RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 SCAMP5Q8TAC9 235 aa28.96■■■□□ 2.23
CCM2-218ENST00000541586 FAM172AQ8WUF8 416 aa28.96■■■□□ 2.23
CCM2-218ENST00000541586 SMG7Q92540 1137 aaKnown RBP28.96■■■□□ 2.23
CCM2-218ENST00000541586 ACSF2Q96CM8 615 aaPredicted RBP28.96■■■□□ 2.23
CCM2-218ENST00000541586 RBM41Q96IZ5 413 aaKnown RBP28.96■■■□□ 2.23
CCM2-218ENST00000541586 SPATA17Q96L03 361 aa28.96■■■□□ 2.23
CCM2-218ENST00000541586 LRRC1Q9BTT6 524 aa28.96■■■□□ 2.23
CCM2-218ENST00000541586 HCFC1R1Q9NWW0 138 aa28.96■■■□□ 2.23
CCM2-218ENST00000541586 TCRBV7S2A1N4TA0A589 114 aa28.95■■■□□ 2.23
CCM2-218ENST00000541586 SLC38A8A6NNN8 435 aa28.95■■■□□ 2.23
CCM2-218ENST00000541586 PI4K2BG5E9Z4 385 aa28.95■■■□□ 2.23
CCM2-218ENST00000541586 DAB1O75553 588 aa28.95■■■□□ 2.23
CCM2-218ENST00000541586 TRUB2O95900 331 aaKnown RBP28.95■■■□□ 2.23
CCM2-218ENST00000541586 DESP17661 470 aa28.95■■■□□ 2.23
CCM2-218ENST00000541586 TFE3P19532 575 aaPredicted RBP28.95■■■□□ 2.23
CCM2-218ENST00000541586 KCNA5P22460 613 aa28.95■■■□□ 2.23
CCM2-218ENST00000541586 HOXA9P31269 272 aa28.95■■■□□ 2.23
CCM2-218ENST00000541586 MATKP42679 507 aa28.95■■■□□ 2.23
CCM2-218ENST00000541586 SLC5A3P53794 718 aa28.95■■■□□ 2.23
CCM2-218ENST00000541586 SMTNL2Q2TAL5 461 aa28.95■■■□□ 2.23
CCM2-218ENST00000541586 KLHL7Q8IXQ5 586 aa28.95■■■□□ 2.23
CCM2-218ENST00000541586 DEFB106AQ8N104 65 aa28.95■■■□□ 2.23
CCM2-218ENST00000541586 ANKRD7Q92527 254 aa28.95■■■□□ 2.23
CCM2-218ENST00000541586 RNF25Q96BH1 459 aaPredicted RBP28.95■■■□□ 2.23
CCM2-218ENST00000541586 CORO1BQ9BR76 489 aa28.95■■■□□ 2.23
CCM2-218ENST00000541586 CDH22Q9UJ99 828 aa28.95■■■□□ 2.23
CCM2-218ENST00000541586 SART1O43290 800 aaKnown RBP28.94■■■□□ 2.22
CCM2-218ENST00000541586 COL19A1Q14993 1142 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 KCNT1Q5JUK3 1230 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 HFE2Q6ZVN8 426 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 GRASPQ7Z6J2 395 aaPredicted RBP28.94■■■□□ 2.22
CCM2-218ENST00000541586 ITIH5Q86UX2 942 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 ZDHHC14Q8IZN3 488 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 RAPGEF5Q92565 580 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 CENPIQ92674 756 aaPredicted RBP28.94■■■□□ 2.22
CCM2-218ENST00000541586 PSMG2Q969U7 264 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 ZNF707Q96C28 371 aaPredicted RBP28.94■■■□□ 2.22
CCM2-218ENST00000541586 SLITRK1Q96PX8 696 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 PEBP4Q96S96 227 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 PARD6BQ9BYG5 372 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 ADAM33Q9BZ11 813 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 UBE2ZQ9H832 354 aaPredicted RBP28.94■■■□□ 2.22
CCM2-218ENST00000541586 COL6A3P12111 3177 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 GOLGA6L10A0A0M3HER8 536 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 YJEFN3A6XGL0 299 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 E7ENQ6 273 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 CSH1P0DML2 217 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 CSH2P0DML3 217 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 USP46P62068 366 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 PM20D1Q6GTS8 502 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 ANKS1BQ7Z6G8 1248 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 HS6ST3Q8IZP7 471 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 HLA-CQ95604 372 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 SLC2A13Q96QE2 648 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 PNKPQ96T60 521 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 HERPUD2Q9BSE4 406 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 POPDC2Q9HBU9 364 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 DNMT3BQ9UBC3 853 aaKnown RBP28.94■■■□□ 2.22
CCM2-218ENST00000541586 ASB3Q9Y575 518 aa28.94■■■□□ 2.22
CCM2-218ENST00000541586 PATJQ8NI35 1801 aa28.93■■■□□ 2.22
CCM2-218ENST00000541586 RALAP11233 206 aa28.93■■■□□ 2.22
CCM2-218ENST00000541586 PTPN2P17706 415 aa28.93■■■□□ 2.22
CCM2-218ENST00000541586 HDAC4P56524 1084 aa28.93■■■□□ 2.22
CCM2-218ENST00000541586 MRPS25P82663 173 aaKnown RBP28.93■■■□□ 2.22
CCM2-218ENST00000541586 CCDC70Q6NSX1 233 aa28.93■■■□□ 2.22
CCM2-218ENST00000541586 CES5AQ6NT32 575 aa28.93■■■□□ 2.22
CCM2-218ENST00000541586 C8orf74Q6P047 294 aa28.93■■■□□ 2.22
CCM2-218ENST00000541586 MFSD7Q6UXD7 560 aa28.93■■■□□ 2.22
CCM2-218ENST00000541586 CYP4V2Q6ZWL3 525 aaPredicted RBP28.93■■■□□ 2.22
CCM2-218ENST00000541586 BHLHA9Q7RTU4 235 aa28.93■■■□□ 2.22
CCM2-218ENST00000541586 DDX47Q9H0S4 455 aaKnown RBP28.93■■■□□ 2.22
CCM2-218ENST00000541586 USP3Q9Y6I4 520 aa28.93■■■□□ 2.22
CCM2-218ENST00000541586 TNFRSF10BO14763 440 aa28.92■■■□□ 2.22
CCM2-218ENST00000541586 PRPSAP2O60256 369 aa28.92■■■□□ 2.22
CCM2-218ENST00000541586 NOS2P35228 1153 aa28.92■■■□□ 2.22
CCM2-218ENST00000541586 SIX1Q15475 284 aaPredicted RBP28.92■■■□□ 2.22
CCM2-218ENST00000541586 DCAF6Q58WW2 860 aa28.92■■■□□ 2.22
CCM2-218ENST00000541586 ODF2Q5BJF6 829 aa28.92■■■□□ 2.22
CCM2-218ENST00000541586 SCML4Q8N228 414 aa28.92■■■□□ 2.22
CCM2-218ENST00000541586 MSLNLQ96KJ4 702 aa28.92■■■□□ 2.22
CCM2-218ENST00000541586 NCAPGQ9BPX3 1015 aa28.92■■■□□ 2.22
CCM2-218ENST00000541586 HEMGNQ9BXL5 484 aa28.92■■■□□ 2.22
CCM2-218ENST00000541586 OSBPL8Q9BZF1 889 aa28.92■■■□□ 2.22
CCM2-218ENST00000541586 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP28.91■■■□□ 2.22
CCM2-218ENST00000541586 LRRD1A4D1F6 860 aa28.91■■■□□ 2.22
CCM2-218ENST00000541586 FYNP06241 537 aa28.91■■■□□ 2.22
CCM2-218ENST00000541586 RARAP10276 462 aa28.91■■■□□ 2.22
CCM2-218ENST00000541586 HMGA1P17096 107 aaKnown RBP28.91■■■□□ 2.22
CCM2-218ENST00000541586 CETN2P41208 172 aa28.91■■■□□ 2.22
CCM2-218ENST00000541586 NTHL1P78549 312 aa28.91■■■□□ 2.22
CCM2-218ENST00000541586 SLC25A52Q3SY17 297 aa28.91■■■□□ 2.22
CCM2-218ENST00000541586 GLE1Q53GS7 698 aaKnown RBP28.91■■■□□ 2.22
CCM2-218ENST00000541586 PRELID2Q8N945 189 aa28.91■■■□□ 2.22
CCM2-218ENST00000541586 CMASQ8NFW8 434 aaPredicted RBP28.91■■■□□ 2.22
CCM2-218ENST00000541586 IRGQQ8WZA9 623 aa28.91■■■□□ 2.22
CCM2-218ENST00000541586 TBCBQ99426 244 aa28.91■■■□□ 2.22
CCM2-218ENST00000541586 S1PR5Q9H228 398 aa28.91■■■□□ 2.22
CCM2-218ENST00000541586 ADAM7Q9H2U9 754 aa28.91■■■□□ 2.22
CCM2-218ENST00000541586 BRWD1Q9NSI6 2320 aa28.91■■■□□ 2.22
CCM2-218ENST00000541586 TARSL2A2RTX5 802 aaKnown RBP28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms