RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 SLC15A5A6NIM6 579 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 KPNA7A9QM74 516 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 TRAFD1O14545 582 aaPredicted RBP6.78□□□□□ -1.32
PTPRO-208ENST00000542557 XPO1O14980 1071 aaKnown RBP6.78□□□□□ -1.32
PTPRO-208ENST00000542557 ZNF189O75820 626 aaPredicted RBP6.78□□□□□ -1.32
PTPRO-208ENST00000542557 KRT37O76014 449 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 APRTP07741 180 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 SNRPAP09012 282 aaKnown RBP6.78□□□□□ -1.32
PTPRO-208ENST00000542557 SMIM10L2AP0DMW4 78 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 SMIM10L2BP0DMW5 78 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 FOXD4Q12950 439 aaPredicted RBP6.78□□□□□ -1.32
PTPRO-208ENST00000542557 PPP6R3Q5H9R7 873 aaPredicted RBP6.78□□□□□ -1.32
PTPRO-208ENST00000542557 LGSNQ5TDP6 509 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 CYS1Q717R9 158 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 ZNF534Q76KX8 674 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 BZW1Q7L1Q6 419 aaKnown RBP6.78□□□□□ -1.32
PTPRO-208ENST00000542557 NLRP9Q7RTR0 991 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 RPAINQ86UA6 219 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 HACE1Q8IYU2 909 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 OLFM3Q96PB7 478 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 CSPG4P5Q96PW8 444 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 KCTD15Q96SI1 283 aaPredicted RBP6.78□□□□□ -1.32
PTPRO-208ENST00000542557 PARK7Q99497 189 aaKnown RBP6.78□□□□□ -1.32
PTPRO-208ENST00000542557 OSMRQ99650 979 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 B3GNT5Q9BYG0 378 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 TRIM6Q9C030 488 aaPredicted RBP6.78□□□□□ -1.32
PTPRO-208ENST00000542557 MANSC1Q9H8J5 431 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 PLAC1Q9HBJ0 212 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 ETNK1Q9HBU6 452 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 SAR1AQ9NR31 198 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 KLHL42Q9P2K6 505 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 GJD2Q9UKL4 321 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 SMIM28A0A1B0GU29 152 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 VGLL3A8MV65 326 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 ADCY6O43306 1168 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 DAB1O75553 588 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 APOEP02649 317 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 FAM163BP0C2L3 166 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 CYP2C9P11712 490 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 MLNP12872 115 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 CCDC130P13994 396 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 WARSP23381 471 aaKnown RBP6.78□□□□□ -1.32
PTPRO-208ENST00000542557 TAF6P49848 677 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 RASSF2P50749 326 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 ADAM17P78536 824 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 CDK16Q00536 496 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 GBE1Q04446 702 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 MTM1Q13496 603 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 PRKD1Q15139 912 aaPredicted RBP6.78□□□□□ -1.32
PTPRO-208ENST00000542557 SV2CQ496J9 727 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 EFHC1Q5JVL4 640 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 GLRA4Q5JXX5 417 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 NCBP2-AS2Q69YL0 99 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 PRPF39Q86UA1 669 aaKnown RBP6.78□□□□□ -1.32
PTPRO-208ENST00000542557 KIF2BQ8N4N8 673 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 CCDC110Q8TBZ0 833 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 CFAP36Q96G28 342 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 TNIP3Q96KP6 325 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 TRIM55Q9BYV6 548 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 ADAM33Q9BZ11 813 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 FAM49AQ9H0Q0 323 aaPredicted RBP6.78□□□□□ -1.32
PTPRO-208ENST00000542557 DHX35Q9H5Z1 703 aaKnown RBP6.78□□□□□ -1.32
PTPRO-208ENST00000542557 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.78□□□□□ -1.32
PTPRO-208ENST00000542557 LNPEPQ9UIQ6 1025 aa6.78□□□□□ -1.32
PTPRO-208ENST00000542557 RPL26L1Q9UNX3 145 aaKnown RBP6.78□□□□□ -1.32
PTPRO-208ENST00000542557 IQCA1LA6NCM1 817 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 FAM159BA6NKW6 160 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 GOLGA8RI6L899 631 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 COPEO14579 308 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 DNAJC6O75061 913 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 AVILO75366 819 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 DGKIO75912 1065 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 PIAS1O75925 651 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 PYGBP11216 843 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 TFE3P19532 575 aaPredicted RBP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 CCND1P24385 295 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 CNTFP26441 200 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 CALRP27797 417 aaKnown RBP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 GNL1P36915 607 aaPredicted RBP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 FDFT1P37268 417 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 MATKP42679 507 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 SERPINB9P50453 376 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 HEATR6Q6AI08 1181 aaKnown RBP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 UNC5AQ6ZN44 842 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 BNIPLQ7Z465 357 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 TRIM42Q8IWZ5 723 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 TOP6BLQ8N6T0 577 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 APPL2Q8NEU8 664 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 NPLOC4Q8TAT6 608 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 GSDMBQ8TAX9 411 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 CLEC4CQ8WTT0 213 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 SIGLEC10Q96LC7 697 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 KLF6Q99612 283 aaPredicted RBP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 EBNA1BP2Q99848 306 aaKnown RBP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 TSSK1BQ9BXA7 367 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 SNX25Q9H3E2 840 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 EBF2Q9HAK2 575 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 NPHS2Q9NP85 383 aa6.77□□□□□ -1.33
PTPRO-208ENST00000542557 EIF2B3Q9NR50 452 aaKnown RBP6.77□□□□□ -1.33
PTPRO-208ENST00000542557 DTLQ9NZJ0 730 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms