RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 CXorf38Q8TB03 319 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 CNKSR2Q8WXI2 1034 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 USP6NLQ92738 828 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 SIGLEC10Q96LC7 697 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 EBNA1BP2Q99848 306 aaKnown RBP12.73□□□□□ -0.37
NPC1-202ENST00000540608 THTPAQ9BU02 230 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 CDT1Q9H211 546 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 VRTNQ9H8Y1 702 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 THAP1Q9NVV9 213 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 SORCS3Q9UPU3 1222 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 TNFSF13BQ9Y275 285 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 MGAMO43451 1857 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 DCAF8L1A6NGE4 600 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 LACTBL1A8MY62 500 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 INO80B-WBP1J3KQ70 363 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 MAP3K13O43283 966 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 CACNA2D1P54289 1103 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 NBPF20Q3BBV1 942 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 SH3D19Q5HYK7 790 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 MDH1BQ5I0G3 518 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 NOL9Q5SY16 702 aaKnown RBP12.73□□□□□ -0.37
NPC1-202ENST00000540608 RNF220Q5VTB9 566 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 MAP1SQ66K74 1059 aaPredicted RBP12.73□□□□□ -0.37
NPC1-202ENST00000540608 TMEM130Q8N3G9 435 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 STKLD1Q8NE28 680 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.73□□□□□ -0.37
NPC1-202ENST00000540608 RILPQ96NA2 401 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 NR1H4Q96RI1 486 aaPredicted RBP12.73□□□□□ -0.37
NPC1-202ENST00000540608 INO80BQ9C086 356 aaPredicted RBP12.73□□□□□ -0.37
NPC1-202ENST00000540608 PCDH18Q9HCL0 1135 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 GPAMQ9HCL2 828 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 PAPOLBQ9NRJ5 636 aaKnown RBP12.73□□□□□ -0.37
NPC1-202ENST00000540608 PCMTD2Q9NV79 361 aa12.73□□□□□ -0.37
NPC1-202ENST00000540608 MARCOQ9UEW3 520 aaPredicted RBP12.73□□□□□ -0.37
NPC1-202ENST00000540608 SDR42E2A6NKP2 422 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 ARIH2O95376 493 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 GJB1P08034 283 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 P4HA1P13674 534 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 PAPOLAP51003 745 aaKnown RBP12.72□□□□□ -0.37
NPC1-202ENST00000540608 ALDH18A1P54886 795 aaKnown RBP12.72□□□□□ -0.37
NPC1-202ENST00000540608 AP2B1P63010 937 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 DBN1Q16643 649 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 STXBP5Q5T5C0 1151 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 MROH9Q5TGP6 573 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 SCYL2Q6P3W7 929 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 TRMT10BQ6PF06 316 aaKnown RBP12.72□□□□□ -0.37
NPC1-202ENST00000540608 KYAT3Q6YP21 454 aaKnown RBP12.72□□□□□ -0.37
NPC1-202ENST00000540608 CLPTM1LQ96KA5 538 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 SIKE1Q9BRV8 207 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 SLC7A8Q9UHI5 535 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 PRR5-ARHGAP8B1AHC4 643 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 PIK3R2O00459 728 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 DPYSL4O14531 572 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 GNAT1P11488 350 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 ARHGAP8P85298 464 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 HSDL1Q3SXM5 330 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 JADE1Q6IE81 842 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 LCLAT1Q6UWP7 414 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 CYS1Q717R9 158 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 ZNF534Q76KX8 674 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 DPH6Q7L8W6 267 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 NCAPG2Q86XI2 1143 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 ADGRF2Q8IZF7 708 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 PIWIL1Q96J94 861 aaKnown RBP12.72□□□□□ -0.37
NPC1-202ENST00000540608 NLRP4Q96MN2 994 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 TRAPPC9Q96Q05 1148 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 GBA2Q9HCG7 927 aaPredicted RBP12.72□□□□□ -0.37
NPC1-202ENST00000540608 GPATCH2LQ9NWQ4 482 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 KIAA1257Q9ULG3 409 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 C2CD2Q9Y426 696 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 PCDHA11Q9Y5I1 949 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 MAD1L1Q9Y6D9 718 aa12.72□□□□□ -0.37
NPC1-202ENST00000540608 GPR25O00155 361 aa12.71□□□□□ -0.37
NPC1-202ENST00000540608 GCATO75600 419 aa12.71□□□□□ -0.37
NPC1-202ENST00000540608 USP2O75604 605 aaPredicted RBP12.71□□□□□ -0.37
NPC1-202ENST00000540608 GRAP2O75791 330 aa12.71□□□□□ -0.37
NPC1-202ENST00000540608 AOC1P19801 751 aa12.71□□□□□ -0.37
NPC1-202ENST00000540608 TPSB2P20231 275 aa12.71□□□□□ -0.37
NPC1-202ENST00000540608 CYP3A5P20815 502 aa12.71□□□□□ -0.37
NPC1-202ENST00000540608 CNTFP26441 200 aa12.71□□□□□ -0.37
NPC1-202ENST00000540608 MBTD1Q05BQ5 628 aa12.71□□□□□ -0.37
NPC1-202ENST00000540608 VGLL4Q14135 290 aa12.71□□□□□ -0.37
NPC1-202ENST00000540608 TPSAB1Q15661 275 aa12.71□□□□□ -0.37
NPC1-202ENST00000540608 TMCO4Q5TGY1 634 aa12.71□□□□□ -0.37
NPC1-202ENST00000540608 RIOX2Q8IUF8 465 aa12.71□□□□□ -0.37
NPC1-202ENST00000540608 CDKL3Q8IVW4 592 aaPredicted RBP12.71□□□□□ -0.37
NPC1-202ENST00000540608 ZBTB10Q96DT7 871 aa12.71□□□□□ -0.37
NPC1-202ENST00000540608 TBCBQ99426 244 aa12.71□□□□□ -0.37
NPC1-202ENST00000540608 BARX2Q9UMQ3 279 aaPredicted RBP12.71□□□□□ -0.37
NPC1-202ENST00000540608 LGR5O75473 907 aa12.71□□□□□ -0.38
NPC1-202ENST00000540608 METTL18O95568 372 aa12.71□□□□□ -0.38
NPC1-202ENST00000540608 STAG3L1P0CL83 205 aa12.71□□□□□ -0.38
NPC1-202ENST00000540608 C1orf146Q5VVC0 180 aa12.71□□□□□ -0.38
NPC1-202ENST00000540608 PLPPR4Q7Z2D5 763 aa12.71□□□□□ -0.38
NPC1-202ENST00000540608 MPP5Q8N3R9 675 aa12.71□□□□□ -0.38
NPC1-202ENST00000540608 PHC3Q8NDX5 983 aa12.71□□□□□ -0.38
NPC1-202ENST00000540608 TRAPPC12Q8WVT3 735 aa12.71□□□□□ -0.38
NPC1-202ENST00000540608 HPDLQ96IR7 371 aa12.71□□□□□ -0.38
NPC1-202ENST00000540608 GPR20Q99678 358 aa12.71□□□□□ -0.38
NPC1-202ENST00000540608 EBF4Q9BQW3 602 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms