RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 C3orf20Q8ND61 904 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 MOSPD2Q8NHP6 518 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 GDAP1Q8TB36 358 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 UTP15Q8TED0 518 aaKnown RBP4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 TSPEARQ8WU66 669 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 NRG4Q8WWG1 115 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 SDCCAG3Q96C92 435 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 NEIL1Q96FI4 390 aaPredicted RBP4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 RBM18Q96H35 190 aaKnown RBP4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 SUCLG2Q96I99 432 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 HIST1H2AHQ96KK5 128 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 CCDC43Q96MW1 224 aaKnown RBP4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 COG8Q96MW5 612 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 TWNKQ96RR1 684 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 HIST1H2AJQ99878 128 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 GDF15Q99988 308 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 DDX23Q9BUQ8 820 aaKnown RBP4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 RABEP2Q9H5N1 569 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 ERVMER34-1Q9H9K5 563 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 ERVK-5Q9HDB9 667 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 NECTIN3Q9NQS3 549 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 EIF2B3Q9NR50 452 aaKnown RBP4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 GJB4Q9NTQ9 266 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 PI4KBQ9UBF8 816 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 MORF4L1Q9UBU8 362 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 AFF4Q9UHB7 1163 aaKnown RBP4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 CTNNA3Q9UI47 895 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 MAN2B2Q9Y2E5 1009 aa4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 EPN1Q9Y6I3 576 aaPredicted RBP4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 EIF2AK4Q9P2K8 1649 aaKnown RBP4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 COL14A1Q05707 1796 aaKnown RBP4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 RBBP6Q7Z6E9 1792 aaKnown RBP4.12□□□□□ -1.75
AC055720.1-201ENST00000539552 SBF1O95248 1867 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 BRCA1P38398 1863 aaKnown RBP4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 A0A087X1B8 175 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 CCDC78A2IDD5 438 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 AGAP14A8MT82 685 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 DDX39AO00148 427 aaKnown RBP4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 PES1O00541 588 aaKnown RBP4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 CAPN9O14815 690 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 KIAA0355O15063 1070 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 PLSCR1O15162 318 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 SPTLC2O15270 562 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 THAP12O43422 761 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 BEST1O76090 585 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 USP1O94782 785 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 ENDOD1O94919 500 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 PCDH8O95206 1070 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 APBB3O95704 486 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 TK1P04183 234 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 NTRK1P04629 796 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 ANXA2P07355 339 aaKnown RBP4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 C8BP07358 591 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 MMEP08473 750 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 ITGA2BP08514 1039 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 KITP10721 976 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 ALAS1P13196 640 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 LAMP2P13473 410 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 JUPP14923 745 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 EN2P19622 333 aaPredicted RBP4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 MAPK4P31152 587 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 ARL3P36405 182 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 SLC6A11P48066 632 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 GPR15P49685 360 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 RCAN1P53805 252 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 EPHA5P54756 1037 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 INHBCP55103 352 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 SUMO3P55854 103 aaPredicted RBP4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 ACTR2P61160 394 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 DPTQ07507 201 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 COX10Q12887 443 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 LRMPQ12912 555 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 EPS8Q12929 822 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 NOGQ13253 232 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 MAMLD1Q13495 774 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 SEC23AQ15436 765 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 DUSP28Q4G0W2 176 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 RAB12Q6IQ22 244 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 FSTL4Q6MZW2 842 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 IRGCQ6NXR0 463 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 KLHL17Q6TDP4 642 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 CRTC1Q6UUV9 634 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 BTNL9Q6UXG8 535 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 CCBE1Q6UXH8 406 aaPredicted RBP4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 GADL1Q6ZQY3 521 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 SZRD1Q7Z422 152 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 R3HCC1LQ7Z5L2 792 aaKnown RBP4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 ARMC8Q8IUR7 673 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 LURAP1LQ8IV03 231 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 GLB1L2Q8IW92 636 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 THNSL1Q8IYQ7 743 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 ADSSL1Q8N142 457 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 DNERQ8NFT8 737 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 PLEKHO2Q8TD55 490 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 SH3RF2Q8TEC5 729 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 DENND1AQ8TEH3 1009 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 AFG1LQ8WV93 481 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 FAM120BQ96EK7 910 aaKnown RBP4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 SLC35A4Q96G79 324 aa4.11□□□□□ -1.75
AC055720.1-201ENST00000539552 CALML4Q96GE6 196 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms