RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 C19orf57Q0VDD7 668 aa17.09■□□□□ 0.33
DDX55-212ENST00000544738 EMC10Q5UCC4 262 aa17.09■□□□□ 0.33
DDX55-212ENST00000544738 SFTPA1Q8IWL2 248 aa17.09■□□□□ 0.33
DDX55-212ENST00000544738 ENGASEQ8NFI3 743 aa17.09■□□□□ 0.33
DDX55-212ENST00000544738 SPATA20Q8TB22 786 aa17.09■□□□□ 0.33
DDX55-212ENST00000544738 SMARCE1Q969G3 411 aa17.09■□□□□ 0.33
DDX55-212ENST00000544738 TIGD1Q96MW7 591 aa17.09■□□□□ 0.33
DDX55-212ENST00000544738 CCSER2Q9H7U1 834 aa17.09■□□□□ 0.33
DDX55-212ENST00000544738 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.09■□□□□ 0.339e-7■■■■■ 144.6
DDX55-212ENST00000544738 GMIPQ9P107 970 aa17.09■□□□□ 0.33
DDX55-212ENST00000544738 SH3BP1Q9Y3L3 701 aa17.09■□□□□ 0.33
DDX55-212ENST00000544738 ADAMTS9Q9P2N4 1935 aa17.08■□□□□ 0.33
DDX55-212ENST00000544738 AP5Z1O43299 807 aa17.08■□□□□ 0.32
DDX55-212ENST00000544738 PRB1P04280 392 aa17.08■□□□□ 0.32
DDX55-212ENST00000544738 CD58P19256 250 aa17.08■□□□□ 0.32
DDX55-212ENST00000544738 HOXD12P35452 270 aa17.08■□□□□ 0.32
DDX55-212ENST00000544738 MXI1P50539 228 aa17.08■□□□□ 0.32
DDX55-212ENST00000544738 RPL6Q02878 288 aaKnown RBP17.08■□□□□ 0.32
DDX55-212ENST00000544738 RHBDF2Q6PJF5 856 aa17.08■□□□□ 0.32
DDX55-212ENST00000544738 CLEC20AQ6ZU45 233 aa17.08■□□□□ 0.32
DDX55-212ENST00000544738 IL17RCQ8NAC3 791 aa17.08■□□□□ 0.32
DDX55-212ENST00000544738 EEF2KMTQ96G04 330 aa17.08■□□□□ 0.32
DDX55-212ENST00000544738 ZFRQ96KR1 1074 aaKnown RBP17.08■□□□□ 0.32
DDX55-212ENST00000544738 TWNKQ96RR1 684 aa17.08■□□□□ 0.32
DDX55-212ENST00000544738 PNKPQ96T60 521 aa17.08■□□□□ 0.32
DDX55-212ENST00000544738 CAPN10Q9HC96 672 aa17.08■□□□□ 0.32
DDX55-212ENST00000544738 ZDHHC4Q9NPG8 344 aa17.08■□□□□ 0.32
DDX55-212ENST00000544738 RAB20Q9NX57 234 aa17.08■□□□□ 0.32
DDX55-212ENST00000544738 SCML2Q9UQR0 700 aa17.08■□□□□ 0.32
DDX55-212ENST00000544738 PCDHA5Q9Y5H7 936 aa17.08■□□□□ 0.32
DDX55-212ENST00000544738 PALM2-AKAP2B1ALY0 433 aaPredicted RBP17.07■□□□□ 0.32
DDX55-212ENST00000544738 SLC16A3O15427 465 aaKnown RBP17.07■□□□□ 0.32
DDX55-212ENST00000544738 TLR5O60602 858 aa17.07■□□□□ 0.32
DDX55-212ENST00000544738 SYPP08247 313 aa17.07■□□□□ 0.32
DDX55-212ENST00000544738 ADH5P11766 374 aa17.07■□□□□ 0.32
DDX55-212ENST00000544738 SLC6A11P48066 632 aa17.07■□□□□ 0.32
DDX55-212ENST00000544738 GAD2Q05329 585 aa17.07■□□□□ 0.32
DDX55-212ENST00000544738 LRRC63Q05C16 580 aa17.07■□□□□ 0.32
DDX55-212ENST00000544738 GAB4Q2WGN9 574 aa17.07■□□□□ 0.32
DDX55-212ENST00000544738 PREPLQ4J6C6 727 aaPredicted RBP17.07■□□□□ 0.32
DDX55-212ENST00000544738 TCERG1LQ5VWI1 586 aa17.07■□□□□ 0.32
DDX55-212ENST00000544738 PEAR1Q5VY43 1037 aaPredicted RBP17.07■□□□□ 0.32
DDX55-212ENST00000544738 SCUBE2Q9NQ36 999 aa17.07■□□□□ 0.32
DDX55-212ENST00000544738 A0A0A0MRY4 1105 aa17.06■□□□□ 0.32
DDX55-212ENST00000544738 TCRBV21S2A2A0A5A6 115 aa17.06■□□□□ 0.32
DDX55-212ENST00000544738 HHLA1C9JL84 531 aa17.06■□□□□ 0.32
DDX55-212ENST00000544738 APODP05090 189 aa17.06■□□□□ 0.32
DDX55-212ENST00000544738 ACO1P21399 889 aaKnown RBP17.06■□□□□ 0.32
DDX55-212ENST00000544738 ATP5C1P36542 298 aaKnown RBP17.06■□□□□ 0.32
DDX55-212ENST00000544738 PPP1R2P41236 205 aa17.06■□□□□ 0.32
DDX55-212ENST00000544738 PSEN1P49768 467 aa17.06■□□□□ 0.32
DDX55-212ENST00000544738 ZNF33AQ06730 810 aa17.06■□□□□ 0.32
DDX55-212ENST00000544738 GOLGA8FQ08AF8 430 aa17.06■□□□□ 0.32
DDX55-212ENST00000544738 GOLGA8DPQ0D2H9 430 aa17.06■□□□□ 0.32
DDX55-212ENST00000544738 STIM1Q13586 685 aa17.06■□□□□ 0.32
DDX55-212ENST00000544738 EOGTQ5NDL2 527 aa17.06■□□□□ 0.32
DDX55-212ENST00000544738 LY6G5CQ5SRR4 150 aa17.06■□□□□ 0.32
DDX55-212ENST00000544738 BTBD8Q5XKL5 378 aa17.06■□□□□ 0.32
DDX55-212ENST00000544738 ANKRD40Q6AI12 368 aa17.06■□□□□ 0.32
DDX55-212ENST00000544738 RABEPKQ7Z6M1 372 aa17.06■□□□□ 0.32
DDX55-212ENST00000544738 ELOA2Q8IYF1 753 aaPredicted RBP17.06■□□□□ 0.32
DDX55-212ENST00000544738 SEMA4DQ92854 862 aa17.06■□□□□ 0.32
DDX55-212ENST00000544738 CRELD1Q96HD1 420 aa17.06■□□□□ 0.32
DDX55-212ENST00000544738 HEXIM2Q96MH2 286 aaKnown RBP17.06■□□□□ 0.32
DDX55-212ENST00000544738 DUSP16Q9BY84 665 aa17.06■□□□□ 0.32
DDX55-212ENST00000544738 CYLDQ9NQC7 956 aa17.06■□□□□ 0.32
DDX55-212ENST00000544738 DNAAF2Q9NVR5 837 aaKnown RBP17.06■□□□□ 0.32
DDX55-212ENST00000544738 APOBEC2Q9Y235 224 aaKnown RBP17.06■□□□□ 0.32
DDX55-212ENST00000544738 NAV2Q8IVL1 2488 aa17.06■□□□□ 0.32
DDX55-212ENST00000544738 MYH10P35580 1976 aa17.06■□□□□ 0.32
DDX55-212ENST00000544738 MYO16Q9Y6X6 1858 aa17.05■□□□□ 0.32
DDX55-212ENST00000544738 SCAMP3O14828 347 aaKnown RBP17.05■□□□□ 0.32
DDX55-212ENST00000544738 KAT7O95251 611 aa17.05■□□□□ 0.32
DDX55-212ENST00000544738 GRIA2P42262 883 aa17.05■□□□□ 0.32
DDX55-212ENST00000544738 KIF11P52732 1056 aa17.05■□□□□ 0.32
DDX55-212ENST00000544738 SLC14A1Q13336 389 aa17.05■□□□□ 0.32
DDX55-212ENST00000544738 HSF5Q4G112 596 aaPredicted RBP17.05■□□□□ 0.32
DDX55-212ENST00000544738 ZNF394Q53GI3 561 aa17.05■□□□□ 0.32
DDX55-212ENST00000544738 PPP1R26Q5T8A7 1209 aaPredicted RBP17.05■□□□□ 0.32
DDX55-212ENST00000544738 KLHDC10Q6PID8 442 aa17.05■□□□□ 0.32
DDX55-212ENST00000544738 NUDT18Q6ZVK8 323 aa17.05■□□□□ 0.32
DDX55-212ENST00000544738 HTR3DQ70Z44 454 aa17.05■□□□□ 0.32
DDX55-212ENST00000544738 GPRIN1Q7Z2K8 1008 aa17.05■□□□□ 0.32
DDX55-212ENST00000544738 TADA2BQ86TJ2 420 aa17.05■□□□□ 0.32
DDX55-212ENST00000544738 SLCO6A1Q86UG4 719 aa17.05■□□□□ 0.32
DDX55-212ENST00000544738 NAXDQ8IW45 347 aa17.05■□□□□ 0.32
DDX55-212ENST00000544738 ZC3H3Q8IXZ2 948 aaKnown RBP17.05■□□□□ 0.32
DDX55-212ENST00000544738 JAKMIP2Q96AA8 810 aa17.05■□□□□ 0.32
DDX55-212ENST00000544738 TMEM176AQ96HP8 235 aa17.05■□□□□ 0.32
DDX55-212ENST00000544738 CISHQ9NSE2 258 aa17.05■□□□□ 0.32
DDX55-212ENST00000544738 CACNA2D2Q9NY47 1150 aa17.05■□□□□ 0.32
DDX55-212ENST00000544738 ARMCX3Q9UH62 379 aaPredicted RBP17.05■□□□□ 0.32
DDX55-212ENST00000544738 COQ4Q9Y3A0 265 aa17.05■□□□□ 0.32
DDX55-212ENST00000544738 PSMA7O14818 248 aa17.04■□□□□ 0.32
DDX55-212ENST00000544738 CYP26A1O43174 497 aa17.04■□□□□ 0.32
DDX55-212ENST00000544738 HOXC11O43248 304 aaPredicted RBP17.04■□□□□ 0.32
DDX55-212ENST00000544738 TNFRSF4P43489 277 aa17.04■□□□□ 0.32
DDX55-212ENST00000544738 SLC8A3P57103 927 aa17.04■□□□□ 0.32
DDX55-212ENST00000544738 MESP2Q0VG99 397 aa17.04■□□□□ 0.32
DDX55-212ENST00000544738 PLEKHG6Q3KR16 790 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms