204ENST00000546898 EP300Q09472 2414 aaPredicted RBP16.6■□□□□ 0.25
DDX54-204ENST00000546898 FOXN3O00409 490 aaPredicted RBP16.6■□□□□ 0.25
DDX54-204ENST00000546898 TYRP14679 529 aa16.6■□□□□ 0.25
DDX54-204ENST00000546898 UCHL3P15374 230 aa16.6■□□□□ 0.25
DDX54-204ENST00000546898 CLCN1P35523 988 aa16.6■□□□□ 0.25
DDX54-204ENST00000546898 HARS2P49590 506 aaKnown RBP16.6■□□□□ 0.25
DDX54-204ENST00000546898 RAPGEF1Q13905 1077 aa16.6■□□□□ 0.25
DDX54-204ENST00000546898 DRAP1Q14919 205 aaPredicted RBP16.6■□□□□ 0.25
DDX54-204ENST00000546898 GRAMD4Q6IC98 578 aa16.6■□□□□ 0.25
DDX54-204ENST00000546898 TPGS1Q6ZTW0 290 aa16.6■□□□□ 0.25
DDX54-204ENST00000546898 TMEM110Q86TL2 294 aa16.6■□□□□ 0.25
DDX54-204ENST00000546898 WDR5BQ86VZ2 330 aa16.6■□□□□ 0.25
DDX54-204ENST00000546898 FAM217AQ8IXS0 508 aa16.6■□□□□ 0.25
DDX54-204ENST00000546898 NAT16Q8N8M0 369 aa16.6■□□□□ 0.25
DDX54-204ENST00000546898 TERB1Q8NA31 727 aa16.6■□□□□ 0.25
DDX54-204ENST00000546898 SUMF1Q8NBK3 374 aa16.6■□□□□ 0.25
DDX54-204ENST00000546898 NOX5Q96PH1 765 aa16.6■□□□□ 0.25
DDX54-204ENST00000546898 NAA15Q9BXJ9 866 aaKnown RBP16.6■□□□□ 0.25
DDX54-204ENST00000546898 MIS12Q9H081 205 aa16.6■□□□□ 0.25
DDX54-204ENST00000546898 LHX5Q9H2C1 402 aa16.6■□□□□ 0.25
DDX54-204ENST00000546898 LIMA1Q9UHB6 759 aaKnown RBP16.6■□□□□ 0.25
DDX54-204ENST00000546898 CYTH4Q9UIA0 394 aa16.6■□□□□ 0.25
DDX54-204ENST00000546898 AGO1Q9UL18 857 aaKnown RBP16.6■□□□□ 0.25
DDX54-204ENST00000546898 E5RJQ4 531 aa16.59■□□□□ 0.25
DDX54-204ENST00000546898 PENKP01210 267 aaPredicted RBP16.59■□□□□ 0.25
DDX54-204ENST00000546898 PTMSP20962 102 aa16.59■□□□□ 0.25
DDX54-204ENST00000546898 KRT9P35527 623 aa16.59■□□□□ 0.25
DDX54-204ENST00000546898 FNTBP49356 437 aa16.59■□□□□ 0.25
DDX54-204ENST00000546898 COPB1P53618 953 aaKnown RBP16.59■□□□□ 0.25
DDX54-204ENST00000546898 SEC13P55735 322 aa16.59■□□□□ 0.25
DDX54-204ENST00000546898 ZNF445P59923 1031 aa16.59■□□□□ 0.25
DDX54-204ENST00000546898 MESP2Q0VG99 397 aa16.59■□□□□ 0.25
DDX54-204ENST00000546898 NNTQ13423 1086 aa16.59■□□□□ 0.25
DDX54-204ENST00000546898 DMC1Q14565 340 aa16.59■□□□□ 0.25
DDX54-204ENST00000546898 CAVIN1Q6NZI2 390 aaKnown RBP16.59■□□□□ 0.25
DDX54-204ENST00000546898 SLC47A2Q86VL8 602 aa16.59■□□□□ 0.25
DDX54-204ENST00000546898 DENND1CQ8IV53 801 aa16.59■□□□□ 0.25
DDX54-204ENST00000546898 SCUBE3Q8IX30 993 aa16.59■□□□□ 0.25
DDX54-204ENST00000546898 KCNV2Q8TDN2 545 aa16.59■□□□□ 0.25
DDX54-204ENST00000546898 BPIFA3Q9BQP9 254 aa16.59■□□□□ 0.25
DDX54-204ENST00000546898 STK33Q9BYT3 514 aa16.59■□□□□ 0.25
DDX54-204ENST00000546898 DNAJC17Q9NVM6 304 aaKnown RBP16.59■□□□□ 0.25
DDX54-204ENST00000546898 SFMBT1Q9UHJ3 866 aa16.59■□□□□ 0.25
DDX54-204ENST00000546898 MMP17Q9ULZ9 603 aa16.59■□□□□ 0.25
DDX54-204ENST00000546898 CEP83Q9Y592 693 aa16.59■□□□□ 0.25
DDX54-204ENST00000546898 ZNF292O60281 2723 aa16.59■□□□□ 0.25
DDX54-204ENST00000546898 GPR179Q6PRD1 2367 aa16.58■□□□□ 0.25
DDX54-204ENST00000546898 TBC1D3BA6NDS4 549 aa16.58■□□□□ 0.24
DDX54-204ENST00000546898 PAPSS1O43252 624 aaPredicted RBP16.58■□□□□ 0.24
DDX54-204ENST00000546898 IGLV3-27P01718 113 aa16.58■□□□□ 0.24
DDX54-204ENST00000546898 CYBBP04839 570 aa16.58■□□□□ 0.24
DDX54-204ENST00000546898 PNMA6AP0CW24 399 aaPredicted RBP16.58■□□□□ 0.24
DDX54-204ENST00000546898 NCAM1P13591 858 aa16.58■□□□□ 0.24
DDX54-204ENST00000546898 ZNF18P17022 549 aa16.58■□□□□ 0.24
DDX54-204ENST00000546898 KIR2DL1P43626 348 aaPredicted RBP16.58■□□□□ 0.24
DDX54-204ENST00000546898 SNX16P57768 344 aa16.58■□□□□ 0.24
DDX54-204ENST00000546898 RING1Q06587 406 aa16.58■□□□□ 0.24
DDX54-204ENST00000546898 DMWDQ09019 674 aa16.58■□□□□ 0.24
DDX54-204ENST00000546898 NCAPHQ15003 741 aa16.58■□□□□ 0.24
DDX54-204ENST00000546898 C2orf27AQ580R0 203 aa16.58■□□□□ 0.24
DDX54-204ENST00000546898 NUGGCQ68CJ6 796 aa16.58■□□□□ 0.24
DDX54-204ENST00000546898 TRMT11Q7Z4G4 463 aaKnown RBP16.58■□□□□ 0.24
DDX54-204ENST00000546898 FAM149B1Q96BN6 582 aa16.58■□□□□ 0.24
DDX54-204ENST00000546898 SERPINB11Q96P15 392 aa16.58■□□□□ 0.24
DDX54-204ENST00000546898 IRX2Q9BZI1 471 aaPredicted RBP16.58■□□□□ 0.24
DDX54-204ENST00000546898 GANQ9H2C0 597 aa16.58■□□□□ 0.24
DDX54-204ENST00000546898 STOML2Q9UJZ1 356 aa16.58■□□□□ 0.24
DDX54-204ENST00000546898 SMG5Q9UPR3 1016 aaKnown RBP16.58■□□□□ 0.24
DDX54-204ENST00000546898 LGALS16A8MUM7 142 aa16.57■□□□□ 0.24
DDX54-204ENST00000546898 F8VZ95 297 aa16.57■□□□□ 0.24
DDX54-204ENST00000546898 CAPN9O14815 690 aa16.57■□□□□ 0.24
DDX54-204ENST00000546898 MSI1O43347 362 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms