RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 ALDH3A1P30838 453 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 STIP1P31948 543 aaKnown RBP6.3□□□□□ -1.4
XRCC4-206ENST00000542685 CCT6AP40227 531 aaKnown RBP6.3□□□□□ -1.4
XRCC4-206ENST00000542685 IARSP41252 1262 aaKnown RBP6.3□□□□□ -1.4
XRCC4-206ENST00000542685 CCNG1P51959 295 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 ZBED6P86452 979 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 WHAMMP3Q1A5X7 153 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 LACTB2Q53H82 288 aaPredicted RBP6.3□□□□□ -1.4
XRCC4-206ENST00000542685 GET4Q7L5D6 327 aaPredicted RBP6.3□□□□□ -1.4
XRCC4-206ENST00000542685 CATIPQ7Z7H3 387 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 CEP57Q86XR8 500 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 LRRC49Q8IUZ0 686 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 CCDC13Q8IYE1 715 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 CEP57L1Q8IYX8 460 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 ARHGAP18Q8N392 663 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 ATP11CQ8NB49 1132 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 CAGE1Q8TC20 777 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 FUBP1Q96AE4 644 aaKnown RBP6.3□□□□□ -1.4
XRCC4-206ENST00000542685 TBC1D31Q96DN5 1066 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 SMC6Q96SB8 1091 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 SH3GL2Q99962 352 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 TM6SF1Q9BZW5 370 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 LRRCC1Q9C099 1032 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 PUS7LQ9H0K6 701 aaKnown RBP6.3□□□□□ -1.4
XRCC4-206ENST00000542685 VCX3BQ9H321 246 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 KIAA1586Q9HCI6 787 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 VCX3AQ9NNX9 186 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 MKS1Q9NXB0 559 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 TRMT1Q9NXH9 659 aaKnown RBP6.3□□□□□ -1.4
XRCC4-206ENST00000542685 CNPY2Q9Y2B0 182 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 PCDHA13Q9Y5I0 950 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 COX11Q9Y6N1 276 aa6.3□□□□□ -1.4
XRCC4-206ENST00000542685 SETD1BQ9UPS6 1966 aaKnown RBP6.29□□□□□ -1.4
XRCC4-206ENST00000542685 GRIN2DO15399 1336 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 GPR75-ASB3A0A0A6YYF3 556 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 NDUFAB1O14561 156 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 NDUFS2O75306 463 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 ZFPL1O95159 310 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 MT-CO1P00395 513 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 GNAI3P08754 354 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 GSTA2P09210 222 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 TROVE2P10155 538 aaKnown RBP eCLIP6.29□□□□□ -1.4
XRCC4-206ENST00000542685 CYP11B2P19099 503 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 KIF5BP33176 963 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 NEK2P51955 445 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 VAV2P52735 878 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 CTXN1P60606 82 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 MRPS25P82663 173 aaKnown RBP6.29□□□□□ -1.4
XRCC4-206ENST00000542685 SNX1Q13596 522 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 ZNF169Q14929 603 aaPredicted RBP6.29□□□□□ -1.4
XRCC4-206ENST00000542685 GEN1Q17RS7 908 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 DACT2Q5SW24 774 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 MFSD4BQ5TF39 518 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 SYCE2Q6PIF2 218 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 SYNE3Q6ZMZ3 975 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 MIGA2Q7L4E1 593 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 COLGALT2Q8IYK4 626 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 DCBLD1Q8N8Z6 715 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 BOLLQ8N9W6 283 aaKnown RBP6.29□□□□□ -1.4
XRCC4-206ENST00000542685 C8orf58Q8NAV2 365 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 NLGN4YQ8NFZ3 816 aaPredicted RBP6.29□□□□□ -1.4
XRCC4-206ENST00000542685 RASSF8Q8NHQ8 419 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 JADE3Q92613 823 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 OPTNQ96CV9 577 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 ZSCAN31Q96LW9 406 aaPredicted RBP6.29□□□□□ -1.4
XRCC4-206ENST00000542685 GDAP1L1Q96MZ0 367 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 DUSP26Q9BV47 211 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 BRD8Q9H0E9 1235 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 ALDH8A1Q9H2A2 487 aaPredicted RBP6.29□□□□□ -1.4
XRCC4-206ENST00000542685 GOLPH3LQ9H4A5 285 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 DMAP1Q9NPF5 467 aaPredicted RBP6.29□□□□□ -1.4
XRCC4-206ENST00000542685 TDP1Q9NUW8 608 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 ZNHIT6Q9NWK9 470 aaKnown RBP6.29□□□□□ -1.4
XRCC4-206ENST00000542685 LRIT1Q9P2V4 623 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 MYO1AQ9UBC5 1043 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 TUBD1Q9UJT1 453 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 CDC23Q9UJX2 597 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 ASB3Q9Y575 518 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 SLIT1O75093 1534 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 JCADQ9P266 1359 aa6.29□□□□□ -1.4
XRCC4-206ENST00000542685 MRC1P22897 1456 aa6.28□□□□□ -1.4
XRCC4-206ENST00000542685 PTPRUQ92729 1446 aa6.28□□□□□ -1.4
XRCC4-206ENST00000542685 MYADML2A6NDP7 307 aa6.28□□□□□ -1.4
XRCC4-206ENST00000542685 LRRIQ3A6PVS8 624 aaPredicted RBP6.28□□□□□ -1.4
XRCC4-206ENST00000542685 E7ENQ6 273 aa6.28□□□□□ -1.4
XRCC4-206ENST00000542685 WDR46O15213 610 aaKnown RBP6.28□□□□□ -1.4
XRCC4-206ENST00000542685 HAUS5O94927 633 aa6.28□□□□□ -1.4
XRCC4-206ENST00000542685 SYF2O95926 243 aaKnown RBP6.28□□□□□ -1.4
XRCC4-206ENST00000542685 FCER1AP12319 257 aa6.28□□□□□ -1.4
XRCC4-206ENST00000542685 CD38P28907 300 aa6.28□□□□□ -1.4
XRCC4-206ENST00000542685 C21orf58P58505 322 aa6.28□□□□□ -1.4
XRCC4-206ENST00000542685 SIM1P81133 766 aaPredicted RBP6.28□□□□□ -1.4
XRCC4-206ENST00000542685 TARDBPQ13148 414 aaKnown RBP eCLIP6.28□□□□□ -1.4
XRCC4-206ENST00000542685 PABPC1LQ4VXU2 614 aaKnown RBP6.28□□□□□ -1.4
XRCC4-206ENST00000542685 THEMIS2Q5TEJ8 643 aa6.28□□□□□ -1.4
XRCC4-206ENST00000542685 C16orf87Q6PH81 154 aa6.28□□□□□ -1.4
XRCC4-206ENST00000542685 CCDC121Q6ZUS5 278 aa6.28□□□□□ -1.4
XRCC4-206ENST00000542685 LMNTD2Q8IXW0 634 aa6.28□□□□□ -1.4
XRCC4-206ENST00000542685 CBARPQ8N350 705 aaPredicted RBP6.28□□□□□ -1.4
XRCC4-206ENST00000542685 C1orf162Q8NEQ5 155 aaPredicted RBP6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms