RNA–Protein interactions for RNA: ENST00000541770.1

CLSTN3-212, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-212ENST00000541770 MAPRE1Q15691 268 aaKnown RBP9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 ZNF423Q2M1K9 1284 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 SOWAHCQ53LP3 525 aaPredicted RBP9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 ENOSF1Q7L5Y1 443 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 PIP4P1Q86T03 277 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 RGL4Q8IZJ4 473 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 CRYBG2Q8N1P7 616 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 PNPLA1Q8N8W4 532 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 IL17RCQ8NAC3 791 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 OLIG1Q8TAK6 271 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 HNRNPLLQ8WVV9 542 aaKnown RBP9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 JAKMIP2Q96AA8 810 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 FUBP3Q96I24 572 aaKnown RBP eCLIP9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 TNIP3Q96KP6 325 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 MYRFLQ96LU7 910 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 CAMK1GQ96NX5 476 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 SYT15Q9BQS2 421 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 CRACR2AQ9BSW2 395 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 ANP32EQ9BTT0 268 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 DNAI2Q9GZS0 605 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 VPS16Q9H269 839 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 CCDC86Q9H6F5 360 aaKnown RBP9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.18□□□□□ -0.945e-14■■■■■ 211.5
CLSTN3-212ENST00000541770 ARHGEF4Q9NR80 690 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 SMPD4Q9NXE4 827 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 PILRBQ9UKJ0 227 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 ARHGAP26Q9UNA1 814 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 GPSM3Q9Y4H4 160 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 NME7Q9Y5B8 376 aa9.18□□□□□ -0.94
CLSTN3-212ENST00000541770 ATRXP46100 2492 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 ASPMQ8IZT6 3477 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 SPEGQ15772 3267 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 PES1O00541 588 aaKnown RBP9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 SYPP08247 313 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 PDGFRBP09619 1106 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 PTPN1P18031 435 aaKnown RBP9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 TRIM21P19474 475 aaKnown RBP9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 SLC9A1P19634 815 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 ANXA13P27216 316 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 GRIK1P39086 918 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 WASP42768 502 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 PDE6CP51160 858 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 NDST1P52848 882 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 CYP27A1Q02318 531 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 ZNF33AQ06730 810 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 KCNMA1Q12791 1236 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 LRMPQ12912 555 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 DHCR24Q15392 516 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 GAB4Q2WGN9 574 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 MAP7D1Q3KQU3 841 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 CFAP221Q4G0U5 840 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 FKBP15Q5T1M5 1219 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 C4orf50Q6ZRC1 276 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 RAB44Q7Z6P3 723 aaPredicted RBP9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 C12orf40Q86WS4 652 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 ARHGEF19Q8IW93 802 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 PPM1KQ8N3J5 372 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 UBR7Q8N806 425 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 NAT16Q8N8M0 369 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 B3GALNT2Q8NCR0 500 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 CEP76Q8TAP6 659 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 MYCBPAPQ8TBZ2 947 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 MDM1Q8TC05 714 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 ERGIC2Q96RQ1 377 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 ARID3AQ99856 593 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 NT5C1AQ9BXI3 368 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 ABCB6Q9NP58 842 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 PLCB1Q9NQ66 1216 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 CRTAC1Q9NQ79 661 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 CISHQ9NSE2 258 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 TRPM5Q9NZQ8 1165 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 APEX2Q9UBZ4 518 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 DAAM1Q9Y4D1 1078 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 CPQQ9Y646 472 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 PCNX2A6NKB5 2137 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 PCDH15Q96QU1 1955 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 PLXNB3Q9ULL4 1909 aa9.17□□□□□ -0.94
CLSTN3-212ENST00000541770 PTPRBP23467 1997 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 A0A1B0GTH6 734 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 TBC1D3BA6NDS4 549 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 ARHGAP33O14559 1287 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 SLC9A3R1O14745 358 aaPredicted RBP9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 ZBTB24O43167 697 aaPredicted RBP9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 SH3BP5O60239 455 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 ATP2C2O75185 946 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 SERPINF2P08697 491 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 FTH1P19P0C7X4 201 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 ADH5P11766 374 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 TCF3P15923 654 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 CD58P19256 250 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 BDNFP23560 247 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 MAGEA11P43364 429 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 MFAP3P55082 362 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 PSMC1P62191 440 aaKnown RBP9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 ZXDBP98169 803 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 MESP2Q0VG99 397 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 HNRNPDQ14103 355 aaKnown RBP9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 TRIP6Q15654 476 aaKnown RBP9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 PLEKHG6Q3KR16 790 aa9.16□□□□□ -0.94
CLSTN3-212ENST00000541770 FILIP1LQ4L180 1135 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms