RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 TOGARAM2Q6ZUX3 1019 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 APTXQ7Z2E3 356 aaKnown RBP6.8□□□□□ -1.32
SNHG1-212ENST00000539975 PIGZQ86VD9 579 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 SLC47A2Q86VL8 602 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 MON1AQ86VX9 555 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 NLRC5Q86WI3 1866 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 ERICH1Q86X53 443 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 CNGA4Q8IV77 575 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 TTC16Q8NEE8 873 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 ING5Q8WYH8 240 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 KCTD13Q8WZ19 329 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 SUSD6Q92537 303 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 FGF13Q92913 245 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 SECISBP2LQ93073 1101 aaKnown RBP6.8□□□□□ -1.32
SNHG1-212ENST00000539975 PPP1R13BQ96KQ4 1090 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 HSFY1Q96LI6 401 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 MYRFLQ96LU7 910 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.8□□□□□ -1.324e-59■■■□□ 16.1
SNHG1-212ENST00000539975 NAA15Q9BXJ9 866 aaKnown RBP6.8□□□□□ -1.32
SNHG1-212ENST00000539975 RBSNQ9H1K0 784 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 GANQ9H2C0 597 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 LHX5Q9H2C1 402 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 DEF6Q9H4E7 631 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 TASP1Q9H6P5 420 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 ZFP14Q9HCL3 533 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 IGSF9Q9P2J2 1179 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 CHORDC1Q9UHD1 332 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-212ENST00000539975 DMGDHQ9UI17 866 aaKnown RBP6.8□□□□□ -1.32
SNHG1-212ENST00000539975 NAGPAQ9UK23 515 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 STRIP2Q9ULQ0 834 aa6.8□□□□□ -1.32
SNHG1-212ENST00000539975 COL4A4P53420 1690 aaPredicted RBP6.8□□□□□ -1.32
SNHG1-212ENST00000539975 ITIH6Q6UXX5 1313 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 PLXNA4Q9HCM2 1894 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 LRRC53A6NM62 1247 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 NRDCO43847 1150 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 PAPLNO95428 1278 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 VNN2O95498 520 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 ATP5C1P36542 298 aaKnown RBP6.79□□□□□ -1.32
SNHG1-212ENST00000539975 EPHA5P54756 1037 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 NTHL1P78549 312 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 SPEM2Q0P670 501 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 MTMR3Q13615 1198 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 TEAD2Q15562 447 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 CCDC142Q17RM4 750 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 EFHC1Q5JVL4 640 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 C16orf46Q6P387 395 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 PAQR9Q6ZVX9 377 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 DDX42Q86XP3 938 aaKnown RBP eCLIP6.79□□□□□ -1.327e-6■■■□□ 16.5
SNHG1-212ENST00000539975 ZDHHC17Q8IUH5 632 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 PASD1Q8IV76 773 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 ZDHHC14Q8IZN3 488 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 CMTM8Q8IZV2 173 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 GJD3Q8N144 294 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 BEND7Q8N7W2 519 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-212ENST00000539975 UBR7Q8N806 425 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 MAB21L3Q8N8X9 362 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 OR8K1Q8NGG5 319 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 SCAMP5Q8TAC9 235 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 ITFG1Q8TB96 612 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 ZSCAN18Q8TBC5 510 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-212ENST00000539975 SLC35F5Q8WV83 523 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 IRGQQ8WZA9 623 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 TFAP2BQ92481 460 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 SYN2Q92777 582 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-212ENST00000539975 SMARCD2Q92925 531 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 EXOC4Q96A65 974 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 IFT43Q96FT9 208 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 UHRF1Q96T88 793 aaPredicted RBP6.79□□□□□ -1.32
SNHG1-212ENST00000539975 SMOQ99835 787 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 CNGB3Q9NQW8 809 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 ABCC13Q9NSE7 274 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 OLA1Q9NTK5 396 aaKnown RBP6.79□□□□□ -1.32
SNHG1-212ENST00000539975 CAPN11Q9UMQ6 739 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 SCML2Q9UQR0 700 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 NME7Q9Y5B8 376 aa6.79□□□□□ -1.32
SNHG1-212ENST00000539975 KIAA1671Q9BY89 1806 aa6.78□□□□□ -1.32
SNHG1-212ENST00000539975 AKR1B15C9JRZ8 316 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-212ENST00000539975 PIK3R2O00459 728 aa6.78□□□□□ -1.32
SNHG1-212ENST00000539975 BEST1O76090 585 aa6.78□□□□□ -1.32
SNHG1-212ENST00000539975 IPO7O95373 1038 aaKnown RBP6.78□□□□□ -1.32
SNHG1-212ENST00000539975 SERPING1P05155 500 aa6.78□□□□□ -1.32
SNHG1-212ENST00000539975 PNMA6AP0CW24 399 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-212ENST00000539975 MBL2P11226 248 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-212ENST00000539975 HMGA1P17096 107 aaKnown RBP6.78□□□□□ -1.32
SNHG1-212ENST00000539975 GJA1P17302 382 aa6.78□□□□□ -1.32
SNHG1-212ENST00000539975 CEBPBP17676 345 aa6.78□□□□□ -1.32
SNHG1-212ENST00000539975 CASP14P31944 242 aa6.78□□□□□ -1.32
SNHG1-212ENST00000539975 GPD2P43304 727 aa6.78□□□□□ -1.32
SNHG1-212ENST00000539975 RGS7P49802 495 aa6.78□□□□□ -1.32
SNHG1-212ENST00000539975 TUBP50607 506 aa6.78□□□□□ -1.32
SNHG1-212ENST00000539975 ARSDP51689 593 aa6.78□□□□□ -1.32
SNHG1-212ENST00000539975 KPNA1P52294 538 aaPredicted RBP6.78□□□□□ -1.32
SNHG1-212ENST00000539975 KIF11P52732 1056 aa6.78□□□□□ -1.32
SNHG1-212ENST00000539975 CACNA2D1P54289 1103 aa6.78□□□□□ -1.32
SNHG1-212ENST00000539975 JAM2P57087 298 aa6.78□□□□□ -1.32
SNHG1-212ENST00000539975 YWHAGP61981 247 aaKnown RBP eCLIP6.78□□□□□ -1.32
SNHG1-212ENST00000539975 COG7P83436 770 aa6.78□□□□□ -1.32
SNHG1-212ENST00000539975 CYP4F8P98187 520 aa6.78□□□□□ -1.32
SNHG1-212ENST00000539975 AMPD2Q01433 879 aa6.78□□□□□ -1.32
SNHG1-212ENST00000539975 PFKPQ01813 784 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms