RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 SOX5P35711 763 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 ACADSBP45954 432 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 BPIFB4P59827 614 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 SATB1Q01826 763 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 CSTF1Q05048 431 aaKnown RBP10.17□□□□□ -0.78
YBX3-212ENST00000542002 DMWDQ09019 674 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 GRSF1Q12849 480 aaKnown RBP eCLIP10.17□□□□□ -0.78
YBX3-212ENST00000542002 NR1H3Q13133 447 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 NFKBIBQ15653 356 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 SKOR2Q2VWA4 1001 aaPredicted RBP10.17□□□□□ -0.78
YBX3-212ENST00000542002 PTPN20Q4JDL3 420 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 C2CD6Q53TS8 623 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 DGKKQ5KSL6 1271 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 EMC10Q5UCC4 262 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 MSANTD2Q6P1R3 559 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 C1orf228Q6PIY5 440 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 TPGS1Q6ZTW0 290 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 FAM183BPQ6ZVS7 135 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 TADA2BQ86TJ2 420 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 NEK11Q8NG66 645 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 ADAM32Q8TC27 787 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 EPS8L1Q8TE68 723 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 RNF139Q8WU17 664 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 ATOH1Q92858 354 aaPredicted RBP10.17□□□□□ -0.78
YBX3-212ENST00000542002 OTUB2Q96DC9 234 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 CDK5RAP1Q96SZ6 601 aaKnown RBP10.17□□□□□ -0.78
YBX3-212ENST00000542002 PCDHB18PQ96TA0 734 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 ADAM33Q9BZ11 813 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 PLK2Q9NYY3 685 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 CALCOCO1Q9P1Z2 691 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 HCN2Q9UL51 889 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 CLEC4EQ9ULY5 219 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 F5P12259 2224 aa10.17□□□□□ -0.78
YBX3-212ENST00000542002 GOLGA6L7A0A1B0GV03 622 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 GFRA2O00451 464 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 HOXC11O43248 304 aaPredicted RBP10.16□□□□□ -0.78
YBX3-212ENST00000542002 RNF40O75150 1001 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 GRAP2O75791 330 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 ADH1CP00326 375 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 IGLV3-27P01718 113 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 TPM2P07951 284 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 CISD3P0C7P0 127 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 NCAM1P13591 858 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 PTMSP20962 102 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 DRD1P21728 446 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 PLA2G5P39877 138 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 MAGEA9P43362 315 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 YWHAZP63104 245 aaKnown RBP10.16□□□□□ -0.78
YBX3-212ENST00000542002 AMPD2Q01433 879 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 FMO1Q01740 532 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 GAD2Q05329 585 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 EIF4EBP2Q13542 120 aaPredicted RBP10.16□□□□□ -0.78
YBX3-212ENST00000542002 ANO4Q32M45 955 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 OLFML1Q6UWY5 402 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 FAM217AQ8IXS0 508 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 SPEM1Q8N4L4 309 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 ANKRD20A12PQ8NF67 263 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 OLIG1Q8TAK6 271 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 DQX1Q8TE96 717 aaKnown RBP10.16□□□□□ -0.78
YBX3-212ENST00000542002 CPA5Q8WXQ8 436 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 BAP1Q92560 729 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 NELL1Q92832 810 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 BHMTQ93088 406 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 MYEOVQ96EZ4 313 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 PCMTD1Q96MG8 357 aaPredicted RBP10.16□□□□□ -0.78
YBX3-212ENST00000542002 ZDHHC4Q9NPG8 344 aa10.16□□□□□ -0.78
YBX3-212ENST00000542002 PRMT8Q9NR22 394 aaPredicted RBP10.16□□□□□ -0.78
YBX3-212ENST00000542002 OLA1Q9NTK5 396 aaKnown RBP10.16□□□□□ -0.78
YBX3-212ENST00000542002 NEDD8-MDP1E9PL57 170 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 K7ESF4 209 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 LAMTOR5O43504 91 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 TULP3O75386 442 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 KAT7O95251 611 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 PENKP01210 267 aaPredicted RBP10.15□□□□□ -0.78
YBX3-212ENST00000542002 IGLV3-25P01717 112 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 CYP1A1P04798 512 aaPredicted RBP10.15□□□□□ -0.78
YBX3-212ENST00000542002 TYRP14679 529 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 TFE3P19532 575 aaPredicted RBP10.15□□□□□ -0.78
YBX3-212ENST00000542002 STAT1P42224 750 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 GABRB2P47870 512 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 CXCL12P48061 93 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 SGSHP51688 502 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 SEC13P55735 322 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 FANCCQ00597 558 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 ARID5AQ03989 594 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 KDSRQ06136 332 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 GOLGA8FQ08AF8 430 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 GOLGA8DPQ0D2H9 430 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 LRRC32Q14392 662 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 FYB2Q5VWT5 728 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 OR6B2Q6IFH4 312 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 TOGARAM2Q6ZUX3 1019 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 BEND5Q7L4P6 421 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 IRF2BP2Q7Z5L9 587 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 PHLDB2Q86SQ0 1253 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 TAC4Q86UU9 113 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 DEFB106AQ8N104 65 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 SYNPOQ8N3V7 929 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 SLC30A5Q8TAD4 765 aa10.15□□□□□ -0.78
YBX3-212ENST00000542002 FAM149B1Q96BN6 582 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms