RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 ZNHIT6Q9NWK9 470 aaKnown RBP17.48■□□□□ 0.39
UBC-208ENST00000540700 EHD2Q9NZN4 543 aa17.48■□□□□ 0.39
UBC-208ENST00000540700 ZFP37Q9Y6Q3 630 aaPredicted RBP17.48■□□□□ 0.39
UBC-208ENST00000540700 ANAPC1Q9H1A4 1944 aa17.48■□□□□ 0.39
UBC-208ENST00000540700 FANCMQ8IYD8 2048 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 COCHO43405 550 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 FBXO21O94952 628 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 PRAMEF12O95522 483 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 FGF19O95750 216 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 OLFM2O95897 454 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 ABL1P00519 1130 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 FTLP02792 175 aaPredicted RBP17.47■□□□□ 0.39
UBC-208ENST00000540700 GZMAP12544 262 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 RARGP13631 454 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 FCARP24071 287 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 GSCP56915 257 aaPredicted RBP17.47■□□□□ 0.39
UBC-208ENST00000540700 PITX1P78337 314 aaPredicted RBP17.47■□□□□ 0.39
UBC-208ENST00000540700 SLC6A3Q01959 620 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 LMNB2Q03252 620 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 PRKCQQ04759 706 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 SLC18A3Q16572 532 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 BSPRYQ5W0U4 402 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 ARL14EPQ8N8R7 260 aaPredicted RBP17.47■□□□□ 0.39
UBC-208ENST00000540700 PDZD8Q8NEN9 1154 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 IPO4Q8TEX9 1081 aaKnown RBP17.47■□□□□ 0.39
UBC-208ENST00000540700 IRGQQ8WZA9 623 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 EDEM1Q92611 657 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 MRPS31Q92665 395 aaKnown RBP17.47■□□□□ 0.39
UBC-208ENST00000540700 ZFRQ96KR1 1074 aaKnown RBP17.47■□□□□ 0.39
UBC-208ENST00000540700 KXD1Q9BQD3 176 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 DDX23Q9BUQ8 820 aaKnown RBP17.47■□□□□ 0.39
UBC-208ENST00000540700 ADAM33Q9BZ11 813 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 TASP1Q9H6P5 420 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 TRPC7Q9HCX4 862 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 LTB4R2Q9NPC1 389 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 TLR8Q9NR97 1041 aaKnown RBP17.47■□□□□ 0.39
UBC-208ENST00000540700 ZSCAN32Q9NX65 697 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 ADAM22Q9P0K1 906 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 NAALADL1Q9UQQ1 740 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 USP24Q9UPU5 2620 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 DENND4CQ5VZ89 1909 aa17.47■□□□□ 0.39
UBC-208ENST00000540700 PRR5-ARHGAP8B1AHC4 643 aa17.46■□□□□ 0.39
UBC-208ENST00000540700 GOLGA8SH3BPF8 625 aa17.46■□□□□ 0.39
UBC-208ENST00000540700 RTN2O75298 545 aa17.46■□□□□ 0.39
UBC-208ENST00000540700 LTFP02788 710 aa17.46■□□□□ 0.39
UBC-208ENST00000540700 RRM1P23921 792 aa17.46■□□□□ 0.39
UBC-208ENST00000540700 ARHGAP8P85298 464 aa17.46■□□□□ 0.39
UBC-208ENST00000540700 C1QBPQ07021 282 aaKnown RBP17.46■□□□□ 0.39
UBC-208ENST00000540700 ST3GAL2Q16842 350 aa17.46■□□□□ 0.39
UBC-208ENST00000540700 TSR1Q2NL82 804 aaKnown RBP17.46■□□□□ 0.39
UBC-208ENST00000540700 FAM78AQ5JUQ0 283 aa17.46■□□□□ 0.39
UBC-208ENST00000540700 CCDC122Q5T0U0 273 aa17.46■□□□□ 0.39
UBC-208ENST00000540700 OTUD1Q5VV17 481 aaPredicted RBP17.46■□□□□ 0.39
UBC-208ENST00000540700 SYPL2Q5VXT5 272 aa17.46■□□□□ 0.39
UBC-208ENST00000540700 ALKBH5Q6P6C2 394 aaKnown RBP17.46■□□□□ 0.39
UBC-208ENST00000540700 MTSS1LQ765P7 747 aa17.46■□□□□ 0.39
UBC-208ENST00000540700 JOSD2Q8TAC2 188 aa17.46■□□□□ 0.39
UBC-208ENST00000540700 WBP2Q969T9 261 aa17.46■□□□□ 0.39
UBC-208ENST00000540700 LRRC3BQ96PB8 259 aa17.46■□□□□ 0.39
UBC-208ENST00000540700 GCNAQ96QF7 691 aa17.46■□□□□ 0.39
UBC-208ENST00000540700 SYNCQ9H7C4 482 aa17.46■□□□□ 0.39
UBC-208ENST00000540700 TMEM59LQ9UK28 342 aa17.46■□□□□ 0.39
UBC-208ENST00000540700 CCL26Q9Y258 94 aa17.46■□□□□ 0.39
UBC-208ENST00000540700 TLR5O60602 858 aa17.45■□□□□ 0.38
UBC-208ENST00000540700 PPP3CCP48454 512 aa17.45■□□□□ 0.38
UBC-208ENST00000540700 PPP1R15BQ5SWA1 713 aa17.45■□□□□ 0.38
UBC-208ENST00000540700 HECTD3Q5T447 861 aa17.45■□□□□ 0.38
UBC-208ENST00000540700 FAM102AQ5T9C2 384 aaPredicted RBP17.45■□□□□ 0.38
UBC-208ENST00000540700 TPRG1Q6ZUI0 275 aa17.45■□□□□ 0.38
UBC-208ENST00000540700 SLC26A9Q7LBE3 791 aa17.45■□□□□ 0.38
UBC-208ENST00000540700 CMTM8Q8IZV2 173 aa17.45■□□□□ 0.38
UBC-208ENST00000540700 ZBTB44Q8NCP5 570 aa17.45■□□□□ 0.38
UBC-208ENST00000540700 ZSCAN18Q8TBC5 510 aaPredicted RBP17.45■□□□□ 0.38
UBC-208ENST00000540700 FAM149B1Q96BN6 582 aa17.45■□□□□ 0.38
UBC-208ENST00000540700 ARHGEF26Q96DR7 871 aa17.45■□□□□ 0.38
UBC-208ENST00000540700 CCDC42Q96M95 316 aa17.45■□□□□ 0.38
UBC-208ENST00000540700 ASB16Q96NS5 453 aa17.45■□□□□ 0.38
UBC-208ENST00000540700 SLC2A13Q96QE2 648 aa17.45■□□□□ 0.38
UBC-208ENST00000540700 BAG1Q99933 345 aaPredicted RBP17.45■□□□□ 0.38
UBC-208ENST00000540700 EPC1Q9H2F5 836 aa17.45■□□□□ 0.38
UBC-208ENST00000540700 DEF6Q9H4E7 631 aa17.45■□□□□ 0.38
UBC-208ENST00000540700 METTL5Q9NRN9 209 aaKnown RBP17.45■□□□□ 0.38
UBC-208ENST00000540700 CLIC5Q9NZA1 410 aa17.45■□□□□ 0.38
UBC-208ENST00000540700 CALCOCO1Q9P1Z2 691 aa17.45■□□□□ 0.38
UBC-208ENST00000540700 REXO2Q9Y3B8 237 aaKnown RBP17.45■□□□□ 0.38
UBC-208ENST00000540700 AKR1B10O60218 316 aa17.44■□□□□ 0.38
UBC-208ENST00000540700 TFE3P19532 575 aaPredicted RBP17.44■□□□□ 0.38
UBC-208ENST00000540700 DDX6P26196 483 aaKnown RBP eCLIP17.44■□□□□ 0.383e-6■□□□□ 8.8
UBC-208ENST00000540700 TARSP26639 723 aaKnown RBP17.44■□□□□ 0.38
UBC-208ENST00000540700 FLT3P36888 993 aa17.44■□□□□ 0.38
UBC-208ENST00000540700 TUBP50607 506 aa17.44■□□□□ 0.38
UBC-208ENST00000540700 GSDMDP57764 484 aa17.44■□□□□ 0.38
UBC-208ENST00000540700 PFKPQ01813 784 aa17.44■□□□□ 0.38
UBC-208ENST00000540700 ZNF268Q14587 947 aaPredicted RBP17.44■□□□□ 0.38
UBC-208ENST00000540700 LPAL2Q16609 132 aa17.44■□□□□ 0.38
UBC-208ENST00000540700 ARHGAP15Q53QZ3 475 aa17.44■□□□□ 0.38
UBC-208ENST00000540700 BTBD8Q5XKL5 378 aa17.44■□□□□ 0.38
UBC-208ENST00000540700 VPS36Q86VN1 386 aa17.44■□□□□ 0.38
UBC-208ENST00000540700 ARID3BQ8IVW6 561 aaPredicted RBP17.44■□□□□ 0.38
UBC-208ENST00000540700 DEFB106AQ8N104 65 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms