RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 VAV1P15498 845 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 NCF2P19878 526 aaPredicted RBP14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 COPAP53621 1224 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 YWHAEP62258 255 aaKnown RBP14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 XKR3Q5GH77 459 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 MBLAC2Q68D91 279 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 SCYL2Q6P3W7 929 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 ZNF534Q76KX8 674 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 TRIM42Q8IWZ5 723 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 PLD5Q8N7P1 536 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 NETO2Q8NC67 525 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 MOCOSQ96EN8 888 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 MPP4Q96JB8 637 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 VCX3BQ9H321 246 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 RSAD1Q9HA92 442 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 PREBQ9HCU5 417 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 VCX3AQ9NNX9 186 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 ACSS2Q9NR19 701 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 LMCD1Q9NZU5 365 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 ZNF180Q9UJW8 692 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 WDR46O15213 610 aaKnown RBP14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 KRT38O76015 456 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 IL4RP24394 825 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 CRHR1P34998 444 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 NAMPTP43490 491 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 SLC1A6P48664 564 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 CA9Q16790 459 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 PABPC1LQ4VXU2 614 aaKnown RBP14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 PPM1JQ5JR12 505 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 N4BP2L1Q5TBK1 243 aaPredicted RBP14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 NLGN1Q8N2Q7 840 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 RDM1Q8NG50 284 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 AGR3Q8TD06 166 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 TFB1MQ8WVM0 346 aaKnown RBP14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 GPRASP2Q96D09 838 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 FRMD8P1Q9BZ68 369 aaPredicted RBP14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 RPAP3Q9H6T3 665 aaPredicted RBP14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 ZNF358Q9NW07 568 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 THSD7AQ9UPZ6 1657 aa14.4□□□□□ -0.1
SCNN1A-215ENST00000540037 COL2A1P02458 1487 aaPredicted RBP14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 SPAG6O75602 509 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 PIGRP01833 764 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 POLR2BP30876 1174 aaKnown RBP14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 ARL2P36404 184 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 FOLH1Q04609 750 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 TLR1Q15399 786 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 WDR49Q8IV35 697 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 TMEM192Q8IY95 271 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 DEPDC1BQ8WUY9 529 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 GJD4Q96KN9 370 aaPredicted RBP14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 DHX33Q9H6R0 707 aaKnown RBP14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 ZDHHC7Q9NXF8 308 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 APOBEC2Q9Y235 224 aaKnown RBP14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 COMMD3-BMI1R4GMX3 469 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 H0YCG3 227 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 H3BNX3 289 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 ALDOAP04075 364 aaKnown RBP14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 SRGAP2CP0DJJ0 459 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 ITGAXP20702 1163 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 IDH3AP50213 366 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 PRKG1Q13976 671 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 PPP6R3Q5H9R7 873 aaPredicted RBP14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 UGT2A3Q6UWM9 527 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 C10orf107Q8IVU9 208 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 WDR75Q8IWA0 830 aaKnown RBP14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 PQLC3Q8N755 202 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 SIGLEC10Q96LC7 697 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 ADPGKQ9BRR6 497 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 INPP5FQ9Y2H2 1132 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 PSAT1Q9Y617 370 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 MYO18AQ92614 2054 aaKnown RBP14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 VWA5AO00534 786 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 DCXO43602 365 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 CCNT2O60583 730 aaKnown RBP14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 ZBED1O96006 694 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 SUPT20HL2P0C7V6 817 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 L1CAMP32004 1257 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 ATXN3P54252 364 aaPredicted RBP14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 DUOXA2Q1HG44 320 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 SUPT20HL1Q3ZLR7 823 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 LGSNQ5TDP6 509 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 PGM2L1Q6PCE3 622 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 AAGABQ6PD74 315 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 FNIP1Q8TF40 1166 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 SLC7A3Q8WY07 619 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 RNF157Q96PX1 679 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 SORT1Q99523 831 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 RNPEPQ9H4A4 650 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 UBAP1Q9NZ09 502 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 PAK5Q9P286 719 aa14.39□□□□□ -0.11
SCNN1A-215ENST00000540037 C15orf38-AP3S2A0A0A6YYH1 394 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 TPP1O14773 563 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 HNRNPRO43390 633 aaKnown RBP14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 SMIM18P0DKX4 95 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 GRM2Q14416 872 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 TMC7Q7Z402 723 aa14.38□□□□□ -0.11
SCNN1A-215ENST00000540037 ARPINQ7Z6K5 226 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms