RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 ZNF487B1APH4 448 aa23.31■■□□□ 1.32
HOMER3-204ENST00000539827 NUDT17P0C025 328 aa23.31■■□□□ 1.32
HOMER3-204ENST00000539827 PBX3P40426 434 aa23.31■■□□□ 1.32
HOMER3-204ENST00000539827 SKIDA1Q1XH10 827 aa23.31■■□□□ 1.32
HOMER3-204ENST00000539827 IRGQQ8WZA9 623 aa23.31■■□□□ 1.32
HOMER3-204ENST00000539827 BCCIPQ9P287 314 aaKnown RBP eCLIP23.31■■□□□ 1.32
HOMER3-204ENST00000539827 MFHAS1Q9Y4C4 1052 aa23.31■■□□□ 1.32
HOMER3-204ENST00000539827 TTC3P53804 2025 aa23.31■■□□□ 1.32
HOMER3-204ENST00000539827 TANC1Q9C0D5 1861 aa23.31■■□□□ 1.32
HOMER3-204ENST00000539827 KRT71Q3SY84 523 aa23.31■■□□□ 1.32
HOMER3-204ENST00000539827 RNASEH2BQ5TBB1 312 aaKnown RBP23.31■■□□□ 1.32
HOMER3-204ENST00000539827 BSPRYQ5W0U4 402 aa23.31■■□□□ 1.32
HOMER3-204ENST00000539827 TRMT10CQ7L0Y3 403 aaKnown RBP23.31■■□□□ 1.32
HOMER3-204ENST00000539827 CRIPAKQ8N1N5 446 aa23.31■■□□□ 1.32
HOMER3-204ENST00000539827 ATP6V1G3Q96LB4 118 aa23.31■■□□□ 1.32
HOMER3-204ENST00000539827 CRISPLD2Q9H0B8 497 aa23.31■■□□□ 1.32
HOMER3-204ENST00000539827 ETNK2Q9NVF9 386 aa23.31■■□□□ 1.32
HOMER3-204ENST00000539827 USP3Q9Y6I4 520 aa23.31■■□□□ 1.32
HOMER3-204ENST00000539827 VWA8A3KMH1 1905 aa23.3■■□□□ 1.32
HOMER3-204ENST00000539827 SYN3O14994 580 aa23.3■■□□□ 1.32
HOMER3-204ENST00000539827 ARL4AP40617 200 aa23.3■■□□□ 1.32
HOMER3-204ENST00000539827 EIF3BP55884 814 aaKnown RBP23.3■■□□□ 1.32
HOMER3-204ENST00000539827 GBE1Q04446 702 aa23.3■■□□□ 1.32
HOMER3-204ENST00000539827 CTXN3Q4LDR2 81 aa23.3■■□□□ 1.32
HOMER3-204ENST00000539827 ZCCHC9Q8N567 271 aaKnown RBP23.3■■□□□ 1.32
HOMER3-204ENST00000539827 CCDC33Q8N5R6 958 aa23.3■■□□□ 1.32
HOMER3-204ENST00000539827 TSPYL1Q9H0U9 437 aa23.3■■□□□ 1.32
HOMER3-204ENST00000539827 WDR6Q9NNW5 1121 aaKnown RBP23.3■■□□□ 1.32
HOMER3-204ENST00000539827 PNPLA8Q9NP80 782 aa23.3■■□□□ 1.32
HOMER3-204ENST00000539827 DDIT4Q9NX09 232 aa23.3■■□□□ 1.32
HOMER3-204ENST00000539827 ATP11BQ9Y2G3 1177 aa23.3■■□□□ 1.32
HOMER3-204ENST00000539827 HOXA2O43364 376 aa23.29■■□□□ 1.32
HOMER3-204ENST00000539827 ACSL3O95573 720 aa23.29■■□□□ 1.32
HOMER3-204ENST00000539827 CTCFP49711 727 aaPredicted RBP23.29■■□□□ 1.32
HOMER3-204ENST00000539827 SLC5A3P53794 718 aa23.29■■□□□ 1.32
HOMER3-204ENST00000539827 SLC10A2Q12908 348 aaPredicted RBP23.29■■□□□ 1.32
HOMER3-204ENST00000539827 DNAJC21Q5F1R6 531 aaKnown RBP23.29■■□□□ 1.32
HOMER3-204ENST00000539827 SDHAF4Q5VUM1 108 aa23.29■■□□□ 1.32
HOMER3-204ENST00000539827 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.29■■□□□ 1.32
HOMER3-204ENST00000539827 STKLD1Q8NE28 680 aa23.29■■□□□ 1.32
HOMER3-204ENST00000539827 PGLYRP2Q96PD5 576 aa23.29■■□□□ 1.32
HOMER3-204ENST00000539827 ANLNQ9NQW6 1124 aa23.29■■□□□ 1.32
HOMER3-204ENST00000539827 CREB3O43889 395 aa23.29■■□□□ 1.32
HOMER3-204ENST00000539827 UPP2O95045 317 aa23.29■■□□□ 1.32
HOMER3-204ENST00000539827 RBL1P28749 1068 aa23.29■■□□□ 1.32
HOMER3-204ENST00000539827 GPR15P49685 360 aa23.29■■□□□ 1.32
HOMER3-204ENST00000539827 MORF4L2Q15014 288 aa23.29■■□□□ 1.32
HOMER3-204ENST00000539827 KYNUQ16719 465 aa23.29■■□□□ 1.32
HOMER3-204ENST00000539827 EFHC2Q5JST6 749 aa23.29■■□□□ 1.32
HOMER3-204ENST00000539827 PSTKQ8IV42 348 aaKnown RBP23.29■■□□□ 1.32
HOMER3-204ENST00000539827 EXOC4Q96A65 974 aa23.29■■□□□ 1.32
HOMER3-204ENST00000539827 USP29Q9HBJ7 922 aa23.29■■□□□ 1.32
HOMER3-204ENST00000539827 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.29■■□□□ 1.32
HOMER3-204ENST00000539827 NINJ2Q9NZG7 142 aa23.29■■□□□ 1.32
HOMER3-204ENST00000539827 TNFRSF10BO14763 440 aa23.28■■□□□ 1.32
HOMER3-204ENST00000539827 KCNN4O15554 427 aa23.28■■□□□ 1.32
HOMER3-204ENST00000539827 GALTP07902 379 aa23.28■■□□□ 1.32
HOMER3-204ENST00000539827 ZFXP17010 805 aaPredicted RBP23.28■■□□□ 1.32
HOMER3-204ENST00000539827 STIP1P31948 543 aaKnown RBP23.28■■□□□ 1.32
HOMER3-204ENST00000539827 ADRA1BP35368 520 aa23.28■■□□□ 1.32
HOMER3-204ENST00000539827 ARPP19P56211 112 aa23.28■■□□□ 1.32
HOMER3-204ENST00000539827 ANKRD22Q5VYY1 191 aa23.28■■□□□ 1.32
HOMER3-204ENST00000539827 NCBP2-AS2Q69YL0 99 aa23.28■■□□□ 1.32
HOMER3-204ENST00000539827 SCML4Q8N228 414 aa23.28■■□□□ 1.32
HOMER3-204ENST00000539827 RNF139Q8WU17 664 aa23.28■■□□□ 1.32
HOMER3-204ENST00000539827 TOX2Q96NM4 488 aa23.28■■□□□ 1.32
HOMER3-204ENST00000539827 H3BRJ5 948 aa23.27■■□□□ 1.32
HOMER3-204ENST00000539827 GOLGA8MH3BSY2 632 aa23.27■■□□□ 1.32
HOMER3-204ENST00000539827 AMHP03971 560 aa23.27■■□□□ 1.32
HOMER3-204ENST00000539827 FUT10Q6P4F1 479 aa23.27■■□□□ 1.32
HOMER3-204ENST00000539827 TAC4Q86UU9 113 aa23.27■■□□□ 1.32
HOMER3-204ENST00000539827 CPT1BQ92523 772 aa23.27■■□□□ 1.32
HOMER3-204ENST00000539827 PRCCQ92733 491 aaPredicted RBP23.27■■□□□ 1.32
HOMER3-204ENST00000539827 RBM15Q96T37 977 aaKnown RBP eCLIP23.27■■□□□ 1.32
HOMER3-204ENST00000539827 FOXP3Q9BZS1 431 aa23.27■■□□□ 1.32
HOMER3-204ENST00000539827 SAYSD1Q9NPB0 183 aa23.27■■□□□ 1.32
HOMER3-204ENST00000539827 RRN3Q9NYV6 651 aa23.27■■□□□ 1.32
HOMER3-204ENST00000539827 FBXW11Q9UKB1 542 aa23.27■■□□□ 1.32
HOMER3-204ENST00000539827 FARP1Q9Y4F1 1045 aaPredicted RBP23.27■■□□□ 1.32
HOMER3-204ENST00000539827 PATJQ8NI35 1801 aa23.27■■□□□ 1.32
HOMER3-204ENST00000539827 TLDC2A0PJX2 215 aa23.27■■□□□ 1.32
HOMER3-204ENST00000539827 SMIM23A6NLE4 172 aa23.27■■□□□ 1.32
HOMER3-204ENST00000539827 HMGB1P1B2RPK0 211 aaPredicted RBP23.27■■□□□ 1.32
HOMER3-204ENST00000539827 MRPL58Q14197 206 aaKnown RBP23.27■■□□□ 1.32
HOMER3-204ENST00000539827 DDR2Q16832 855 aa23.27■■□□□ 1.32
HOMER3-204ENST00000539827 PCGF5Q86SE9 256 aa23.27■■□□□ 1.32
HOMER3-204ENST00000539827 TMEM173Q86WV6 379 aaPredicted RBP23.27■■□□□ 1.32
HOMER3-204ENST00000539827 PGAP3Q96FM1 320 aaPredicted RBP23.27■■□□□ 1.32
HOMER3-204ENST00000539827 C9orf72Q96LT7 481 aa23.27■■□□□ 1.32
HOMER3-204ENST00000539827 SLC9A7Q96T83 725 aa23.27■■□□□ 1.32
HOMER3-204ENST00000539827 MRPL9Q9BYD2 267 aaKnown RBP23.27■■□□□ 1.32
HOMER3-204ENST00000539827 ARHGEF4Q9NR80 690 aa23.27■■□□□ 1.32
HOMER3-204ENST00000539827 ZNF638Q14966 1978 aaKnown RBP23.26■■□□□ 1.31
HOMER3-204ENST00000539827 I6L893 689 aaPredicted RBP23.26■■□□□ 1.31
HOMER3-204ENST00000539827 TTC4O95801 387 aa23.26■■□□□ 1.31
HOMER3-204ENST00000539827 FGFR3P22607 806 aa23.26■■□□□ 1.31
HOMER3-204ENST00000539827 PGFP49763 221 aa23.26■■□□□ 1.31
HOMER3-204ENST00000539827 YWHAGP61981 247 aaKnown RBP eCLIP23.26■■□□□ 1.31
HOMER3-204ENST00000539827 GAD2Q05329 585 aa23.26■■□□□ 1.31
HOMER3-204ENST00000539827 NFE2Q16621 373 aaPredicted RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 246.9 ms