RNA–Protein interactions for RNA: ENST00000539935.6

CACNB4-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 8,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-210ENST00000539935 ZNF543Q08ER8 600 aa13.17□□□□□ -0.3
CACNB4-210ENST00000539935 TPCN2Q8NHX9 752 aa13.17□□□□□ -0.3
CACNB4-210ENST00000539935 MTMR4Q9NYA4 1195 aa13.17□□□□□ -0.3
CACNB4-210ENST00000539935 ROBO2Q9HCK4 1378 aa13.17□□□□□ -0.3
CACNB4-210ENST00000539935 F5H5T6 163 aa13.17□□□□□ -0.3
CACNB4-210ENST00000539935 ALOX12P18054 663 aa13.17□□□□□ -0.3
CACNB4-210ENST00000539935 TSNQ15631 228 aaKnown RBP13.17□□□□□ -0.3
CACNB4-210ENST00000539935 MGAT4AQ9UM21 535 aa13.17□□□□□ -0.3
CACNB4-210ENST00000539935 CCDC162PA2VCL2 907 aa13.17□□□□□ -0.3
CACNB4-210ENST00000539935 PRR23AA6NEV1 266 aa13.17□□□□□ -0.3
CACNB4-210ENST00000539935 KPNA4O00629 521 aaPredicted RBP13.17□□□□□ -0.3
CACNB4-210ENST00000539935 SPANXN2Q5MJ10 180 aa13.17□□□□□ -0.3
CACNB4-210ENST00000539935 PHACTR4Q8IZ21 702 aa13.17□□□□□ -0.3
CACNB4-210ENST00000539935 BDH2Q9BUT1 245 aa13.17□□□□□ -0.3
CACNB4-210ENST00000539935 MICAL3Q7RTP6 2002 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 MYMKA6NI61 221 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 CYP7B1O75881 506 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 CNPP09543 421 aaKnown RBP13.16□□□□□ -0.3
CACNB4-210ENST00000539935 EFR3AQ14156 821 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 OASLQ15646 514 aaKnown RBP13.16□□□□□ -0.3
CACNB4-210ENST00000539935 ACAD10Q6JQN1 1059 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 CCDC185Q8N715 623 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 KCNB2Q92953 911 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 MIEF2Q96C03 454 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 KCTD14Q9BQ13 255 aaPredicted RBP13.16□□□□□ -0.3
CACNB4-210ENST00000539935 PHF20Q9BVI0 1012 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 KLHL28Q9NXS3 571 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 CPT1AP50416 773 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 BAATQ14032 418 aaPredicted RBP13.16□□□□□ -0.3
CACNB4-210ENST00000539935 ZBTB49Q6ZSB9 765 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 DENND5BQ6ZUT9 1274 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 SLC22A9Q8IVM8 553 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 CELF1Q92879 486 aaKnown RBP13.16□□□□□ -0.3
CACNB4-210ENST00000539935 ADGRE3Q9BY15 652 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 RNF181Q9P0P0 153 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 SH3BP4Q9P0V3 963 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 DRG1Q9Y295 367 aaKnown RBP13.16□□□□□ -0.3
CACNB4-210ENST00000539935 M0QYT0 321 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 CRTAMO95727 393 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 BCL10O95999 233 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 RBP1P09455 135 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 GJA1P17302 382 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 TAF6P49848 677 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 SCRN3Q0VDG4 424 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 TSGA10IPQ3SY00 556 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 ZNF671Q8TAW3 534 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 MAML3Q96JK9 1138 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 TMEM79Q9BSE2 394 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 BTBD3Q9Y2F9 522 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 ADGRB3O60242 1522 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 PNMA8CA0A1B0GUJ8 204 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 RRN3P2A6NIE6 340 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 TMEM114B3SHH9 223 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 GAS2O43903 313 aaKnown RBP13.16□□□□□ -0.3
CACNB4-210ENST00000539935 TCEA3O75764 348 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 BAIAP3O94812 1187 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 PCNAP12004 261 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 HNRNPH1P31943 449 aaKnown RBP13.16□□□□□ -0.3
CACNB4-210ENST00000539935 CCZ1BP86790 482 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 CCZ1P86791 482 aaPredicted RBP13.16□□□□□ -0.3
CACNB4-210ENST00000539935 OVGP1Q12889 678 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 PDK2Q15119 407 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 ZC2HC1CQ53FD0 456 aaPredicted RBP13.16□□□□□ -0.3
CACNB4-210ENST00000539935 SMNDC1O75940 238 aaKnown RBP eCLIP13.16□□□□□ -0.3
CACNB4-210ENST00000539935 PABPC1P11940 636 aaKnown RBP13.16□□□□□ -0.3
CACNB4-210ENST00000539935 STAT5AP42229 794 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 SNAPC2Q13487 334 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 ELOA2Q8IYF1 753 aaPredicted RBP13.16□□□□□ -0.3
CACNB4-210ENST00000539935 PJA1Q8NG27 643 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 TRPC4APQ8TEL6 797 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 SLC20A1Q8WUM9 679 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 A0A0X1KG70 313 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 HBP1O60381 514 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 PARNO95453 639 aaKnown RBP13.16□□□□□ -0.3
CACNB4-210ENST00000539935 C4orf46Q504U0 113 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 AP1S3Q96PC3 154 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 PPP1R10Q96QC0 940 aaKnown RBP13.16□□□□□ -0.3
CACNB4-210ENST00000539935 SPEF1Q9Y4P9 236 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 E9PCH4 1651 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 SNAP23O00161 211 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 WWP2O00308 870 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 ITGA9Q13797 1035 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 EPHA10Q5JZY3 1008 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 KDM7AQ6ZMT4 941 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 PI4K2AQ9BTU6 479 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 ATPIF1Q9UII2 106 aa13.16□□□□□ -0.3
CACNB4-210ENST00000539935 C1orf232A0A0U1RR37 186 aa13.15□□□□□ -0.3
CACNB4-210ENST00000539935 TM9SF1O15321 606 aa13.15□□□□□ -0.3
CACNB4-210ENST00000539935 PLA2G6O60733 806 aa13.15□□□□□ -0.3
CACNB4-210ENST00000539935 RXRGP48443 463 aa13.15□□□□□ -0.3
CACNB4-210ENST00000539935 TOMM20Q15388 145 aa13.15□□□□□ -0.3
CACNB4-210ENST00000539935 SP8Q8IXZ3 490 aa13.15□□□□□ -0.3
CACNB4-210ENST00000539935 SYTL1Q8IYJ3 562 aa13.15□□□□□ -0.3
CACNB4-210ENST00000539935 EID3Q8N140 333 aa13.15□□□□□ -0.3
CACNB4-210ENST00000539935 SAMD3Q8N6K7 520 aa13.15□□□□□ -0.3
CACNB4-210ENST00000539935 PARK7Q99497 189 aaKnown RBP13.15□□□□□ -0.3
CACNB4-210ENST00000539935 GYPCP04921 128 aa13.15□□□□□ -0.3
CACNB4-210ENST00000539935 IGKV5-2P06315 115 aa13.15□□□□□ -0.3
CACNB4-210ENST00000539935 GRK4P32298 578 aa13.15□□□□□ -0.3
CACNB4-210ENST00000539935 KCNT1Q5JUK3 1230 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms