RNA–Protein interactions for RNA: ENST00000539982.5

CLSTN3-209, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-209ENST00000539982 UCMAQ8WVF2 138 aa12.26□□□□□ -0.45
CLSTN3-209ENST00000539982 BHMTQ93088 406 aa12.26□□□□□ -0.45
CLSTN3-209ENST00000539982 DCBLD2Q96PD2 775 aa12.26□□□□□ -0.45
CLSTN3-209ENST00000539982 SMOQ99835 787 aa12.26□□□□□ -0.45
CLSTN3-209ENST00000539982 PANK2Q9BZ23 570 aa12.26□□□□□ -0.45
CLSTN3-209ENST00000539982 VRTNQ9H8Y1 702 aa12.26□□□□□ -0.45
CLSTN3-209ENST00000539982 CSNK1G1Q9HCP0 422 aa12.26□□□□□ -0.45
CLSTN3-209ENST00000539982 OSGEPQ9NPF4 335 aa12.26□□□□□ -0.45
CLSTN3-209ENST00000539982 SNX11Q9Y5W9 270 aa12.26□□□□□ -0.45
CLSTN3-209ENST00000539982 CLIC4Q9Y696 253 aa12.26□□□□□ -0.45
CLSTN3-209ENST00000539982 KNL1Q8NG31 2342 aa12.26□□□□□ -0.45
CLSTN3-209ENST00000539982 CABIN1Q9Y6J0 2220 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 ATXN7O15265 892 aaPredicted RBP12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 PCDHGA12O60330 932 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 C1QL1O75973 258 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 PENKP01210 267 aaPredicted RBP12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 HLA-EP13747 358 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 STAT6P42226 847 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 GRK6P43250 576 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 COPAP53621 1224 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 MFAP3P55082 362 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 CYP24A1Q07973 514 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 TEAD4Q15561 434 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 GEN1Q17RS7 908 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 KLHDC10Q6PID8 442 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 Q6ZNB5 142 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 ACOT1Q86TX2 421 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 TMPRSS12Q86WS5 348 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 PIP4K2CQ8TBX8 421 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 ZNF507Q8TCN5 953 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 P2RY11Q96G91 374 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 CLIC6Q96NY7 704 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 SMYD3Q9H7B4 428 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 KRT82Q9NSB4 513 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 OSER1Q9NX31 292 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 DNMT3LQ9UJW3 386 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 SMC3Q9UQE7 1217 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 SCML2Q9UQR0 700 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 ANKRD6Q9Y2G4 727 aa12.25□□□□□ -0.45
CLSTN3-209ENST00000539982 KCNK3O14649 394 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 EIF3DO15371 548 aaKnown RBP eCLIP12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 TGFB1I1O43294 461 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 PHACTR2O75167 634 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 ITPKBP27987 946 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 CHKAP35790 457 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 MAP3K7CLP57077 242 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 SNRPFP62306 86 aaKnown RBP12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 ORC1Q13415 861 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 ZNF234Q14588 700 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 BMT2Q1RMZ1 405 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 CCDC157Q569K6 752 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 ZNF667Q5HYK9 610 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 FYB2Q5VWT5 728 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 DHRS13Q6UX07 377 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 CRYBG2Q8N1P7 616 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 XXYLT1Q8NBI6 393 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 SLC2A14Q8TDB8 520 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 HPS3Q969F9 1004 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 IGSF8Q969P0 613 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 PIWIL1Q96J94 861 aaKnown RBP12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 GZF1Q9H116 711 aaPredicted RBP12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 PRORYQ9H606 182 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 NMUR1Q9HB89 426 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 AGPAT3Q9NRZ7 376 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 ELOVL2Q9NXB9 296 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 ZNF510Q9Y2H8 683 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 SLCO1B1Q9Y6L6 691 aa12.24□□□□□ -0.45
CLSTN3-209ENST00000539982 KNTC1P50748 2209 aa12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 PLK4O00444 970 aa12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 CLIC2O15247 247 aa12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 TIMM44O43615 452 aa12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 STC2O76061 302 aa12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 KLKB1P03952 638 aa12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 RARGP13631 454 aa12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 CCDC130P13994 396 aa12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 EIF2S3P41091 472 aaKnown RBP12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 GRIA4P48058 902 aa12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 RABEP1Q15276 862 aa12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 LRRC69Q6ZNQ3 347 aa12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 EPM2AIP1Q7L775 607 aaPredicted RBP12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 ZNF605Q86T29 641 aa12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 FAM124AQ86V42 546 aa12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 ZNF276Q8N554 614 aa12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 RBBP8NLQ8NC74 664 aaPredicted RBP12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 SNX19Q92543 992 aa12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 LRRC27Q9C0I9 530 aa12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 SDCBP2Q9H190 292 aa12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 C6orf106Q9H6K1 298 aaPredicted RBP12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 TM9SF3Q9HD45 589 aa12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 NUDT5Q9UKK9 219 aa12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.23□□□□□ -0.45
CLSTN3-209ENST00000539982 A0A087X0B3 334 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 A0A1W2PQH9 124 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 H0Y8X5 98 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 MDM4O15151 490 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 CYP26A1O43174 497 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 DFNA5O60443 496 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 EPHX1P07099 455 aa12.22□□□□□ -0.45
CLSTN3-209ENST00000539982 C7P10643 843 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms