RNA–Protein interactions for RNA: ENST00000545459.5

LPCAT3-212, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-212ENST00000545459 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.87□□□□□ -1.79
LPCAT3-212ENST00000545459 SRPRBQ9Y5M8 271 aaKnown RBP3.87□□□□□ -1.79
LPCAT3-212ENST00000545459 CLIC4Q9Y696 253 aa3.87□□□□□ -1.79
LPCAT3-212ENST00000545459 PTPRJQ12913 1337 aa3.87□□□□□ -1.79
LPCAT3-212ENST00000545459 THADAQ6YHU6 1953 aa3.87□□□□□ -1.79
LPCAT3-212ENST00000545459 ABCA7Q8IZY2 2146 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 PTPRDP23468 1912 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 TCRBV21S2A2A0A5A6 115 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 E2F8A0AVK6 867 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 VPS37CA5D8V6 355 aaPredicted RBP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 TMEM8BA6NDV4 472 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 ZNF233A6NK53 670 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 F8VP50 259 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 SGK1O00141 431 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 KIAA0391O15091 583 aaKnown RBP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 ADAM23O75077 832 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 TACC1O75410 805 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 OAS1P00973 400 aaKnown RBP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 APODP05090 189 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 FAM163BP0C2L3 166 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 MBL2P11226 248 aaPredicted RBP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 ADH5P11766 374 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 ENGP17813 658 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 PTPN1P18031 435 aaKnown RBP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 CES1P23141 567 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 SOX18P35713 384 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 GNL1P36915 607 aaPredicted RBP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 EIF2DP41214 584 aaKnown RBP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 STAT6P42226 847 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 GRIA2P42262 883 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 DPP6P42658 865 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 PTGER3P43115 390 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 TNFRSF4P43489 277 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 KIR2DL1P43626 348 aaPredicted RBP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 CACNA2D1P54289 1103 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 CEBPZQ03701 1054 aaKnown RBP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 GAD2Q05329 585 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 KDSRQ06136 332 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 IFRD2Q12894 506 aaPredicted RBP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 TAF10Q12962 218 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 RESTQ13127 1097 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 BYSLQ13895 437 aaKnown RBP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 SURF1Q15526 300 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 DUOXA2Q1HG44 320 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 HSF5Q4G112 596 aaPredicted RBP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 MDH1BQ5I0G3 518 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 SPDYCQ5MJ68 293 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 EOGTQ5NDL2 527 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 TDRD10Q5VZ19 366 aaKnown RBP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 LYSMD4Q5XG99 296 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 SLC23A3Q6PIS1 610 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 CCDC73Q6ZRK6 1079 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 STXBP4Q6ZWJ1 553 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 ARMCX6Q7L4S7 300 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 HS2ST1Q7LGA3 356 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 TRAPPC11Q7Z392 1133 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 C12orf40Q86WS4 652 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 DDX42Q86XP3 938 aaKnown RBP eCLIP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 CBWD2Q8IUF1 395 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 SYT12Q8IV01 421 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 WDR49Q8IV35 697 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 SFTPA1Q8IWL2 248 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 CCDC65Q8IXS2 484 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 TMEFF1Q8IYR6 380 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 GLIS3Q8NEA6 775 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 DEFB124Q8NES8 71 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 OR13H1Q8NG92 308 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 OR6B3Q8NGW1 331 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 HMGB4Q8WW32 186 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 GATA6Q92908 595 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 SPACA7Q96KW9 195 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 SLITRK1Q96PX8 696 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 DUSP9Q99956 384 aaKnown RBP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 MRPL45Q9BRJ2 306 aaKnown RBP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 NUSAP1Q9BXS6 441 aaKnown RBP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 PANK2Q9BZ23 570 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 SNX25Q9H3E2 840 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 SLC32A1Q9H598 525 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 KIAA1586Q9HCI6 787 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 ZDHHC4Q9NPG8 344 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 ARHGEF4Q9NR80 690 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 TMEM74BQ9NUR3 256 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 TMEM30AQ9NV96 361 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 SMPD4Q9NXE4 827 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 HSPBP1Q9NZL4 362 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 TMEM63CQ9P1W3 806 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 BCCIPQ9P287 314 aaKnown RBP eCLIP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 CFAP97Q9P2B7 532 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 TBC1D14Q9P2M4 693 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 NXF1Q9UBU9 619 aaKnown RBP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 MBD1Q9UIS9 605 aaPredicted RBP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 FOXD3Q9UJU5 478 aaPredicted RBP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 PILRBQ9UKJ0 227 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 NME7Q9Y5B8 376 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 CPQQ9Y646 472 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 TNRC6BQ9UPQ9 1833 aaKnown RBP3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 CHD6Q8TD26 2715 aa3.86□□□□□ -1.79
LPCAT3-212ENST00000545459 A0A087X0B3 334 aa3.85□□□□□ -1.79
LPCAT3-212ENST00000545459 SPAARA0A1B0GVQ0 90 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms