RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 SCD5Q86SK9 330 aa16.04■□□□□ 0.16
VAMP1-207ENST00000539047 TAC4Q86UU9 113 aa16.04■□□□□ 0.16
VAMP1-207ENST00000539047 RASGEF1CQ8N431 466 aa16.04■□□□□ 0.16
VAMP1-207ENST00000539047 CDCA3Q99618 268 aaPredicted RBP16.04■□□□□ 0.16
VAMP1-207ENST00000539047 CARD6Q9BX69 1037 aa16.04■□□□□ 0.16
VAMP1-207ENST00000539047 TLE6Q9H808 572 aa16.04■□□□□ 0.16
VAMP1-207ENST00000539047 NMUR1Q9HB89 426 aa16.04■□□□□ 0.16
VAMP1-207ENST00000539047 TTC7AQ9ULT0 858 aaPredicted RBP16.04■□□□□ 0.16
VAMP1-207ENST00000539047 AP4E1Q9UPM8 1137 aa16.04■□□□□ 0.16
VAMP1-207ENST00000539047 IRAK2O43187 625 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 CLASP2O75122 1294 aaKnown RBP16.03■□□□□ 0.16
VAMP1-207ENST00000539047 APOEP02649 317 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 FGGP02679 453 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 HNRNPA1P09651 372 aaKnown RBP eCLIP16.03■□□□□ 0.16
VAMP1-207ENST00000539047 RARAP10276 462 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 PYGMP11217 842 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 CDC25CP30307 473 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 CCR1P32246 355 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 IRS1P35568 1242 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 TUBP50607 506 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 CDH6P55285 790 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 NNTQ13423 1086 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 TFDP3Q5H9I0 405 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 HECTD3Q5T447 861 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 DCAF12L1Q5VU92 463 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 DNAJB7Q7Z6W7 309 aaPredicted RBP16.03■□□□□ 0.16
VAMP1-207ENST00000539047 FAM131BQ86XD5 332 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 CREG2Q8IUH2 290 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 LEMD2Q8NC56 503 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 ADAM32Q8TC27 787 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.03■□□□□ 0.16
VAMP1-207ENST00000539047 NTAN1Q96AB6 310 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 RNF25Q96BH1 459 aaPredicted RBP16.03■□□□□ 0.16
VAMP1-207ENST00000539047 SNRNP25Q9BV90 132 aaKnown RBP16.03■□□□□ 0.16
VAMP1-207ENST00000539047 CALN1Q9BXU9 219 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 MAK16Q9BXY0 300 aaKnown RBP16.03■□□□□ 0.16
VAMP1-207ENST00000539047 WDCPQ9H6R7 721 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 ASAH2Q9NR71 780 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 PIGVQ9NUD9 493 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 KLHL11Q9NVR0 708 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.03■□□□□ 0.16
VAMP1-207ENST00000539047 MARCH2Q9P0N8 246 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 SLC12A6Q9UHW9 1150 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 RASAL2Q9UJF2 1139 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 DENND4CQ5VZ89 1909 aa16.03■□□□□ 0.16
VAMP1-207ENST00000539047 ANAPC1Q9H1A4 1944 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 CCDC188H7C350 402 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 KRIT1O00522 736 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 TLR5O60602 858 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 ZMYND10O75800 440 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 TJP3O95049 919 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 ZDHHC11BP0C7U3 371 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 TCF4P15884 667 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 HMGA1P17096 107 aaKnown RBP16.02■□□□□ 0.16
VAMP1-207ENST00000539047 TFE3P19532 575 aaPredicted RBP16.02■□□□□ 0.16
VAMP1-207ENST00000539047 IL1R2P27930 398 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 PTPN7P35236 360 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 ATP5C1P36542 298 aaKnown RBP16.02■□□□□ 0.16
VAMP1-207ENST00000539047 ARL4AP40617 200 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 ZNF135P52742 658 aaPredicted RBP16.02■□□□□ 0.16
VAMP1-207ENST00000539047 EFEMP1Q12805 493 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 PPP2R5EQ16537 467 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 LRIT3Q3SXY7 679 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 KCNT1Q5JUK3 1230 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 SNX30Q5VWJ9 437 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 SPOCD1Q6ZMY3 1216 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 Q7L0L9 218 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 VSIG1Q86XK7 387 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 ZNF276Q8N554 614 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 ARFGAP1Q8N6T3 406 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 MRPS31Q92665 395 aaKnown RBP16.02■□□□□ 0.16
VAMP1-207ENST00000539047 MS4A14Q96JA4 679 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 PEBP4Q96S96 227 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 DHX35Q9H5Z1 703 aaKnown RBP16.02■□□□□ 0.16
VAMP1-207ENST00000539047 ZDHHC7Q9NXF8 308 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 DNMT3LQ9UJW3 386 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 TLR6Q9Y2C9 796 aa16.02■□□□□ 0.16
VAMP1-207ENST00000539047 CLUHO75153 1309 aa16.01■□□□□ 0.15
VAMP1-207ENST00000539047 PI4K2BG5E9Z4 385 aa16.01■□□□□ 0.15
VAMP1-207ENST00000539047 H3BRJ5 948 aa16.01■□□□□ 0.15
VAMP1-207ENST00000539047 KDELR1P24390 212 aa16.01■□□□□ 0.15
VAMP1-207ENST00000539047 CXCR3P49682 368 aa16.01■□□□□ 0.15
VAMP1-207ENST00000539047 TBX4P57082 545 aa16.01■□□□□ 0.15
VAMP1-207ENST00000539047 ITIH3Q06033 890 aa16.01■□□□□ 0.15
VAMP1-207ENST00000539047 CAMK1Q14012 370 aa16.01■□□□□ 0.15
VAMP1-207ENST00000539047 TFDP2Q14188 446 aa16.01■□□□□ 0.15
VAMP1-207ENST00000539047 PPP2R5DQ14738 602 aa16.01■□□□□ 0.15
VAMP1-207ENST00000539047 PPP6R3Q5H9R7 873 aaPredicted RBP16.01■□□□□ 0.15
VAMP1-207ENST00000539047 ACBD5Q5T8D3 534 aaPredicted RBP16.01■□□□□ 0.15
VAMP1-207ENST00000539047 OTUD1Q5VV17 481 aaPredicted RBP16.01■□□□□ 0.15
VAMP1-207ENST00000539047 KLHDC10Q6PID8 442 aa16.01■□□□□ 0.15
VAMP1-207ENST00000539047 ZNF572Q7Z3I7 529 aaPredicted RBP16.01■□□□□ 0.15
VAMP1-207ENST00000539047 BNIPLQ7Z465 357 aa16.01■□□□□ 0.15
VAMP1-207ENST00000539047 SLC13A5Q86YT5 568 aaPredicted RBP16.01■□□□□ 0.15
VAMP1-207ENST00000539047 DEFB123Q8N688 67 aa16.01■□□□□ 0.15
VAMP1-207ENST00000539047 CMASQ8NFW8 434 aaPredicted RBP16.01■□□□□ 0.15
VAMP1-207ENST00000539047 CASP10Q92851 521 aa16.01■□□□□ 0.15
VAMP1-207ENST00000539047 ACSF2Q96CM8 615 aaPredicted RBP16.01■□□□□ 0.15
VAMP1-207ENST00000539047 MRPL38Q96DV4 380 aaKnown RBP16.01■□□□□ 0.15
VAMP1-207ENST00000539047 ZNF670Q9BS34 389 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms