RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 MYH10P35580 1976 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 CAPN9O14815 690 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 LAMTOR5O43504 91 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 EGFP01133 1207 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 ERBB2P04626 1255 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 FYNP06241 537 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 HARS2P49590 506 aaKnown RBP9.64□□□□□ -0.87
SNHG1-215ENST00000540904 SNX16P57768 344 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 GAD2Q05329 585 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 TAF5Q15542 800 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 GAB4Q2WGN9 574 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 PTPN20Q4JDL3 420 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 DGKKQ5KSL6 1271 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 FSTL4Q6MZW2 842 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 MSANTD2Q6P1R3 559 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 Q6ZS52 159 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 CACNA2D4Q7Z3S7 1137 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 DENND1CQ8IV53 801 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 NAT16Q8N8M0 369 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 TMEM35BQ8NCS4 154 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 IPO4Q8TEX9 1081 aaKnown RBP9.64□□□□□ -0.87
SNHG1-215ENST00000540904 SLC20A1Q8WUM9 679 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 BHMTQ93088 406 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 PLD4Q96BZ4 506 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 PIWIL1Q96J94 861 aaKnown RBP9.64□□□□□ -0.87
SNHG1-215ENST00000540904 TRIM62Q9BVG3 475 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 DCLK3Q9C098 648 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 CHRDQ9H2X0 955 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 AGO1Q9UL18 857 aaKnown RBP9.64□□□□□ -0.87
SNHG1-215ENST00000540904 NAALADL1Q9UQQ1 740 aa9.64□□□□□ -0.87
SNHG1-215ENST00000540904 HBS1LQ9Y450 684 aaKnown RBP9.64□□□□□ -0.87
SNHG1-215ENST00000540904 A0A1B0GTH6 734 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 NEDD8-MDP1E9PL57 170 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 HOXC11O43248 304 aaPredicted RBP9.63□□□□□ -0.87
SNHG1-215ENST00000540904 GRAP2O75791 330 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 LSM8O95777 96 aaKnown RBP9.63□□□□□ -0.87
SNHG1-215ENST00000540904 DRD1P21728 446 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 CHKAP35790 457 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 OPRD1P41143 372 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 SLC6A11P48066 632 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 YWHAZP63104 245 aaKnown RBP9.63□□□□□ -0.87
SNHG1-215ENST00000540904 FANCCQ00597 558 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 NHLH1Q02575 133 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 CSTF1Q05048 431 aaKnown RBP9.63□□□□□ -0.87
SNHG1-215ENST00000540904 GAS6Q14393 721 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 NR1I3Q14994 352 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 TRIP4Q15650 581 aaPredicted RBP9.63□□□□□ -0.87
SNHG1-215ENST00000540904 DCAF6Q58WW2 860 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 SYPL2Q5VXT5 272 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 NAA35Q5VZE5 725 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 OR6B2Q6IFH4 312 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 FAM183BPQ6ZVS7 135 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 C12orf40Q86WS4 652 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 ADAM32Q8TC27 787 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 CPA5Q8WXQ8 436 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 ATOH1Q92858 354 aaPredicted RBP9.63□□□□□ -0.87
SNHG1-215ENST00000540904 BBS2Q9BXC9 721 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 IRF2BPLQ9H1B7 796 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 TSPY26PQ9H489 355 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 POPDC2Q9HBU9 364 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 FAM86C1Q9NVL1 165 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 NOCTQ9UK39 431 aaKnown RBP9.63□□□□□ -0.87
SNHG1-215ENST00000540904 ZNF510Q9Y2H8 683 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 KMT2EQ8IZD2 1858 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 MYO16Q9Y6X6 1858 aa9.63□□□□□ -0.87
SNHG1-215ENST00000540904 ZNF318Q5VUA4 2279 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 KIF26AQ9ULI4 1882 aaPredicted RBP9.62□□□□□ -0.87
SNHG1-215ENST00000540904 A0A1W2PQC6 194 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.62□□□□□ -0.87
SNHG1-215ENST00000540904 RNF40O75150 1001 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 TULP3O75386 442 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 KAT7O95251 611 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 TYRP14679 529 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 CHRNB2P17787 502 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 CDH5P33151 784 aaPredicted RBP9.62□□□□□ -0.87
SNHG1-215ENST00000540904 EIF2DP41214 584 aaKnown RBP9.62□□□□□ -0.87
SNHG1-215ENST00000540904 SEC13P55735 322 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 UBASH3AP57075 661 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 TBX4P57082 545 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 NOMO3P69849 1222 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 FMO1Q01740 532 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 CDR2Q01850 454 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 KDSRQ06136 332 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 MESP2Q0VG99 397 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 FBXO43Q4G163 708 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 C2CD6Q53TS8 623 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 EFHC1Q5JVL4 640 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 PKN3Q6P5Z2 889 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 TSSK4Q6SA08 328 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 OLFML1Q6UWY5 402 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 TOGARAM2Q6ZUX3 1019 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 BEND5Q7L4P6 421 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 TAC4Q86UU9 113 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 ERICH1Q86X53 443 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 ZNF677Q86XU0 584 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 SFTPA1Q8IWL2 248 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 ETFBKMTQ8IXQ9 262 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 MAML2Q8IZL2 1156 aaPredicted RBP9.62□□□□□ -0.87
SNHG1-215ENST00000540904 SYNPOQ8N3V7 929 aa9.62□□□□□ -0.87
SNHG1-215ENST00000540904 SPEM1Q8N4L4 309 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms