RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 TRMT11Q7Z4G4 463 aaKnown RBP22.15■■□□□ 1.14
SCARB1-210ENST00000545493 KCNV2Q8TDN2 545 aa22.15■■□□□ 1.14
SCARB1-210ENST00000545493 HMGB4Q8WW32 186 aa22.15■■□□□ 1.14
SCARB1-210ENST00000545493 NT5C1BQ96P26 610 aa22.15■■□□□ 1.14
SCARB1-210ENST00000545493 ZSWIM1Q9BR11 485 aa22.15■■□□□ 1.14
SCARB1-210ENST00000545493 VPS45Q9NRW7 570 aa22.15■■□□□ 1.14
SCARB1-210ENST00000545493 PLK2Q9NYY3 685 aa22.15■■□□□ 1.14
SCARB1-210ENST00000545493 WDR35Q9P2L0 1181 aa22.15■■□□□ 1.14
SCARB1-210ENST00000545493 BCLAF3A2AJT9 711 aaKnown RBP22.14■■□□□ 1.13
SCARB1-210ENST00000545493 CISD3P0C7P0 127 aa22.14■■□□□ 1.13
SCARB1-210ENST00000545493 HOXB2P14652 356 aa22.14■■□□□ 1.13
SCARB1-210ENST00000545493 DGKGP49619 791 aa22.14■■□□□ 1.13
SCARB1-210ENST00000545493 STX17P56962 302 aa22.14■■□□□ 1.13
SCARB1-210ENST00000545493 FYB2Q5VWT5 728 aa22.14■■□□□ 1.13
SCARB1-210ENST00000545493 TMEM270Q6UE05 265 aa22.14■■□□□ 1.13
SCARB1-210ENST00000545493 ARHGEF19Q8IW93 802 aa22.14■■□□□ 1.13
SCARB1-210ENST00000545493 TRIM59Q8IWR1 403 aa22.14■■□□□ 1.13
SCARB1-210ENST00000545493 FRMD1Q8N878 549 aa22.14■■□□□ 1.13
SCARB1-210ENST00000545493 UBA3Q8TBC4 463 aa22.14■■□□□ 1.13
SCARB1-210ENST00000545493 RLN3Q8WXF3 142 aa22.14■■□□□ 1.13
SCARB1-210ENST00000545493 TFAP2BQ92481 460 aa22.14■■□□□ 1.13
SCARB1-210ENST00000545493 ACOX2Q99424 681 aa22.14■■□□□ 1.13
SCARB1-210ENST00000545493 CD248Q9HCU0 757 aa22.14■■□□□ 1.13
SCARB1-210ENST00000545493 MARCH2Q9P0N8 246 aa22.14■■□□□ 1.13
SCARB1-210ENST00000545493 BCCIPQ9P287 314 aaKnown RBP eCLIP22.14■■□□□ 1.13
SCARB1-210ENST00000545493 HESX1Q9UBX0 185 aa22.14■■□□□ 1.13
SCARB1-210ENST00000545493 MBD1Q9UIS9 605 aaPredicted RBP22.14■■□□□ 1.13
SCARB1-210ENST00000545493 A0A1W2PQF6 199 aa22.13■■□□□ 1.13
SCARB1-210ENST00000545493 BICDL2A1A5D9 508 aa22.13■■□□□ 1.13
SCARB1-210ENST00000545493 SETSIPP0DME0 302 aa22.13■■□□□ 1.13
SCARB1-210ENST00000545493 WASP42768 502 aa22.13■■□□□ 1.13
SCARB1-210ENST00000545493 COG7P83436 770 aa22.13■■□□□ 1.13
SCARB1-210ENST00000545493 PAK1Q13153 545 aa22.13■■□□□ 1.13
SCARB1-210ENST00000545493 MAP7D1Q3KQU3 841 aa22.13■■□□□ 1.13
SCARB1-210ENST00000545493 RSRC2Q7L4I2 434 aaKnown RBP22.13■■□□□ 1.13
SCARB1-210ENST00000545493 PPM1KQ8N3J5 372 aa22.13■■□□□ 1.13
SCARB1-210ENST00000545493 FBXO10Q9UK96 956 aa22.13■■□□□ 1.13
SCARB1-210ENST00000545493 AGO1Q9UL18 857 aaKnown RBP22.13■■□□□ 1.13
SCARB1-210ENST00000545493 CIZ1Q9ULV3 898 aaPredicted RBP22.13■■□□□ 1.13
SCARB1-210ENST00000545493 ZNF510Q9Y2H8 683 aa22.13■■□□□ 1.13
SCARB1-210ENST00000545493 SLC12A8A0AV02 714 aa22.12■■□□□ 1.13
SCARB1-210ENST00000545493 RNF225M0QZC1 329 aaPredicted RBP22.12■■□□□ 1.13
SCARB1-210ENST00000545493 P4HA2O15460 535 aa22.12■■□□□ 1.13
SCARB1-210ENST00000545493 CALCAP01258 141 aa22.12■■□□□ 1.13
SCARB1-210ENST00000545493 PAEPP09466 180 aa22.12■■□□□ 1.13
SCARB1-210ENST00000545493 GABRG2P18507 467 aa22.12■■□□□ 1.13
SCARB1-210ENST00000545493 NTSR1P30989 418 aa22.12■■□□□ 1.13
SCARB1-210ENST00000545493 ZNF132P52740 706 aa22.12■■□□□ 1.13
SCARB1-210ENST00000545493 MARSP56192 900 aaKnown RBP22.12■■□□□ 1.13
SCARB1-210ENST00000545493 LCLAT1Q6UWP7 414 aa22.12■■□□□ 1.13
SCARB1-210ENST00000545493 NUDT18Q6ZVK8 323 aa22.12■■□□□ 1.13
SCARB1-210ENST00000545493 KCTD13Q8WZ19 329 aa22.12■■□□□ 1.13
SCARB1-210ENST00000545493 PLD4Q96BZ4 506 aa22.12■■□□□ 1.13
SCARB1-210ENST00000545493 SPACA7Q96KW9 195 aa22.12■■□□□ 1.13
SCARB1-210ENST00000545493 GABRG3Q99928 467 aa22.12■■□□□ 1.13
SCARB1-210ENST00000545493 DCLK3Q9C098 648 aa22.12■■□□□ 1.13
SCARB1-210ENST00000545493 LRRC4Q9HBW1 653 aa22.12■■□□□ 1.13
SCARB1-210ENST00000545493 STRIP2Q9ULQ0 834 aa22.12■■□□□ 1.13
SCARB1-210ENST00000545493 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.12■■□□□ 1.13
SCARB1-210ENST00000545493 PCDHB4Q9Y5E5 795 aa22.12■■□□□ 1.13
SCARB1-210ENST00000545493 MUC22E2RYF6 1773 aaPredicted RBP22.12■■□□□ 1.13
SCARB1-210ENST00000545493 YJEFN3A6XGL0 299 aa22.11■■□□□ 1.13
SCARB1-210ENST00000545493 E7ENQ6 273 aa22.11■■□□□ 1.13
SCARB1-210ENST00000545493 CAVIN2O95810 425 aa22.11■■□□□ 1.13
SCARB1-210ENST00000545493 BRD2P25440 801 aaKnown RBP22.11■■□□□ 1.13
SCARB1-210ENST00000545493 DAOAP59103 153 aa22.11■■□□□ 1.13
SCARB1-210ENST00000545493 PPM1JQ5JR12 505 aa22.11■■□□□ 1.13
SCARB1-210ENST00000545493 KIAA1211LQ6NV74 962 aa22.11■■□□□ 1.13
SCARB1-210ENST00000545493 CYP2U1Q7Z449 544 aa22.11■■□□□ 1.13
SCARB1-210ENST00000545493 DENND1CQ8IV53 801 aa22.11■■□□□ 1.13
SCARB1-210ENST00000545493 FMNL3Q8IVF7 1028 aa22.11■■□□□ 1.13
SCARB1-210ENST00000545493 FAM217AQ8IXS0 508 aa22.11■■□□□ 1.13
SCARB1-210ENST00000545493 CHPFQ8IZ52 775 aa22.11■■□□□ 1.13
SCARB1-210ENST00000545493 SIX6OS1Q8N1H7 587 aa22.11■■□□□ 1.13
SCARB1-210ENST00000545493 RBBP8NLQ8NC74 664 aaPredicted RBP22.11■■□□□ 1.13
SCARB1-210ENST00000545493 EDEM2Q9BV94 578 aa22.11■■□□□ 1.13
SCARB1-210ENST00000545493 CALCOCO1Q9P1Z2 691 aa22.11■■□□□ 1.13
SCARB1-210ENST00000545493 RAD54BQ9Y620 910 aa22.11■■□□□ 1.13
SCARB1-210ENST00000545493 M0QYV0 167 aa22.1■■□□□ 1.13
SCARB1-210ENST00000545493 GABBR2O75899 941 aa22.1■■□□□ 1.13
SCARB1-210ENST00000545493 RGS7P49802 495 aa22.1■■□□□ 1.13
SCARB1-210ENST00000545493 MFAP3P55082 362 aa22.1■■□□□ 1.13
SCARB1-210ENST00000545493 GCNT1Q02742 428 aa22.1■■□□□ 1.13
SCARB1-210ENST00000545493 KCNH2Q12809 1159 aa22.1■■□□□ 1.13
SCARB1-210ENST00000545493 STPG1Q5TH74 334 aa22.1■■□□□ 1.13
SCARB1-210ENST00000545493 RRAGAQ7L523 313 aa22.1■■□□□ 1.13
SCARB1-210ENST00000545493 SCML4Q8N228 414 aa22.1■■□□□ 1.13
SCARB1-210ENST00000545493 CPXM2Q8N436 756 aa22.1■■□□□ 1.13
SCARB1-210ENST00000545493 EDEM1Q92611 657 aa22.1■■□□□ 1.13
SCARB1-210ENST00000545493 ERLEC1Q96DZ1 483 aa22.1■■□□□ 1.13
SCARB1-210ENST00000545493 KREMEN1Q96MU8 473 aa22.1■■□□□ 1.13
SCARB1-210ENST00000545493 IPO9Q96P70 1041 aaKnown RBP22.1■■□□□ 1.13
SCARB1-210ENST00000545493 CNGB3Q9NQW8 809 aa22.1■■□□□ 1.13
SCARB1-210ENST00000545493 CACNA2D2Q9NY47 1150 aa22.1■■□□□ 1.13
SCARB1-210ENST00000545493 KIAA1257Q9ULG3 409 aa22.1■■□□□ 1.13
SCARB1-210ENST00000545493 CLEC4EQ9ULY5 219 aa22.1■■□□□ 1.13
SCARB1-210ENST00000545493 SLC27A6Q9Y2P4 619 aa22.1■■□□□ 1.13
SCARB1-210ENST00000545493 LNP1A1A4G5 178 aa22.09■■□□□ 1.13
SCARB1-210ENST00000545493 PATE3B3GLJ2 98 aa22.09■■□□□ 1.13
SCARB1-210ENST00000545493 PIK3R2O00459 728 aa22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms