RNA–Protein interactions for RNA: ENST00000540086.5

CDH19-203, Transcript of cadherin 19, humanhuman

TSL 2 BASIC

Gene CDH19, Length 1,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH19-203ENST00000540086 CASP10Q92851 521 aa7.18□□□□□ -1.26
CDH19-203ENST00000540086 KCTD15Q96SI1 283 aaPredicted RBP7.18□□□□□ -1.26
CDH19-203ENST00000540086 TCF25Q9BQ70 676 aa7.18□□□□□ -1.26
CDH19-203ENST00000540086 TRIM51Q9BSJ1 452 aa7.18□□□□□ -1.26
CDH19-203ENST00000540086 TRIM62Q9BVG3 475 aa7.18□□□□□ -1.26
CDH19-203ENST00000540086 DCLK3Q9C098 648 aa7.18□□□□□ -1.26
CDH19-203ENST00000540086 WDR6Q9NNW5 1121 aaKnown RBP7.18□□□□□ -1.26
CDH19-203ENST00000540086 ANLNQ9NQW6 1124 aa7.18□□□□□ -1.26
CDH19-203ENST00000540086 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.18□□□□□ -1.26
CDH19-203ENST00000540086 ABCC13Q9NSE7 274 aa7.18□□□□□ -1.26
CDH19-203ENST00000540086 MTMR10Q9NXD2 777 aa7.18□□□□□ -1.26
CDH19-203ENST00000540086 RRN3Q9NYV6 651 aa7.18□□□□□ -1.26
CDH19-203ENST00000540086 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.18□□□□□ -1.26
CDH19-203ENST00000540086 IL37Q9NZH6 218 aa7.18□□□□□ -1.26
CDH19-203ENST00000540086 STIM2Q9P246 746 aa7.18□□□□□ -1.26
CDH19-203ENST00000540086 SAE1Q9UBE0 346 aaPredicted RBP7.18□□□□□ -1.26
CDH19-203ENST00000540086 SFMBT1Q9UHJ3 866 aa7.18□□□□□ -1.26
CDH19-203ENST00000540086 FZD10Q9ULW2 581 aa7.18□□□□□ -1.26
CDH19-203ENST00000540086 FAM92AA1XBS5 289 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 TARSL2A2RTX5 802 aaKnown RBP7.17□□□□□ -1.26
CDH19-203ENST00000540086 I6L893 689 aaPredicted RBP7.17□□□□□ -1.26
CDH19-203ENST00000540086 PRRG1O14668 218 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 CXCL14O95715 111 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 TBX18O95935 607 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 IL4RP24394 825 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 DNAJB1P25685 340 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 DR1Q01658 176 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 GUCY2DQ02846 1103 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 PDK2Q15119 407 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 TRADDQ15628 312 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 DPYSL2Q16555 572 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 CYP1B1Q16678 543 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 PLPP4Q5VZY2 271 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 BBS12Q6ZW61 710 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 BEND5Q7L4P6 421 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 MAP7D3Q8IWC1 876 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 GSPT2Q8IYD1 628 aaKnown RBP7.17□□□□□ -1.26
CDH19-203ENST00000540086 CCDC105Q8IYK2 499 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 ARHGAP18Q8N392 663 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 C12orf50Q8NA57 414 aaPredicted RBP7.17□□□□□ -1.26
CDH19-203ENST00000540086 CCDC26Q8TAB7 109 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 RNF139Q8WU17 664 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 RNF34Q969K3 372 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 PGAP3Q96FM1 320 aaPredicted RBP7.17□□□□□ -1.26
CDH19-203ENST00000540086 LRRC19Q9H756 370 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 RXFP1Q9HBX9 757 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 ENTPD7Q9NQZ7 604 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 FNIP2Q9P278 1114 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 FBXW11Q9UKB1 542 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 NR2E3Q9Y5X4 410 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 HIDE1A8MVS5 230 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 IRAK2O43187 625 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 TGM5O43548 720 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 F9P00740 461 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 IGLV3-25P01717 112 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 CA3P07451 260 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 RARGP13631 454 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 H2AFXP16104 143 aaPredicted RBP7.17□□□□□ -1.26
CDH19-203ENST00000540086 PECAM1P16284 738 aaPredicted RBP7.17□□□□□ -1.26
CDH19-203ENST00000540086 GOT1P17174 413 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 GBP1P32455 592 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 ELF1P32519 619 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 ADRA1BP35368 520 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 GGCXP38435 758 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 PTGIRP43119 386 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 ALDH1A3P47895 512 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 FNTAP49354 379 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 CXCR3P49682 368 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 CREMQ03060 361 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 TWF1Q12792 350 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 ANKRD20A8PQ5CZ79 823 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 EFHC2Q5JST6 749 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 NPNTQ6UXI9 565 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 SND1Q7KZF4 910 aaKnown RBP eCLIP7.17□□□□□ -1.26
CDH19-203ENST00000540086 MAATS1Q7Z4T9 603 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 JAMLQ86YT9 394 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 PQLC3Q8N755 202 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 PCDH19Q8TAB3 1148 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 POF1BQ8WVV4 589 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 KLHL5Q96PQ7 755 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 CSPG4P5Q96PW8 444 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 RNF157Q96PX1 679 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 ZNF670Q9BS34 389 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 TTLL2Q9BWV7 592 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 MAK16Q9BXY0 300 aaKnown RBP7.17□□□□□ -1.26
CDH19-203ENST00000540086 TRIM31Q9BZY9 425 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 TKTL2Q9H0I9 626 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 SMOC2Q9H3U7 446 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 WDCPQ9H6R7 721 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 EPB41L5Q9HCM4 733 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 TLR8Q9NR97 1041 aaKnown RBP7.17□□□□□ -1.26
CDH19-203ENST00000540086 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.17□□□□□ -1.26
CDH19-203ENST00000540086 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.17□□□□□ -1.26
CDH19-203ENST00000540086 STK39Q9UEW8 545 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 PCYOX1Q9UHG3 505 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 RAB21Q9UL25 225 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 EFR3BQ9Y2G0 817 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 INSL5Q9Y5Q6 135 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 SNX10Q9Y5X0 201 aa7.17□□□□□ -1.26
CDH19-203ENST00000540086 NLRC5Q86WI3 1866 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms