RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 CYP7B1O75881 506 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 ALBP02768 609 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 TAL1P17542 331 aaPredicted RBP11.41□□□□□ -0.58
PBX1-212ENST00000540236 VAMP7P51809 220 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 MAPRE1Q15691 268 aaKnown RBP11.41□□□□□ -0.58
PBX1-212ENST00000540236 FNBP1LQ5T0N5 605 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 TMEM236Q5W0B7 351 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 SCFD1Q8WVM8 642 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 LRRC39Q96DD0 335 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 FERD3LQ96RJ6 166 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 SLC7A5P2Q9GIP4 190 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 GPR108Q9NPR9 543 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 TMEM114B3SHH9 223 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 KRT20P35900 424 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 KCNJ8Q15842 424 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 SPDYCQ5MJ68 293 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 N4BP2L1Q5TBK1 243 aaPredicted RBP11.41□□□□□ -0.58
PBX1-212ENST00000540236 VASH1Q7L8A9 365 aaPredicted RBP11.41□□□□□ -0.58
PBX1-212ENST00000540236 CCNYQ8ND76 341 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 ZNF555Q8NEP9 628 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 PTCD3Q96EY7 689 aaKnown RBP11.41□□□□□ -0.58
PBX1-212ENST00000540236 GANQ9H2C0 597 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 GPAMQ9HCL2 828 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 RAB6BQ9NRW1 208 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 PDZK1P1A8MUH7 402 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 A8MX80 341 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 ZNF12P17014 697 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 KDELC2Q7Z4H8 507 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 IRF2BP2Q7Z5L9 587 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 MIER2Q8N344 545 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 RCN3Q96D15 328 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 ZNF512Q96ME7 567 aaPredicted RBP11.41□□□□□ -0.58
PBX1-212ENST00000540236 ZNF717Q9BY31 904 aaPredicted RBP11.41□□□□□ -0.58
PBX1-212ENST00000540236 HMG20AQ9NP66 347 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 ERVK-11Q9UQG0 969 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 SNX8Q9Y5X2 465 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 NCAPD2Q15021 1401 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 SH3PXD2BA1X283 911 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 BUD23O43709 281 aaKnown RBP11.41□□□□□ -0.58
PBX1-212ENST00000540236 PABPC4LP0CB38 370 aaKnown RBP11.41□□□□□ -0.58
PBX1-212ENST00000540236 MLLT3P42568 568 aaPredicted RBP11.41□□□□□ -0.58
PBX1-212ENST00000540236 SERPINH1P50454 418 aaKnown RBP11.41□□□□□ -0.58
PBX1-212ENST00000540236 ROR1Q01973 937 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 TBCCQ15814 346 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 BRSK2Q8IWQ3 736 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 BARHL2Q9NY43 387 aa11.41□□□□□ -0.58
PBX1-212ENST00000540236 KBTBD13C9JR72 458 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 TBC1D4O60343 1298 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 SNRPAP09012 282 aaKnown RBP11.4□□□□□ -0.58
PBX1-212ENST00000540236 HSMCR30P0CW71 290 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 ELK3P41970 407 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 FCHO2Q0JRZ9 810 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 NKX1-1Q15270 411 aaPredicted RBP11.4□□□□□ -0.58
PBX1-212ENST00000540236 ZFP69Q49AA0 526 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 CES3Q6UWW8 571 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 KYQ8NBH2 561 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 SERAC1Q96JX3 654 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 HNRNPABQ99729 332 aaKnown RBP11.4□□□□□ -0.58
PBX1-212ENST00000540236 TTYH2Q9BSA4 534 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 KRBA1A5PL33 1030 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 MYO1GB0I1T2 1018 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 RFC4P35249 363 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 IL12RB1P42701 662 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 CCT3P49368 545 aaKnown RBP11.4□□□□□ -0.58
PBX1-212ENST00000540236 FAM69CQ0P6D2 419 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 PITRM1Q5JRX3 1037 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 SYDE1Q6ZW31 735 aaPredicted RBP11.4□□□□□ -0.58
PBX1-212ENST00000540236 CLEC10AQ8IUN9 316 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 PRICKLE1Q96MT3 831 aaPredicted RBP11.4□□□□□ -0.58
PBX1-212ENST00000540236 MBOAT7Q96N66 472 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 PKP2Q99959 881 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 BAG5Q9UL15 447 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 PCDHGB4Q9UN71 923 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 PCDHGB5Q9Y5G0 923 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 PXDNLA1KZ92 1463 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 RARBP10826 455 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 DNAAF3Q8N9W5 541 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 ST13P5Q8NFI4 369 aaPredicted RBP11.4□□□□□ -0.58
PBX1-212ENST00000540236 PLEKHO2Q8TD55 490 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 ATP6V1E2Q96A05 226 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 TBCCD1Q9NVR7 557 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 TMX2-CTNND1H3BSU7 103 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 SPDYAQ5MJ70 313 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 C4orf22Q6V702 233 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 KCNK4Q9NYG8 393 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 PCYOX1Q9UHG3 505 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 OGDHLQ9ULD0 1010 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 RAB26Q9ULW5 256 aa11.4□□□□□ -0.58
PBX1-212ENST00000540236 CEP170BQ9Y4F5 1589 aaPredicted RBP11.4□□□□□ -0.59
PBX1-212ENST00000540236 BTDP43251 543 aa11.4□□□□□ -0.59
PBX1-212ENST00000540236 PIGFQ07326 219 aa11.4□□□□□ -0.59
PBX1-212ENST00000540236 BBS5Q8N3I7 341 aa11.4□□□□□ -0.59
PBX1-212ENST00000540236 PNPLA3Q9NST1 481 aa11.4□□□□□ -0.59
PBX1-212ENST00000540236 SEC24AO95486 1093 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 CHRNB2P17787 502 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 GRIA3P42263 894 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 NAMPTP43490 491 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 PTK6Q13882 451 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 C12orf60Q5U649 245 aa11.39□□□□□ -0.59
PBX1-212ENST00000540236 ZNF410Q86VK4 478 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms