RNA–Protein interactions for RNA: ENST00000541157.5

MRE11-210, Transcript of MRE11 homolog, double strand break repair nuclease, human

TSL 4

Gene MRE11, Length 594 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRE11-210	ENST00000541157	DYNC1I1	O14576	645 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	ABLIM3	O94929	683 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	RTN3	O95197	1032 aa	Predicted RBP	10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	RARA	P10276	462 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	RALA	P11233	206 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	VARS	P26640	1264 aa	Known RBP	10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	RDX	P35241	583 aa	Known RBP	10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	CETN2	P41208	172 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	CDKN2B	P42772	138 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	YWHAG	P61981	247 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	DUSP4	Q13115	394 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	RAB33A	Q14088	237 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	SMC1A	Q14683	1233 aa	Known RBP	10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	SIX1	Q15475	284 aa	Predicted RBP	10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	PPP2R5E	Q16537	467 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	TAZ	Q16635	292 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	SMTNL2	Q2TAL5	461 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	MGAT5B	Q3V5L5	792 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	BOLA3	Q53S33	107 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	SDHAF4	Q5VUM1	108 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	BSPRY	Q5W0U4	402 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	MFSD7	Q6UXD7	560 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	ANKS1B	Q7Z6G8	1248 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	SCD5	Q86SK9	330 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	BPHL	Q86WA6	291 aa	Predicted RBP	10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	GPR161	Q8N6U8	529 aa	Known RBP	10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	ZNF461	Q8TAF7	563 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	MAIP1	Q8WWC4	291 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	SEPT5	Q99719	369 aa	Predicted RBP	10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	HERPUD2	Q9BSE4	406 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	OSBPL8	Q9BZF1	889 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	ZBP1	Q9H171	429 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	FBXO44	Q9H4M3	255 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	SLITRK6	Q9H5Y7	841 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	APOBEC3C	Q9NRW3	190 aa	Known RBP eCLIP	10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	MRPL17	Q9NRX2	175 aa	Known RBP	10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	COMMD8	Q9NX08	183 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	FNIP2	Q9P278	1114 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	MTUS1	Q9ULD2	1270 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	MAFF	Q9ULX9	164 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	NAALADL1	Q9UQQ1	740 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	SCML2	Q9UQR0	700 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	NR2E1	Q9Y466	385 aa		10.43	□□□□□ -0.74
MRE11-210	ENST00000541157	PLXNA3	P51805	1871 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	hCG_1818297	A0A087WSY0	165 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	TARSL2	A2RTX5	802 aa	Known RBP	10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	CAPN9	O14815	690 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	MDM4	O15151	490 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	PHF2	O75151	1096 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	SOAT2	O75908	522 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	RHOXF2B	P0C7M4	288 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	CTSA	P10619	480 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	NCAM1	P13591	858 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	ATF6	P18850	670 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	KDELR1	P24390	212 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	BMPR1A	P36894	532 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	TUFM	P49411	452 aa	Known RBP	10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	ARSE	P51690	589 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	PITX1	P78337	314 aa	Predicted RBP	10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	IFRD2	Q12894	506 aa	Predicted RBP	10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	KLF1	Q13351	362 aa	Predicted RBP	10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	CYP1B1	Q16678	543 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	GLE1	Q53GS7	698 aa	Known RBP	10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	ODF2	Q5BJF6	829 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	C4orf48	Q5BLP8	95 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	TFDP3	Q5H9I0	405 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	KCNT1	Q5JUK3	1230 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	ZFYVE27	Q5T4F4	411 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	CCDC70	Q6NSX1	233 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	C8orf74	Q6P047	294 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	SCYL2	Q6P3W7	929 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	ADAT2	Q7Z6V5	191 aa	Known RBP	10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	VSIG1	Q86XK7	387 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	PSTK	Q8IV42	348 aa	Known RBP	10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	ZDHHC14	Q8IZN3	488 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	ARHGAP18	Q8N392	663 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	PRELID2	Q8N945	189 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	C12orf50	Q8NA57	414 aa	Predicted RBP	10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	KLHL23	Q8NBE8	558 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	KCTD6	Q8NC69	237 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	SLC7A14	Q8TBB6	771 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	HSPH1	Q92598	858 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	EDEM1	Q92611	657 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	PGAP3	Q96FM1	320 aa	Predicted RBP	10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	KRT12	Q99456	494 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	RHOXF2	Q9BQY4	288 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	SNRNP25	Q9BV90	132 aa	Known RBP	10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	ANKZF1	Q9H8Y5	726 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	RXFP1	Q9HBX9	757 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	ABCC13	Q9NSE7	274 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	STAU2	Q9NUL3	570 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	CALCOCO1	Q9P1Z2	691 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	LZTS1	Q9Y250	596 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	SSX2IP	Q9Y2D8	614 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	EFR3B	Q9Y2G0	817 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	RWDD3	Q9Y3V2	267 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	NR2E3	Q9Y5X4	410 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	BRCA2	P51587	3418 aa		10.42	□□□□□ -0.74
MRE11-210	ENST00000541157	LINC01553	A4QN01	128 aa		10.41	□□□□□ -0.74

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms