RNA–Protein interactions for RNA: ENST00000539925.5

LTBR-207, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBR, Length 1,665 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-207ENST00000539925 LRRTM3Q86VH5 581 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 FAM131BQ86XD5 332 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 LRRC43Q8N309 656 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 CCDC185Q8N715 623 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 RBM15Q96T37 977 aaKnown RBP eCLIP17.8■□□□□ 0.44
LTBR-207ENST00000539925 RAB6CQ9H0N0 254 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 FBXO44Q9H4M3 255 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 ABCC13Q9NSE7 274 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 SAE1Q9UBE0 346 aaPredicted RBP17.8■□□□□ 0.44
LTBR-207ENST00000539925 FBXW11Q9UKB1 542 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 PRG3Q9Y2Y8 225 aaPredicted RBP17.8■□□□□ 0.44
LTBR-207ENST00000539925 PCDHB5Q9Y5E4 795 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 FYNP06241 537 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 TSHRP16473 764 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 HTR7P34969 479 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 RPL22P35268 128 aaKnown RBP17.8■□□□□ 0.44
LTBR-207ENST00000539925 GRIK1P39086 918 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 CTCFP49711 727 aaPredicted RBP17.8■□□□□ 0.44
LTBR-207ENST00000539925 ARL4CP56559 192 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 CBLBQ13191 982 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 SLC45A4Q5BKX6 768 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 OTUD1Q5VV17 481 aaPredicted RBP17.8■□□□□ 0.44
LTBR-207ENST00000539925 SYPL2Q5VXT5 272 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 BSPRYQ5W0U4 402 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 C1orf228Q6PIY5 440 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 KDM7AQ6ZMT4 941 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 GPRIN1Q7Z2K8 1008 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 ANKLE1Q8NAG6 615 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 RNF139Q8WU17 664 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 C2orf15Q8WU43 125 aaKnown RBP17.8■□□□□ 0.44
LTBR-207ENST00000539925 TMLHEQ9NVH6 421 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 COMMD8Q9NX08 183 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 CWC15Q9P013 229 aaKnown RBP17.8■□□□□ 0.44
LTBR-207ENST00000539925 NAALADL1Q9UQQ1 740 aa17.8■□□□□ 0.44
LTBR-207ENST00000539925 FARP1Q9Y4F1 1045 aaPredicted RBP17.8■□□□□ 0.44
LTBR-207ENST00000539925 FGFR3P22607 806 aa17.79■□□□□ 0.44
LTBR-207ENST00000539925 CHKAP35790 457 aa17.79■□□□□ 0.44
LTBR-207ENST00000539925 CACNA2D1P54289 1103 aa17.79■□□□□ 0.44
LTBR-207ENST00000539925 NME3Q13232 169 aa17.79■□□□□ 0.44
LTBR-207ENST00000539925 STAT4Q14765 748 aa17.79■□□□□ 0.44
LTBR-207ENST00000539925 VARS2Q5ST30 1063 aaKnown RBP17.79■□□□□ 0.44
LTBR-207ENST00000539925 MFSD5Q6N075 450 aa17.79■□□□□ 0.44
LTBR-207ENST00000539925 BHLHA9Q7RTU4 235 aa17.79■□□□□ 0.44
LTBR-207ENST00000539925 UNC45BQ8IWX7 931 aa17.79■□□□□ 0.44
LTBR-207ENST00000539925 CRIPAKQ8N1N5 446 aa17.79■□□□□ 0.44
LTBR-207ENST00000539925 FAM71DQ8N9W8 422 aa17.79■□□□□ 0.44
LTBR-207ENST00000539925 SERPINB12Q96P63 405 aa17.79■□□□□ 0.44
LTBR-207ENST00000539925 BRD8Q9H0E9 1235 aa17.79■□□□□ 0.44
LTBR-207ENST00000539925 TMEM30AQ9NV96 361 aa17.79■□□□□ 0.44
LTBR-207ENST00000539925 DDIT4Q9NX09 232 aa17.79■□□□□ 0.44
LTBR-207ENST00000539925 HEY1Q9Y5J3 304 aa17.79■□□□□ 0.44
LTBR-207ENST00000539925 RASGRF2O14827 1237 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 CHADO15335 359 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 NCAM2O15394 837 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 B4GALT3O60512 393 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 STK10O94804 968 aaKnown RBP17.78■□□□□ 0.44
LTBR-207ENST00000539925 AGTP01019 485 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 ZSCAN5DPP0CG00 497 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 NR1D1P20393 614 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 MAGEA4P43358 317 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 CXCR3P49682 368 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 PDK1Q15118 436 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 HIF1AQ16665 826 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 CTXN3Q4LDR2 81 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 SLC39A12Q504Y0 691 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 BRMS1LQ5PSV4 323 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 HFE2Q6ZVN8 426 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 ANKS3Q6ZW76 656 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 ZC3H18Q86VM9 953 aaKnown RBP17.78■□□□□ 0.44
LTBR-207ENST00000539925 GLIS1Q8NBF1 620 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 OR2W6PQ8NHA6 318 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 NDRG1Q92597 394 aaKnown RBP17.78■□□□□ 0.44
LTBR-207ENST00000539925 PRCCQ92733 491 aaPredicted RBP17.78■□□□□ 0.44
LTBR-207ENST00000539925 CEP295NLQ96MC4 621 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 EPAS1Q99814 870 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 ADAM33Q9BZ11 813 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 KLC2Q9H0B6 622 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 USP29Q9HBJ7 922 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 WDR6Q9NNW5 1121 aaKnown RBP17.78■□□□□ 0.44
LTBR-207ENST00000539925 PIGVQ9NUD9 493 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 WBP1LQ9NX94 342 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.78■□□□□ 0.442e-10■□□□□ 8.8
LTBR-207ENST00000539925 DNAJB4Q9UDY4 337 aa17.78■□□□□ 0.44
LTBR-207ENST00000539925 TNFRSF10BO14763 440 aa17.77■□□□□ 0.44
LTBR-207ENST00000539925 ALOX15BO15296 676 aa17.77■□□□□ 0.44
LTBR-207ENST00000539925 RGS16O15492 202 aaPredicted RBP17.77■□□□□ 0.44
LTBR-207ENST00000539925 SLC5A3P53794 718 aa17.77■□□□□ 0.44
LTBR-207ENST00000539925 ATXN1P54253 815 aaKnown RBP17.77■□□□□ 0.44
LTBR-207ENST00000539925 IKBKEQ14164 716 aa17.77■□□□□ 0.44
LTBR-207ENST00000539925 FAM171A1Q5VUB5 890 aa17.77■□□□□ 0.44
LTBR-207ENST00000539925 CNKSR3Q6P9H4 555 aa17.77■□□□□ 0.44
LTBR-207ENST00000539925 NPNTQ6UXI9 565 aa17.77■□□□□ 0.44
LTBR-207ENST00000539925 PDIK1LQ8N165 341 aa17.77■□□□□ 0.44
LTBR-207ENST00000539925 RIBC1Q8N443 379 aaPredicted RBP17.77■□□□□ 0.44
LTBR-207ENST00000539925 NAT8LQ8N9F0 302 aa17.77■□□□□ 0.44
LTBR-207ENST00000539925 SPPL2BQ8TCT7 592 aa17.77■□□□□ 0.44
LTBR-207ENST00000539925 QKIQ96PU8 341 aaKnown RBP eCLIP17.77■□□□□ 0.445e-17■■■■■ 95.5
LTBR-207ENST00000539925 TMEM209Q96SK2 561 aa17.77■□□□□ 0.44
LTBR-207ENST00000539925 CENPHQ9H3R5 247 aa17.77■□□□□ 0.44
LTBR-207ENST00000539925 WDCPQ9H6R7 721 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms