RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 PRAMEF27A3QJZ7 478 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 TRABD2BA6NFA1 517 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 E9PAM4 449 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 K7ERI5 159 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 ARHGAP6O43182 974 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 PAX4O43316 350 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 SOAT2O75908 522 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 NFATC1O95644 943 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 NFICP08651 508 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 MCF2P10911 925 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 HNRNPLP14866 589 aaKnown RBP eCLIP4.97□□□□□ -1.61
SNHG1-214ENST00000540865 ATF6P18850 670 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 CYP11B2P19099 503 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 GARTP22102 1010 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 PAX3P23760 479 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 MAP4P27816 1152 aaKnown RBP4.97□□□□□ -1.61
SNHG1-214ENST00000540865 PDIA3P30101 505 aaKnown RBP4.97□□□□□ -1.61
SNHG1-214ENST00000540865 LRPAP1P30533 357 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 IFNAR2P48551 515 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 EVCP57679 992 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 OSTNP61366 133 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 RACK1P63244 317 aaKnown RBP4.97□□□□□ -1.61
SNHG1-214ENST00000540865 ZNF33AQ06730 810 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 SMARCB1Q12824 385 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 MTF1Q14872 753 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 TAF12Q16514 161 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 ZNF568Q3ZCX4 644 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 WIPI1Q5MNZ9 446 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-214ENST00000540865 EOGTQ5NDL2 527 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 SNAP47Q5SQN1 464 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 OVOS1Q6IE37 1185 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 FBXL19Q6PCT2 694 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 DSTYKQ6XUX3 929 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 BEND4Q6ZU67 534 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 UBE3DQ7Z6J8 389 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 TMEM150AQ86TG1 271 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 TTC30AQ86WT1 665 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 TRIM42Q8IWZ5 723 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 GALNT15Q8N3T1 639 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 CCDC33Q8N5R6 958 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 TTC9BQ8N6N2 239 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 FRMD1Q8N878 549 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 MAB21L3Q8N8X9 362 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 RIN3Q8TB24 985 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 C2orf15Q8WU43 125 aaKnown RBP4.97□□□□□ -1.61
SNHG1-214ENST00000540865 MRPS31Q92665 395 aaKnown RBP4.97□□□□□ -1.61
SNHG1-214ENST00000540865 ELMO3Q96BJ8 720 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 SEPT5Q99719 369 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-214ENST00000540865 ACO2Q99798 780 aaKnown RBP4.97□□□□□ -1.61
SNHG1-214ENST00000540865 PI4K2AQ9BTU6 479 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 FAM124BQ9H5Z6 455 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-214ENST00000540865 CLMPQ9H6B4 373 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 TMEM206Q9H813 350 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 TTC12Q9H892 705 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-214ENST00000540865 METTL5Q9NRN9 209 aaKnown RBP4.97□□□□□ -1.61
SNHG1-214ENST00000540865 ADAMTS1Q9UHI8 967 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 PCOLCE2Q9UKZ9 415 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 TIMM13Q9Y5L4 95 aaPredicted RBP4.97□□□□□ -1.61
SNHG1-214ENST00000540865 MGAQ8IWI9 3026 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 TDRD15B5MCY1 1934 aaKnown RBP4.97□□□□□ -1.61
SNHG1-214ENST00000540865 NOTCH2Q04721 2471 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 PHLPP2Q6ZVD8 1323 aa4.97□□□□□ -1.61
SNHG1-214ENST00000540865 A0A087WWV3 80 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 ABLIM1O14639 778 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 RNGTTO60942 597 aaKnown RBP4.96□□□□□ -1.62
SNHG1-214ENST00000540865 KLF8O95600 359 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-214ENST00000540865 ZNF883P0CG24 379 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 ODC1P11926 461 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 CPA1P15085 419 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 TCF3P15923 654 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 HMGA1P17096 107 aaKnown RBP4.96□□□□□ -1.62
SNHG1-214ENST00000540865 CYP3A5P20815 502 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 PROZP22891 400 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 HSPA4P34932 840 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 EIF4A3P38919 411 aaKnown RBP4.96□□□□□ -1.62
SNHG1-214ENST00000540865 OPRD1P41143 372 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 CCT2P78371 535 aaKnown RBP4.96□□□□□ -1.62
SNHG1-214ENST00000540865 RPL6Q02878 288 aaKnown RBP4.96□□□□□ -1.62
SNHG1-214ENST00000540865 CFHR1Q03591 330 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 SCRN1Q12765 414 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 DMP1Q13316 513 aaPredicted RBP4.96□□□□□ -1.62
SNHG1-214ENST00000540865 NFKBIBQ15653 356 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 ZNF77Q15935 545 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 CALCRLQ16602 461 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 SLC10A6Q3KNW5 377 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 MGAT5BQ3V5L5 792 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 SLC39A12Q504Y0 691 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 TXNDC8Q6A555 127 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 MPZL3Q6UWV2 235 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 PIK3AP1Q6ZUJ8 805 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 NT5DC4Q86YG4 428 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 EFCAB13Q8IY85 973 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 SHISA5Q8N114 240 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 ALLCQ8N6M5 410 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 KIAA1958Q8N8K9 716 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 IL17RCQ8NAC3 791 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 TXNDC5Q8NBS9 432 aaKnown RBP4.96□□□□□ -1.62
SNHG1-214ENST00000540865 OR2I1PQ8NGU4 316 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 PIP4K2CQ8TBX8 421 aa4.96□□□□□ -1.62
SNHG1-214ENST00000540865 SPPL2BQ8TCT7 592 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms