RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 TRMT5Q32P41 509 aaKnown RBP15.76■□□□□ 0.11
HMGA2-210ENST00000541363 OTUD3Q5T2D3 398 aaPredicted RBP15.76■□□□□ 0.11
HMGA2-210ENST00000541363 OR52L1Q8NGH7 329 aa15.76■□□□□ 0.11
HMGA2-210ENST00000541363 STARD8Q92502 1023 aa15.76■□□□□ 0.11
HMGA2-210ENST00000541363 ZIM3Q96PE6 472 aa15.76■□□□□ 0.11
HMGA2-210ENST00000541363 ACOX2Q99424 681 aa15.76■□□□□ 0.11
HMGA2-210ENST00000541363 MCUBQ9NWR8 336 aa15.76■□□□□ 0.11
HMGA2-210ENST00000541363 LIN7AO14910 233 aaPredicted RBP15.76■□□□□ 0.11
HMGA2-210ENST00000541363 TKTP29401 623 aaKnown RBP15.76■□□□□ 0.11
HMGA2-210ENST00000541363 BRINP3Q76B58 766 aa15.76■□□□□ 0.11
HMGA2-210ENST00000541363 LEMD2Q8NC56 503 aa15.76■□□□□ 0.11
HMGA2-210ENST00000541363 MASTLQ96GX5 879 aa15.76■□□□□ 0.11
HMGA2-210ENST00000541363 C9orf16Q9BUW7 83 aa15.76■□□□□ 0.11
HMGA2-210ENST00000541363 GANQ9H2C0 597 aa15.76■□□□□ 0.11
HMGA2-210ENST00000541363 NCKIPSDQ9NZQ3 722 aa15.76■□□□□ 0.11
HMGA2-210ENST00000541363 NPHP3-ACAD11A0A0J9YXS1 232 aa15.76■□□□□ 0.11
HMGA2-210ENST00000541363 MAGEB2O15479 319 aa15.76■□□□□ 0.11
HMGA2-210ENST00000541363 TEX33O43247 280 aa15.76■□□□□ 0.11
HMGA2-210ENST00000541363 APOC1P02654 83 aa15.76■□□□□ 0.11
HMGA2-210ENST00000541363 BST2Q10589 180 aaKnown RBP15.76■□□□□ 0.11
HMGA2-210ENST00000541363 TAF5Q15542 800 aa15.76■□□□□ 0.11
HMGA2-210ENST00000541363 SWI5Q1ZZU3 235 aa15.76■□□□□ 0.11
HMGA2-210ENST00000541363 SIX5Q8N196 739 aa15.76■□□□□ 0.11
HMGA2-210ENST00000541363 LRRC17Q8N6Y2 441 aa15.76■□□□□ 0.11
HMGA2-210ENST00000541363 AFF2P51816 1311 aa15.76■□□□□ 0.11
HMGA2-210ENST00000541363 PTGES3LE9PB15 166 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 AHCYL1O43865 530 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 CCR4P51679 360 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 HPS6Q86YV9 775 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 UBA3Q8TBC4 463 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 BHLHE41Q9C0J9 482 aaPredicted RBP15.75■□□□□ 0.11
HMGA2-210ENST00000541363 CCDC59Q9P031 241 aaKnown RBP15.75■□□□□ 0.11
HMGA2-210ENST00000541363 KCNQ3O43525 872 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 GLP2RO95838 553 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 COILP38432 576 aaPredicted RBP15.75■□□□□ 0.11
HMGA2-210ENST00000541363 RIPOR1Q6ZS17 1223 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 HERC6Q8IVU3 1022 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 CARNMT1Q8N4J0 409 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 EPHB2P29323 1055 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 CORO7P57737 925 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 ACTRT2Q8TDY3 377 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 FAM118BQ9BPY3 351 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 PTPN3P26045 913 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 ARL3P36405 182 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 GPAT2Q6NUI2 795 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 ZFP1Q6P2D0 407 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 OLFML1Q6UWY5 402 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 FAM196AQ6ZSG2 479 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 CLVS1Q8IUQ0 354 aaPredicted RBP15.75■□□□□ 0.11
HMGA2-210ENST00000541363 SPACA7Q96KW9 195 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 CNOT7Q9UIV1 285 aaKnown RBP15.75■□□□□ 0.11
HMGA2-210ENST00000541363 COMTP21964 271 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 GLRBP48167 497 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 PYHIN1Q6K0P9 492 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 STRA8Q7Z7C7 330 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 CCDC177Q9NQR7 707 aaPredicted RBP15.75■□□□□ 0.11
HMGA2-210ENST00000541363 LYVE1Q9Y5Y7 322 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 INPP4BO15327 924 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 DGAT1O75907 488 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 RBP3P10745 1247 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 PNPLA4P41247 253 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 KYQ8NBH2 561 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 SLC4A9Q96Q91 983 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 ACTR8Q9H981 624 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 ABI2Q9NYB9 513 aaPredicted RBP15.75■□□□□ 0.11
HMGA2-210ENST00000541363 IRAK3Q9Y616 596 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 ERBB3P21860 1342 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 TRIM3O75382 744 aaPredicted RBP15.75■□□□□ 0.11
HMGA2-210ENST00000541363 EGFRP00533 1210 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 ATP2C1P98194 919 aaPredicted RBP15.75■□□□□ 0.11
HMGA2-210ENST00000541363 CRELD1Q96HD1 420 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 ORAI2Q96SN7 254 aa15.75■□□□□ 0.11
HMGA2-210ENST00000541363 RBM12Q9NTZ6 932 aaKnown RBP15.75■□□□□ 0.11
HMGA2-210ENST00000541363 KMOO15229 486 aa15.74■□□□□ 0.11
HMGA2-210ENST00000541363 LDLRP01130 860 aa15.74■□□□□ 0.11
HMGA2-210ENST00000541363 CACNA2D1P54289 1103 aa15.74■□□□□ 0.11
HMGA2-210ENST00000541363 BHMTQ93088 406 aa15.74■□□□□ 0.11
HMGA2-210ENST00000541363 DDX18Q9NVP1 670 aaKnown RBP15.74■□□□□ 0.11
HMGA2-210ENST00000541363 FAM50BQ9Y247 325 aa15.74■□□□□ 0.11
HMGA2-210ENST00000541363 WDR19Q8NEZ3 1342 aa15.74■□□□□ 0.11
HMGA2-210ENST00000541363 LOC100506127A0A0U1RQW1 187 aa15.74■□□□□ 0.11
HMGA2-210ENST00000541363 SSU72P8A0A1W2PR75 194 aa15.74■□□□□ 0.11
HMGA2-210ENST00000541363 PRMT3O60678 531 aa15.74■□□□□ 0.11
HMGA2-210ENST00000541363 FGFR1P11362 822 aa15.74■□□□□ 0.11
HMGA2-210ENST00000541363 SCTRP47872 440 aa15.74■□□□□ 0.11
HMGA2-210ENST00000541363 SNRPFP62306 86 aaKnown RBP15.74■□□□□ 0.11
HMGA2-210ENST00000541363 MKRN4PQ13434 485 aaPredicted RBP15.74■□□□□ 0.11
HMGA2-210ENST00000541363 TOP3AQ13472 1001 aaPredicted RBP15.74■□□□□ 0.11
HMGA2-210ENST00000541363 ZSCAN2Q7Z7L9 614 aaPredicted RBP15.74■□□□□ 0.11
HMGA2-210ENST00000541363 UNC5CLQ8IV45 518 aa15.74■□□□□ 0.11
HMGA2-210ENST00000541363 MYLPFQ96A32 169 aa15.74■□□□□ 0.11
HMGA2-210ENST00000541363 TMEM8AQ9HCN3 771 aa15.74■□□□□ 0.11
HMGA2-210ENST00000541363 AKAP7Q9P0M2 348 aaPredicted RBP15.74■□□□□ 0.11
HMGA2-210ENST00000541363 LIMD1Q9UGP4 676 aa15.74■□□□□ 0.11
HMGA2-210ENST00000541363 PCDHB2Q9Y5E7 798 aa15.74■□□□□ 0.11
HMGA2-210ENST00000541363 SKIV2L2P42285 1042 aaKnown RBP15.74■□□□□ 0.11
HMGA2-210ENST00000541363 ALDH7A1P49419 539 aaKnown RBP15.74■□□□□ 0.11
HMGA2-210ENST00000541363 CLK2P49760 499 aaKnown RBP15.74■□□□□ 0.11
HMGA2-210ENST00000541363 RPS6KA3P51812 740 aa15.74■□□□□ 0.11
HMGA2-210ENST00000541363 LRRC6Q86X45 466 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms