RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-223ENST00000542552 STK33Q9BYT3 514 aa16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 GANQ9H2C0 597 aa16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 WDR35Q9P2L0 1181 aa16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 AGO1Q9UL18 857 aaKnown RBP16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 HBS1LQ9Y450 684 aaKnown RBP16.16■□□□□ 0.18
ECHDC2-223ENST00000542552 PRR23AA6NEV1 266 aa16.15■□□□□ 0.18
ECHDC2-223ENST00000542552 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.15■□□□□ 0.18
ECHDC2-223ENST00000542552 PAPSS1O43252 624 aaPredicted RBP16.15■□□□□ 0.18
ECHDC2-223ENST00000542552 CACNG3O60359 315 aa16.15■□□□□ 0.18
ECHDC2-223ENST00000542552 TULP3O75386 442 aa16.15■□□□□ 0.18
ECHDC2-223ENST00000542552 KAT7O95251 611 aa16.15■□□□□ 0.18
ECHDC2-223ENST00000542552 HMBSP08397 361 aa16.15■□□□□ 0.18
ECHDC2-223ENST00000542552 BPIFB4P59827 614 aa16.15■□□□□ 0.18
ECHDC2-223ENST00000542552 PDCLQ13371 301 aa16.15■□□□□ 0.18
ECHDC2-223ENST00000542552 ANO6Q4KMQ2 910 aa16.15■□□□□ 0.18
ECHDC2-223ENST00000542552 ASCL5Q7RTU5 278 aa16.15■□□□□ 0.18
ECHDC2-223ENST00000542552 SFTPA1Q8IWL2 248 aa16.15■□□□□ 0.18
ECHDC2-223ENST00000542552 CCDC26Q8TAB7 109 aa16.15■□□□□ 0.18
ECHDC2-223ENST00000542552 USP33Q8TEY7 942 aa16.15■□□□□ 0.18
ECHDC2-223ENST00000542552 NKD2Q969F2 451 aaPredicted RBP16.15■□□□□ 0.18
ECHDC2-223ENST00000542552 FUCA2Q9BTY2 467 aa16.15■□□□□ 0.18
ECHDC2-223ENST00000542552 MIS12Q9H081 205 aa16.15■□□□□ 0.18
ECHDC2-223ENST00000542552 NAT10Q9H0A0 1025 aaKnown RBP16.15■□□□□ 0.18
ECHDC2-223ENST00000542552 ST7Q9NRC1 585 aa16.15■□□□□ 0.18
ECHDC2-223ENST00000542552 SFMBT1Q9UHJ3 866 aa16.15■□□□□ 0.18
ECHDC2-223ENST00000542552 SIK3Q9Y2K2 1263 aa16.15■□□□□ 0.18
ECHDC2-223ENST00000542552 ANTXRLA6NF34 631 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 LGALS16A8MUM7 142 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 E5RJQ4 531 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 SART1O43290 800 aaKnown RBP16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 IGLV3-27P01718 113 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 TPM2P07951 284 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 HOXC13P31276 330 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 GRIA2P42262 883 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 TNFRSF4P43489 277 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 KLK7P49862 253 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 DMWDQ09019 674 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 RAPGEF1Q13905 1077 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 ANO4Q32M45 955 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 SYT13Q7L8C5 426 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 AOPEPQ8N6M6 819 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 NAT16Q8N8M0 369 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 RPLP0P6Q8NHW5 317 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 ATRIPQ8WXE1 791 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 BBS2Q9BXC9 721 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 ARHGEF4Q9NR80 690 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 DEC1Q9P2X7 70 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 STOML2Q9UJZ1 356 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 FBXO10Q9UK96 956 aa16.14■□□□□ 0.17
ECHDC2-223ENST00000542552 F8VZ95 297 aa16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 GFRA2O00451 464 aa16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 GFRA3O60609 400 aa16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 PENKP01210 267 aaPredicted RBP16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 APODP05090 189 aa16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 TYRP14679 529 aa16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 KRT9P35527 623 aa16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 CHKAP35790 457 aa16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 KIR2DL1P43626 348 aaPredicted RBP16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 FKBP15Q5T1M5 1219 aa16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 TPGS1Q6ZTW0 290 aa16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 DENND1CQ8IV53 801 aa16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 PASD1Q8IV76 773 aa16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 DHX40Q8IX18 779 aaKnown RBP16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 CPXM2Q8N436 756 aa16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 SUMF1Q8NBK3 374 aa16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 ANKRD20A12PQ8NF67 263 aa16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 DDX1Q92499 740 aaKnown RBP16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 GOLGA1Q92805 767 aa16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 CPXM1Q96SM3 734 aa16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 POLR3BQ9NW08 1133 aaPredicted RBP16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 TJP2Q9UDY2 1190 aa16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 DAAM1Q9Y4D1 1078 aa16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 OTOGLQ3ZCN5 2332 aa16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 FAM186AA6NE01 2351 aa16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 GVINP1Q7Z2Y8 2422 aa16.13■□□□□ 0.17
ECHDC2-223ENST00000542552 GPR179Q6PRD1 2367 aa16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 NEDD8-MDP1E9PL57 170 aa16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 TRIM24O15164 1050 aa16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 EPHB6O15197 1021 aa16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 MSI1O43347 362 aaKnown RBP16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 LATS1O95835 1130 aa16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 CISD3P0C7P0 127 aa16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 NCAM1P13591 858 aa16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 ATP1A3P13637 1013 aa16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 CYP11B1P15538 503 aa16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 CDK11BP21127 795 aaKnown RBP16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 CDH5P33151 784 aaPredicted RBP16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 HARS2P49590 506 aaKnown RBP16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 JAM2P57087 298 aa16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 MRPS21P82921 87 aaKnown RBP16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 KDSRQ06136 332 aa16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 RING1Q06587 406 aa16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 PREPLQ4J6C6 727 aaPredicted RBP16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 FYB2Q5VWT5 728 aa16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 TERB1Q8NA31 727 aa16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 DQX1Q8TE96 717 aaKnown RBP16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 ACDQ96AP0 544 aa16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 PPP1R13BQ96KQ4 1090 aa16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 XPO6Q96QU8 1125 aaKnown RBP16.12■□□□□ 0.17
ECHDC2-223ENST00000542552 ERGIC2Q96RQ1 377 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms