RNA–Protein interactions for RNA: ENST00000541990.5

THBS3-211, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 2,928 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-211ENST00000541990 SPOCD1Q6ZMY3 1216 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 SH2D5Q6ZV89 423 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 RASSF3Q86WH2 238 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 PDSS2Q86YH6 399 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 KIAA0319LQ8IZA0 1049 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 PPTC7Q8NI37 304 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.47□□□□□ -0.89
THBS3-211ENST00000541990 TMEM40Q8WWA1 233 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 WNT8BQ93098 351 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 VTI1AQ96AJ9 217 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 MPP4Q96JB8 637 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 TRIM56Q9BRZ2 755 aaKnown RBP9.47□□□□□ -0.89
THBS3-211ENST00000541990 CENPKQ9BS16 269 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 MSTO1Q9BUK6 570 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 VTA1Q9NP79 307 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 STRIP2Q9ULQ0 834 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 GNEQ9Y223 722 aaKnown RBP9.47□□□□□ -0.89
THBS3-211ENST00000541990 COQ4Q9Y3A0 265 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 KIAA0100Q14667 2235 aaKnown RBP9.47□□□□□ -0.89
THBS3-211ENST00000541990 AVILO75366 819 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 AQP5P55064 265 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 KBTBD12Q3ZCT8 623 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 ZNF394Q53GI3 561 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 NET1Q7Z628 596 aaPredicted RBP9.47□□□□□ -0.89
THBS3-211ENST00000541990 TMPRSS6Q8IU80 811 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 C12orf56Q8IXR9 622 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 ATP11CQ8NB49 1132 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 APOPT1Q96IL0 206 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 FOXP3Q9BZS1 431 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 VCX3BQ9H321 246 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 IFT122Q9HBG6 1241 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 VCX3AQ9NNX9 186 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 SSU72Q9NP77 194 aaKnown RBP9.47□□□□□ -0.89
THBS3-211ENST00000541990 AGO2Q9UKV8 859 aaKnown RBP9.47□□□□□ -0.89
THBS3-211ENST00000541990 SHOC2Q9UQ13 582 aa9.47□□□□□ -0.89
THBS3-211ENST00000541990 hCG_1818297A0A087WSY0 165 aa9.46□□□□□ -0.89
THBS3-211ENST00000541990 A0A088AWK7 358 aa9.46□□□□□ -0.89
THBS3-211ENST00000541990 F8W8V4 182 aa9.46□□□□□ -0.89
THBS3-211ENST00000541990 ADCY3O60266 1144 aa9.46□□□□□ -0.89
THBS3-211ENST00000541990 UGT1A9O60656 530 aa9.46□□□□□ -0.89
THBS3-211ENST00000541990 PRKCBP05771 671 aa9.46□□□□□ -0.89
THBS3-211ENST00000541990 EPHB1P54762 984 aa9.46□□□□□ -0.89
THBS3-211ENST00000541990 AP2B1P63010 937 aa9.46□□□□□ -0.89
THBS3-211ENST00000541990 CACNB2Q08289 660 aaPredicted RBP9.46□□□□□ -0.89
THBS3-211ENST00000541990 BMPR2Q13873 1038 aa9.46□□□□□ -0.89
THBS3-211ENST00000541990 KCNT1Q5JUK3 1230 aa9.46□□□□□ -0.89
THBS3-211ENST00000541990 GLRA4Q5JXX5 417 aa9.46□□□□□ -0.89
THBS3-211ENST00000541990 ACAD11Q709F0 780 aa9.46□□□□□ -0.89
THBS3-211ENST00000541990 NAT8LQ8N9F0 302 aa9.46□□□□□ -0.89
THBS3-211ENST00000541990 PPP2R3CQ969Q6 453 aa9.46□□□□□ -0.89
THBS3-211ENST00000541990 MCEEQ96PE7 176 aa9.46□□□□□ -0.89
THBS3-211ENST00000541990 UGT1A7Q9HAW7 530 aa9.46□□□□□ -0.89
THBS3-211ENST00000541990 UGT1A10Q9HAW8 530 aa9.46□□□□□ -0.89
THBS3-211ENST00000541990 UGT1A8Q9HAW9 530 aa9.46□□□□□ -0.89
THBS3-211ENST00000541990 PACSIN3Q9UKS6 424 aa9.46□□□□□ -0.89
THBS3-211ENST00000541990 COMMD3-BMI1R4GMX3 469 aa9.46□□□□□ -0.89
THBS3-211ENST00000541990 GPR25O00155 361 aa9.46□□□□□ -0.9
THBS3-211ENST00000541990 TXNDC9O14530 226 aa9.46□□□□□ -0.9
THBS3-211ENST00000541990 ZSCAN9O15535 394 aaPredicted RBP9.46□□□□□ -0.9
THBS3-211ENST00000541990 HBP1O60381 514 aa9.46□□□□□ -0.9
THBS3-211ENST00000541990 MSCO60682 206 aa9.46□□□□□ -0.9
THBS3-211ENST00000541990 CIB2O75838 187 aa9.46□□□□□ -0.9
THBS3-211ENST00000541990 CST3P01034 146 aaPredicted RBP9.46□□□□□ -0.9
THBS3-211ENST00000541990 ITGA2BP08514 1039 aa9.46□□□□□ -0.9
THBS3-211ENST00000541990 PABPC4LP0CB38 370 aaKnown RBP9.46□□□□□ -0.9
THBS3-211ENST00000541990 SMIM18P0DKX4 95 aa9.46□□□□□ -0.9
THBS3-211ENST00000541990 SMIM10L2AP0DMW4 78 aa9.46□□□□□ -0.9
THBS3-211ENST00000541990 SMIM10L2BP0DMW5 78 aa9.46□□□□□ -0.9
THBS3-211ENST00000541990 IGFBP6P24592 240 aaPredicted RBP9.46□□□□□ -0.9
THBS3-211ENST00000541990 RPL22P35268 128 aaKnown RBP9.46□□□□□ -0.9
THBS3-211ENST00000541990 CPOXP36551 454 aa9.46□□□□□ -0.9
THBS3-211ENST00000541990 RGS2P41220 211 aa9.46□□□□□ -0.9
THBS3-211ENST00000541990 SREBF2Q12772 1141 aa9.46□□□□□ -0.9
THBS3-211ENST00000541990 GK3PQ14409 553 aa9.46□□□□□ -0.9
THBS3-211ENST00000541990 DGKDQ16760 1214 aa9.46□□□□□ -0.9
THBS3-211ENST00000541990 TRMT5Q32P41 509 aaKnown RBP9.46□□□□□ -0.9
THBS3-211ENST00000541990 ST13P4Q8IZP2 240 aaPredicted RBP9.46□□□□□ -0.9
THBS3-211ENST00000541990 HIC2Q96JB3 615 aa9.46□□□□□ -0.9
THBS3-211ENST00000541990 SRPK1Q96SB4 655 aaKnown RBP9.46□□□□□ -0.9
THBS3-211ENST00000541990 NTPCRQ9BSD7 190 aaKnown RBP9.46□□□□□ -0.9
THBS3-211ENST00000541990 CCDC106Q9BWC9 280 aa9.46□□□□□ -0.9
THBS3-211ENST00000541990 APOBEC3GQ9HC16 384 aaKnown RBP9.46□□□□□ -0.9
THBS3-211ENST00000541990 CREBZFQ9NS37 354 aa9.46□□□□□ -0.9
THBS3-211ENST00000541990 DDX18Q9NVP1 670 aaKnown RBP9.46□□□□□ -0.9
THBS3-211ENST00000541990 SLC4A7Q9Y6M7 1214 aa9.46□□□□□ -0.9
THBS3-211ENST00000541990 WDR81Q562E7 1941 aa9.46□□□□□ -0.9
THBS3-211ENST00000541990 TRIP12Q14669 1992 aaPredicted RBP9.46□□□□□ -0.9
THBS3-211ENST00000541990 KAT6AQ92794 2004 aa9.45□□□□□ -0.9
THBS3-211ENST00000541990 TCRBV9S1A1TA0A576 114 aa9.45□□□□□ -0.9
THBS3-211ENST00000541990 CXorf49A8MYA2 514 aaPredicted RBP9.45□□□□□ -0.9
THBS3-211ENST00000541990 KBTBD13C9JR72 458 aa9.45□□□□□ -0.9
THBS3-211ENST00000541990 SPECC1L-ADORA2AF8WAN1 911 aa9.45□□□□□ -0.9
THBS3-211ENST00000541990 TGDSO95455 350 aa9.45□□□□□ -0.9
THBS3-211ENST00000541990 ASLP04424 464 aa9.45□□□□□ -0.9
THBS3-211ENST00000541990 CD48P09326 243 aa9.45□□□□□ -0.9
THBS3-211ENST00000541990 CXCL8P10145 99 aa9.45□□□□□ -0.9
THBS3-211ENST00000541990 PRKAR2AP13861 404 aaKnown RBP9.45□□□□□ -0.9
THBS3-211ENST00000541990 STIP1P31948 543 aaKnown RBP9.45□□□□□ -0.9
THBS3-211ENST00000541990 ELK3P41970 407 aa9.45□□□□□ -0.9
THBS3-211ENST00000541990 TM4SF4P48230 202 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms