RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 NR2C2P49116 596 aa16.68■□□□□ 0.26
SCNN1A-221ENST00000543768 CCDC15Q0P6D6 951 aa16.68■□□□□ 0.26
SCNN1A-221ENST00000543768 KCNT2Q6UVM3 1135 aa16.68■□□□□ 0.26
SCNN1A-221ENST00000543768 STRADAQ7RTN6 431 aa16.68■□□□□ 0.26
SCNN1A-221ENST00000543768 TBC1D1Q86TI0 1168 aaPredicted RBP16.68■□□□□ 0.26
SCNN1A-221ENST00000543768 B3GALNT2Q8NCR0 500 aa16.68■□□□□ 0.26
SCNN1A-221ENST00000543768 MCUQ8NE86 351 aa16.68■□□□□ 0.26
SCNN1A-221ENST00000543768 NDRG1Q92597 394 aaKnown RBP16.68■□□□□ 0.26
SCNN1A-221ENST00000543768 CFAP36Q96G28 342 aa16.68■□□□□ 0.26
SCNN1A-221ENST00000543768 SERAC1Q96JX3 654 aa16.68■□□□□ 0.26
SCNN1A-221ENST00000543768 ZNF638Q14966 1978 aaKnown RBP16.68■□□□□ 0.26
SCNN1A-221ENST00000543768 XPO1O14980 1071 aaKnown RBP16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 HUS1O60921 280 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 CELF2O95319 508 aaKnown RBP16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 MT-ND3P03897 115 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 MATKP42679 507 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 MAGEA3P43357 314 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 PIGZQ86VD9 579 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 FAM228AQ86W67 206 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 PYROXD2Q8N2H3 581 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 CCDC33Q8N5R6 958 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 N4BP2L2Q92802 583 aaPredicted RBP16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 MIEF2Q96C03 454 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 TNIP3Q96KP6 325 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 MFHAS1Q9Y4C4 1052 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 PTGESO14684 152 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 HGSO14964 777 aaPredicted RBP16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 INHBAP08476 426 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 AMPD1P23109 780 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 WARSP23381 471 aaKnown RBP16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 CPT1AP50416 773 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 SLC18A2Q05940 514 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 EFHC1Q5JVL4 640 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 NCBP2-AS2Q69YL0 99 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 C4orf22Q6V702 233 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 ZNF534Q76KX8 674 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 OTOAQ7RTW8 1153 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 DEFB106AQ8N104 65 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 HNRNPABQ99729 332 aaKnown RBP16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 DUSP16Q9BY84 665 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 DTLQ9NZJ0 730 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 ZC3H7BQ9UGR2 993 aaKnown RBP16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 IKBKGQ9Y6K9 419 aa16.67■□□□□ 0.26
SCNN1A-221ENST00000543768 CXorf49A8MYA2 514 aaPredicted RBP16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 BEST1O76090 585 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 GOT1P17174 413 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 IGFBP6P24592 240 aaPredicted RBP16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 HOXC8P31273 242 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 KCNJ2P63252 427 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 ADIGQ0VDE8 80 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 SLC25A52Q3SY17 297 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 PAQR9Q6ZVX9 377 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 FAM131BQ86XD5 332 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 TOP6BLQ8N6T0 577 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 QKIQ96PU8 341 aaKnown RBP eCLIP16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 VPS11Q9H270 941 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 FZD10Q9ULW2 581 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 USH1CQ9Y6N9 552 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 C17orf102A2RUQ5 167 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 WDR91A4D1P6 747 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 CLDN5O00501 218 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 FAM155BO75949 473 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 TOMM70O94826 608 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 NQO1P15559 274 aaKnown RBP16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 PRKCHP24723 683 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 LRPAP1P30533 357 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 NEK3P51956 506 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 OTUD1Q5VV17 481 aaPredicted RBP16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 SLC26A11Q86WA9 606 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 VPS52Q8N1B4 723 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 C10orf82Q8WW14 230 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 LRRC39Q96DD0 335 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 SIGLEC10Q96LC7 697 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 CHKBQ9Y259 395 aa16.66■□□□□ 0.26
SCNN1A-221ENST00000543768 TRDMT1O14717 391 aaKnown RBP16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 LPXNO60711 386 aa16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 DGKIO75912 1065 aa16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 DHRS4L1P0CG22 281 aa16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 ALADP13716 330 aa16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 ETV4P43268 484 aa16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 PITX1P78337 314 aaPredicted RBP16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 SNCBQ16143 134 aa16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 SEPT7Q16181 437 aaKnown RBP16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 ASRGL1Q7L266 308 aa16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 BNIPLQ7Z465 357 aa16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 NME8Q8N427 588 aa16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 NT5C3BQ969T7 300 aa16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 OLFM3Q96PB7 478 aa16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 PPP1R10Q96QC0 940 aaKnown RBP16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 SMYD2Q9NRG4 433 aa16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 NR2E3Q9Y5X4 410 aa16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 CCDC189A1A4V9 331 aa16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 CCNB1P14635 433 aa16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 TPSB2P20231 275 aa16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 ACAT1P24752 427 aaKnown RBP16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 SULT1E1P49888 294 aa16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 TPSAB1Q15661 275 aa16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 TWF2Q6IBS0 349 aaKnown RBP16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 LRRC6Q86X45 466 aa16.65■□□□□ 0.26
SCNN1A-221ENST00000543768 PPM1NQ8N819 430 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms