RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	SLC35F5	Q8WV83	523 aa		13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	DDX1	Q92499	740 aa	Known RBP	13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	DNAJC17	Q9NVM6	304 aa	Known RBP	13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	STOML2	Q9UJZ1	356 aa		13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.75	□□□□□ -0.21
SEMA4D-223	ENST00000540475	BICDL2	A1A5D9	508 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	NEDD8-MDP1	E9PL57	170 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	RNF225	M0QZC1	329 aa	Predicted RBP	13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	GFRA2	O00451	464 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	GABBR2	O75899	941 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	CAVIN2	O95810	425 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	GNA14	O95837	355 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	SETSIP	P0DME0	302 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	ZNF132	P52740	706 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	GCNT1	Q02742	428 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	ENPP2	Q13822	863 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	BYSL	Q13895	437 aa	Known RBP	13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	TRIP4	Q15650	581 aa	Predicted RBP	13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	CCDC6	Q16204	474 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	CNGA2	Q16280	664 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	GOLGA7B	Q2TAP0	167 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	C10orf76	Q5T2E6	689 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	PEAR1	Q5VY43	1037 aa	Predicted RBP	13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	ISM2	Q6H9L7	571 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	TPGS1	Q6ZTW0	290 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	TOGARAM2	Q6ZUX3	1019 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	C12orf50	Q8NA57	414 aa	Predicted RBP	13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	ULBP1	Q9BZM6	244 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	ZDHHC4	Q9NPG8	344 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	CNGB3	Q9NQW8	809 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	MARCH2	Q9P0N8	246 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	MBD1	Q9UIS9	605 aa	Predicted RBP	13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	AGO1	Q9UL18	857 aa	Known RBP	13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	CNTN6	Q9UQ52	1028 aa		13.74	□□□□□ -0.21
SEMA4D-223	ENST00000540475	NPC1	O15118	1278 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	ADRB1	P08588	477 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	C7	P10643	843 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	GABRG2	P18507	467 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	CORO1A	P31146	461 aa	Known RBP	13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	RPL34	P49207	117 aa	Known RBP	13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	DGKG	P49619	791 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	CREB5	Q02930	508 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	EFEMP1	Q12805	493 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	STIL	Q15468	1287 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	AASDH	Q4L235	1098 aa	Predicted RBP	13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	STPG1	Q5TH74	334 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	EGFLAM	Q63HQ2	1017 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	SMYD5	Q6GMV2	418 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	TRIML1	Q8N9V2	468 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	EHBP1	Q8NDI1	1231 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	NELFB	Q8WX92	580 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	TFAP2B	Q92481	460 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	PLD4	Q96BZ4	506 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	PIWIL1	Q96J94	861 aa	Known RBP	13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	NT5C1B	Q96P26	610 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	ZSWIM1	Q9BR11	485 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	SLC2A11	Q9BYW1	496 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	OLA1	Q9NTK5	396 aa	Known RBP	13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	HESX1	Q9UBX0	185 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	RASAL2	Q9UJF2	1139 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	INVS	Q9Y283	1065 aa		13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	HBS1L	Q9Y450	684 aa	Known RBP	13.73	□□□□□ -0.21
SEMA4D-223	ENST00000540475	GON4L	Q3T8J9	2241 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	TCRBV21S2A2	A0A5A6	115 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	YJEFN3	A6XGL0	299 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475		E7ENQ6	273 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	LATS1	O95835	1130 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	HOXB2	P14652	356 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	GBP1	P32455	592 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	MFAP3	P55082	362 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	DAOA	P59103	153 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	CETN1	Q12798	172 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	KCNH2	Q12809	1159 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	LRMP	Q12912	555 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	BSPRY	Q5W0U4	402 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	MSANTD2	Q6P1R3	559 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	TMEM270	Q6UE05	265 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	FRMD1	Q8N878	549 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	UBA3	Q8TBC4	463 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	IPO4	Q8TEX9	1081 aa	Known RBP	13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	IRGQ	Q8WZA9	623 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	NDRG1	Q92597	394 aa	Known RBP	13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	SPACA7	Q96KW9	195 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	HSFY1	Q96LI6	401 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	ACOX2	Q99424	681 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	LSM14B	Q9BX40	385 aa	Known RBP	13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	IRX2	Q9BZI1	471 aa	Predicted RBP	13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	SMOC1	Q9H4F8	434 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	LRRC4	Q9HBW1	653 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	ABCC13	Q9NSE7	274 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	EVL	Q9UI08	416 aa	Predicted RBP	13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	STRIP2	Q9ULQ0	834 aa		13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
SEMA4D-223	ENST00000540475	SLC12A8	A0AV02	714 aa		13.71	□□□□□ -0.21
SEMA4D-223	ENST00000540475	LNP1	A1A4G5	178 aa		13.71	□□□□□ -0.21
SEMA4D-223	ENST00000540475	IGLV3-27	P01718	113 aa		13.71	□□□□□ -0.21
SEMA4D-223	ENST00000540475	CD19	P15391	556 aa		13.71	□□□□□ -0.21
SEMA4D-223	ENST00000540475	HOXD12	P35452	270 aa		13.71	□□□□□ -0.21
SEMA4D-223	ENST00000540475	DPP6	P42658	865 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms