RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 LIMCH1Q9UPQ0 1083 aa8.45□□□□□ -1.06
LRP6-204ENST00000540415 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.45□□□□□ -1.06
LRP6-204ENST00000540415 COL5A1P20908 1838 aaPredicted RBP8.45□□□□□ -1.06
LRP6-204ENST00000540415 UBR5O95071 2799 aaPredicted RBP8.44□□□□□ -1.06
LRP6-204ENST00000540415 TEX15Q9BXT5 2789 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.44□□□□□ -1.06
LRP6-204ENST00000540415 A8MXQ7 604 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 SYNCRIPO60506 623 aaKnown RBP8.44□□□□□ -1.06
LRP6-204ENST00000540415 TACC1O75410 805 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 RFPL3O75679 317 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 BEST1O76090 585 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 PRPF6O94906 941 aaKnown RBP8.44□□□□□ -1.06
LRP6-204ENST00000540415 FSBPO95073 299 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 RTN3O95197 1032 aaPredicted RBP8.44□□□□□ -1.06
LRP6-204ENST00000540415 GCNT3O95395 438 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 WNT1P04628 370 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 EPHX1P07099 455 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 ACADMP11310 421 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 GARTP22102 1010 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 UBA7P41226 1012 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 GRIA4P48058 902 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 ACADVLP49748 655 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 TUBP50607 506 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 MFAP3P55082 362 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 CDH8P55286 799 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 HMGN5P82970 282 aaKnown RBP8.44□□□□□ -1.06
LRP6-204ENST00000540415 KCNC4Q03721 635 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 KCNH2Q12809 1159 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 ORC1Q13415 861 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 FYB2Q5VWT5 728 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 TMEM215Q68D42 235 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 FBXL19Q6PCT2 694 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 Q6ZNB5 142 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 GPRIN1Q7Z2K8 1008 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 TRAPPC11Q7Z392 1133 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 RBBP8NLQ8NC74 664 aaPredicted RBP8.44□□□□□ -1.06
LRP6-204ENST00000540415 B3GALNT2Q8NCR0 500 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 BAP1Q92560 729 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 FGF11Q92914 225 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 BIRC7Q96CA5 298 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 HVCN1Q96D96 273 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 TMEM176AQ96HP8 235 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 CNDP2Q96KP4 475 aaKnown RBP8.44□□□□□ -1.06
LRP6-204ENST00000540415 SMOQ99835 787 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 SMYD3Q9H7B4 428 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 NMUR1Q9HB89 426 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 PTPN13Q12923 2485 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 MYH11P35749 1972 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 NBPF19A0A087WUL8 3843 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 CABIN1Q9Y6J0 2220 aa8.44□□□□□ -1.06
LRP6-204ENST00000540415 A0A1B0GTQ1 180 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 FAM92AA1XBS5 289 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 B8ZZF3 427 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 ERVH48-1M5A8F1 160 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 WNT9AO14904 365 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 CYP26A1O43174 497 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 TSPAN3O60637 253 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 AP1G2O75843 785 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 LDOC1O95751 146 aaPredicted RBP8.43□□□□□ -1.06
LRP6-204ENST00000540415 LDHAP00338 332 aaKnown RBP8.43□□□□□ -1.06
LRP6-204ENST00000540415 TNNC2P02585 160 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 KLKB1P03952 638 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 CCDC130P13994 396 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 ABCD1P33897 745 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 HNF1BP35680 557 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 SRSF1Q07955 248 aaKnown RBP eCLIP8.43□□□□□ -1.06
LRP6-204ENST00000540415 TEAD4Q15561 434 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 DUOXA2Q1HG44 320 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 WDR72Q3MJ13 1102 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 RILPL1Q5EBL4 403 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 ARHGAP40Q5TG30 622 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 ARL6IP4Q66PJ3 421 aaKnown RBP8.43□□□□□ -1.06
LRP6-204ENST00000540415 SYCP3Q8IZU3 236 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 GPD1LQ8N335 351 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 EID2Q8N6I1 236 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 KRI1Q8N9T8 703 aaKnown RBP8.43□□□□□ -1.06
LRP6-204ENST00000540415 RASSF8Q8NHQ8 419 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 JAKMIP2Q96AA8 810 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 DNAJC19Q96DA6 116 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 PIWIL1Q96J94 861 aaKnown RBP8.43□□□□□ -1.06
LRP6-204ENST00000540415 SLC6A18Q96N87 628 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 MED10Q9BTT4 135 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.43□□□□□ -1.06
LRP6-204ENST00000540415 TRIM4Q9C037 500 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 CIPCQ9C0C6 399 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 NRSN2Q9GZP1 204 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 EBF2Q9HAK2 575 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 KRT82Q9NSB4 513 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 NXF1Q9UBU9 619 aaKnown RBP8.43□□□□□ -1.06
LRP6-204ENST00000540415 SLC27A6Q9Y2P4 619 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 R3HCC1Q9Y3T6 440 aaKnown RBP8.43□□□□□ -1.06
LRP6-204ENST00000540415 PCDHGA1Q9Y5H4 931 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 BSNQ9UPA5 3926 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 BOD1L1Q8NFC6 3051 aa8.43□□□□□ -1.06
LRP6-204ENST00000540415 A0A1W2PQH9 124 aa8.42□□□□□ -1.06
LRP6-204ENST00000540415 PAPSS1O43252 624 aaPredicted RBP8.42□□□□□ -1.06
LRP6-204ENST00000540415 SLC28A2O43868 658 aa8.42□□□□□ -1.06
LRP6-204ENST00000540415 WISP1O95388 367 aa8.42□□□□□ -1.06
LRP6-204ENST00000540415 SEMA4FO95754 770 aa8.42□□□□□ -1.06
LRP6-204ENST00000540415 PENKP01210 267 aaPredicted RBP8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms