RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 DUOXA1Q1HG43 343 aa16.05■□□□□ 0.16
UBE3B-211ENST00000539843 SGO2Q562F6 1265 aa16.05■□□□□ 0.16
UBE3B-211ENST00000539843 SYCP2LQ5T4T6 812 aa16.05■□□□□ 0.16
UBE3B-211ENST00000539843 PIGZQ86VD9 579 aa16.05■□□□□ 0.16
UBE3B-211ENST00000539843 SMYD4Q8IYR2 804 aaPredicted RBP16.05■□□□□ 0.16
UBE3B-211ENST00000539843 SIX6OS1Q8N1H7 587 aa16.05■□□□□ 0.16
UBE3B-211ENST00000539843 ANKRD52Q8NB46 1076 aa16.05■□□□□ 0.16
UBE3B-211ENST00000539843 IPO4Q8TEX9 1081 aaKnown RBP16.05■□□□□ 0.16
UBE3B-211ENST00000539843 WBP2Q969T9 261 aa16.05■□□□□ 0.16
UBE3B-211ENST00000539843 PLD4Q96BZ4 506 aa16.05■□□□□ 0.16
UBE3B-211ENST00000539843 GDPD2Q9HCC8 539 aa16.05■□□□□ 0.16
UBE3B-211ENST00000539843 METTL14Q9HCE5 456 aaKnown RBP16.05■□□□□ 0.16
UBE3B-211ENST00000539843 MARCH2Q9P0N8 246 aa16.05■□□□□ 0.16
UBE3B-211ENST00000539843 SUSD2Q9UGT4 822 aa16.05■□□□□ 0.16
UBE3B-211ENST00000539843 ARMCX3Q9UH62 379 aaPredicted RBP16.05■□□□□ 0.16
UBE3B-211ENST00000539843 TPRP12270 2363 aaKnown RBP16.05■□□□□ 0.16
UBE3B-211ENST00000539843 MYH10P35580 1976 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 EML5Q05BV3 1969 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 ANTXRLA6NF34 631 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 PSMA7O14818 248 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 SYNCRIPO60506 623 aaKnown RBP16.04■□□□□ 0.16
UBE3B-211ENST00000539843 GREM1O60565 184 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 ZBED1O96006 694 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 HMBSP08397 361 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 CEACAM1P13688 526 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 CSRP1P21291 193 aaKnown RBP16.04■□□□□ 0.16
UBE3B-211ENST00000539843 PTGER3P43115 390 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 MAPK8P45983 427 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 HARS2P49590 506 aaKnown RBP16.04■□□□□ 0.16
UBE3B-211ENST00000539843 TKTL1P51854 596 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 ZNF445P59923 1031 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 IRX4P78413 519 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 NUCB2P80303 420 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 SHC2P98077 582 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 ZNF252P-AS1Q0IIN9 211 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 BST2Q10589 180 aaKnown RBP16.04■□□□□ 0.16
UBE3B-211ENST00000539843 CUL2Q13617 745 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 GOLGA7BQ2TAP0 167 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 COBLL1Q53SF7 1204 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 SH3PXD2AQ5TCZ1 1133 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 SLC23A3Q6PIS1 610 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 KIAA1324Q6UXG2 1013 aaKnown RBP16.04■□□□□ 0.16
UBE3B-211ENST00000539843 Q6ZNB5 142 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 ANKS1BQ7Z6G8 1248 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 SCD5Q86SK9 330 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 SLC4A11Q8NBS3 891 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 FOXJ1Q92949 421 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 EEF2KMTQ96G04 330 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 GABRG3Q99928 467 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 PLK2Q9NYY3 685 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 KIAA1257Q9ULG3 409 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 SLC6A14Q9UN76 642 aa16.04■□□□□ 0.16
UBE3B-211ENST00000539843 ACACBO00763 2458 aa16.03■□□□□ 0.16
UBE3B-211ENST00000539843 SLC12A8A0AV02 714 aa16.03■□□□□ 0.16
UBE3B-211ENST00000539843 PATE3B3GLJ2 98 aa16.03■□□□□ 0.16
UBE3B-211ENST00000539843 XPO1O14980 1071 aaKnown RBP16.03■□□□□ 0.16
UBE3B-211ENST00000539843 TRIM24O15164 1050 aa16.03■□□□□ 0.16
UBE3B-211ENST00000539843 SYPP08247 313 aa16.03■□□□□ 0.16
UBE3B-211ENST00000539843 GNSP15586 552 aa16.03■□□□□ 0.16
UBE3B-211ENST00000539843 RDXP35241 583 aaKnown RBP16.03■□□□□ 0.16
UBE3B-211ENST00000539843 PRCPP42785 496 aa16.03■□□□□ 0.16
UBE3B-211ENST00000539843 RAD23BP54727 409 aa16.03■□□□□ 0.16
UBE3B-211ENST00000539843 ZNF33AQ06730 810 aa16.03■□□□□ 0.16
UBE3B-211ENST00000539843 EIF4HQ15056 248 aaKnown RBP16.03■□□□□ 0.16
UBE3B-211ENST00000539843 WDR45BQ5MNZ6 344 aa16.03■□□□□ 0.16
UBE3B-211ENST00000539843 TOGARAM2Q6ZUX3 1019 aa16.03■□□□□ 0.16
UBE3B-211ENST00000539843 RGL4Q8IZJ4 473 aa16.03■□□□□ 0.16
UBE3B-211ENST00000539843 DDI1Q8WTU0 396 aa16.03■□□□□ 0.16
UBE3B-211ENST00000539843 GOLGA1Q92805 767 aa16.03■□□□□ 0.16
UBE3B-211ENST00000539843 SEMA4DQ92854 862 aa16.03■□□□□ 0.16
UBE3B-211ENST00000539843 CACNA2D2Q9NY47 1150 aa16.03■□□□□ 0.16
UBE3B-211ENST00000539843 MBD1Q9UIS9 605 aaPredicted RBP16.03■□□□□ 0.16
UBE3B-211ENST00000539843 TSPAN16Q9UKR8 245 aa16.03■□□□□ 0.16
UBE3B-211ENST00000539843 CYP8B1Q9UNU6 501 aa16.03■□□□□ 0.16
UBE3B-211ENST00000539843 SLC27A6Q9Y2P4 619 aa16.03■□□□□ 0.16
UBE3B-211ENST00000539843 ATXN2Q99700 1313 aaKnown RBP16.02■□□□□ 0.16
UBE3B-211ENST00000539843 A0A1W2PQF6 199 aa16.02■□□□□ 0.16
UBE3B-211ENST00000539843 PRRT4C9JH25 899 aa16.02■□□□□ 0.16
UBE3B-211ENST00000539843 PENKP01210 267 aaPredicted RBP16.02■□□□□ 0.16
UBE3B-211ENST00000539843 SETSIPP0DME0 302 aa16.02■□□□□ 0.16
UBE3B-211ENST00000539843 CHRM1P11229 460 aaPredicted RBP16.02■□□□□ 0.16
UBE3B-211ENST00000539843 ENGP17813 658 aa16.02■□□□□ 0.16
UBE3B-211ENST00000539843 NDUFV2P19404 249 aa16.02■□□□□ 0.16
UBE3B-211ENST00000539843 ITPKAP23677 461 aa16.02■□□□□ 0.16
UBE3B-211ENST00000539843 MCCD1P59942 119 aaPredicted RBP16.02■□□□□ 0.16
UBE3B-211ENST00000539843 CCDC40Q4G0X9 1142 aa16.02■□□□□ 0.16
UBE3B-211ENST00000539843 RAB41Q5JT25 222 aa16.02■□□□□ 0.16
UBE3B-211ENST00000539843 DENND1CQ8IV53 801 aa16.02■□□□□ 0.16
UBE3B-211ENST00000539843 CPXM2Q8N436 756 aa16.02■□□□□ 0.16
UBE3B-211ENST00000539843 GTPBP2Q9BX10 602 aaKnown RBP16.02■□□□□ 0.16
UBE3B-211ENST00000539843 SLC2A11Q9BYW1 496 aa16.02■□□□□ 0.16
UBE3B-211ENST00000539843 PILRBQ9UKJ0 227 aa16.02■□□□□ 0.16
UBE3B-211ENST00000539843 CNOT1A5YKK6 2376 aaKnown RBP16.02■□□□□ 0.15
UBE3B-211ENST00000539843 THADAQ6YHU6 1953 aa16.02■□□□□ 0.15
UBE3B-211ENST00000539843 IGHV1OR15-9A0A0B4J2B8 117 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 TIMM44O43615 452 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 OPHN1O60890 802 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 SERPINF2P08697 491 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 CISD3P0C7P0 127 aa16.01■□□□□ 0.15
UBE3B-211ENST00000539843 ACADMP11310 421 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms